RNA–Protein interactions for RNA: ENST00000524277.1

SPARC-206, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 505 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-206ENST00000524277 MAMSTRQ6ZN01 415 aa12.88□□□□□ -0.35
SPARC-206ENST00000524277 DEPDC1BQ8WUY9 529 aa12.88□□□□□ -0.35
SPARC-206ENST00000524277 SMARCD2Q92925 531 aa12.88□□□□□ -0.35
SPARC-206ENST00000524277 ASB16Q96NS5 453 aa12.88□□□□□ -0.35
SPARC-206ENST00000524277 PLIN2Q99541 437 aa12.88□□□□□ -0.35
SPARC-206ENST00000524277 TRMT61BQ9BVS5 477 aaKnown RBP12.88□□□□□ -0.35
SPARC-206ENST00000524277 FAM126AQ9BYI3 521 aaPredicted RBP12.88□□□□□ -0.35
SPARC-206ENST00000524277 TRPV4Q9HBA0 871 aa12.88□□□□□ -0.35
SPARC-206ENST00000524277 SPATA6Q9NWH7 488 aaPredicted RBP12.88□□□□□ -0.35
SPARC-206ENST00000524277 HSFX1Q9UBD0 423 aa12.88□□□□□ -0.35
SPARC-206ENST00000524277 DERAQ9Y315 318 aa12.88□□□□□ -0.35
SPARC-206ENST00000524277 ASB3Q9Y575 518 aa12.88□□□□□ -0.35
SPARC-206ENST00000524277 ZNF292O60281 2723 aa12.88□□□□□ -0.35
SPARC-206ENST00000524277 NOTCH4Q99466 2003 aa12.88□□□□□ -0.35
SPARC-206ENST00000524277 WDR87Q6ZQQ6 2873 aa12.87□□□□□ -0.35
SPARC-206ENST00000524277 CACNA1IQ9P0X4 2223 aa12.87□□□□□ -0.35
SPARC-206ENST00000524277 LACTBL1A8MY62 500 aa12.87□□□□□ -0.35
SPARC-206ENST00000524277 MEFVO15553 781 aaPredicted RBP12.87□□□□□ -0.35
SPARC-206ENST00000524277 TRAK2O60296 914 aa12.87□□□□□ -0.35
SPARC-206ENST00000524277 KINO60870 393 aaKnown RBP12.87□□□□□ -0.35
SPARC-206ENST00000524277 FGF19O95750 216 aa12.87□□□□□ -0.35
SPARC-206ENST00000524277 KRT18P05783 430 aaKnown RBP12.87□□□□□ -0.35
SPARC-206ENST00000524277 PSMC3P17980 439 aa12.87□□□□□ -0.35
SPARC-206ENST00000524277 ALDH1A3P47895 512 aa12.87□□□□□ -0.35
SPARC-206ENST00000524277 ID4P47928 161 aa12.87□□□□□ -0.35
SPARC-206ENST00000524277 GTF2BQ00403 316 aa12.87□□□□□ -0.35
SPARC-206ENST00000524277 TWF1Q12792 350 aa12.87□□□□□ -0.35
SPARC-206ENST00000524277 GPR17Q13304 367 aa12.87□□□□□ -0.35
SPARC-206ENST00000524277 SPATA1Q5VX52 437 aa12.87□□□□□ -0.35
SPARC-206ENST00000524277 ARMCX5Q6P1M9 558 aa12.87□□□□□ -0.35
SPARC-206ENST00000524277 DSTYKQ6XUX3 929 aa12.87□□□□□ -0.35
SPARC-206ENST00000524277 GPBP1Q86WP2 473 aa12.87□□□□□ -0.35
SPARC-206ENST00000524277 ST13P5Q8NFI4 369 aaPredicted RBP12.87□□□□□ -0.35
SPARC-206ENST00000524277 RASSF8Q8NHQ8 419 aa12.87□□□□□ -0.35
SPARC-206ENST00000524277 RUBCNQ92622 972 aa12.87□□□□□ -0.35
SPARC-206ENST00000524277 MSANTD3Q96H12 275 aa12.87□□□□□ -0.35
SPARC-206ENST00000524277 REEP2Q9BRK0 252 aa12.87□□□□□ -0.35
SPARC-206ENST00000524277 ST6GALNAC4Q9H4F1 302 aa12.87□□□□□ -0.35
SPARC-206ENST00000524277 ASB7Q9H672 318 aa12.87□□□□□ -0.35
SPARC-206ENST00000524277 BRD9Q9H8M2 597 aa12.87□□□□□ -0.35
SPARC-206ENST00000524277 TUBGCP4Q9UGJ1 667 aa12.87□□□□□ -0.35
SPARC-206ENST00000524277 DSEQ9UL01 958 aa12.87□□□□□ -0.35
SPARC-206ENST00000524277 PCDHGA2Q9Y5H1 932 aa12.87□□□□□ -0.35
SPARC-206ENST00000524277 MYH15Q9Y2K3 1946 aa12.86□□□□□ -0.35
SPARC-206ENST00000524277 A0A0B4J269 797 aa12.86□□□□□ -0.35
SPARC-206ENST00000524277 K7ENM7 598 aa12.86□□□□□ -0.35
SPARC-206ENST00000524277 TBCAO75347 108 aaKnown RBP12.86□□□□□ -0.35
SPARC-206ENST00000524277 ODC1P11926 461 aa12.86□□□□□ -0.35
SPARC-206ENST00000524277 PDCP20941 246 aa12.86□□□□□ -0.35
SPARC-206ENST00000524277 DDIT3P35638 169 aa12.86□□□□□ -0.35
SPARC-206ENST00000524277 EPHB3P54753 998 aa12.86□□□□□ -0.35
SPARC-206ENST00000524277 PPP2R5DQ14738 602 aa12.86□□□□□ -0.35
SPARC-206ENST00000524277 SEZ6Q53EL9 994 aa12.86□□□□□ -0.35
SPARC-206ENST00000524277 FAM78AQ5JUQ0 283 aa12.86□□□□□ -0.35
SPARC-206ENST00000524277 OVOS1Q6IE37 1185 aa12.86□□□□□ -0.35
SPARC-206ENST00000524277 RNF19BQ6ZMZ0 732 aa12.86□□□□□ -0.35
SPARC-206ENST00000524277 TPRG1Q6ZUI0 275 aa12.86□□□□□ -0.35
SPARC-206ENST00000524277 MFSD6LQ8IWD5 586 aa12.86□□□□□ -0.35
SPARC-206ENST00000524277 GPR161Q8N6U8 529 aaKnown RBP12.86□□□□□ -0.35
SPARC-206ENST00000524277 ATRIPQ8WXE1 791 aa12.86□□□□□ -0.35
SPARC-206ENST00000524277 RAD54LQ92698 747 aa12.86□□□□□ -0.35
SPARC-206ENST00000524277 MSTO1Q9BUK6 570 aa12.86□□□□□ -0.35
SPARC-206ENST00000524277 PLA2G2FQ9BZM2 168 aa12.86□□□□□ -0.35
SPARC-206ENST00000524277 CCSER1Q9C0I3 900 aa12.86□□□□□ -0.35
SPARC-206ENST00000524277 HAPLN2Q9GZV7 340 aa12.86□□□□□ -0.35
SPARC-206ENST00000524277 CEP72Q9P209 647 aa12.86□□□□□ -0.35
SPARC-206ENST00000524277 R4GN57 208 aa12.86□□□□□ -0.35
SPARC-206ENST00000524277 MYH11P35749 1972 aa12.86□□□□□ -0.35
SPARC-206ENST00000524277 NPHP3-ACAD11A0A0J9YXS1 232 aa12.85□□□□□ -0.35
SPARC-206ENST00000524277 FAM189A1O60320 539 aa12.85□□□□□ -0.35
SPARC-206ENST00000524277 FCARP24071 287 aa12.85□□□□□ -0.35
SPARC-206ENST00000524277 LILRA4P59901 499 aa12.85□□□□□ -0.35
SPARC-206ENST00000524277 CACNB1Q02641 598 aaPredicted RBP12.85□□□□□ -0.35
SPARC-206ENST00000524277 SMARCB1Q12824 385 aa12.85□□□□□ -0.35
SPARC-206ENST00000524277 POSTNQ15063 836 aa12.85□□□□□ -0.35
SPARC-206ENST00000524277 ENOX2Q16206 610 aaKnown RBP12.85□□□□□ -0.35
SPARC-206ENST00000524277 ITIH5Q86UX2 942 aa12.85□□□□□ -0.35
SPARC-206ENST00000524277 NT5DC4Q86YG4 428 aa12.85□□□□□ -0.35
SPARC-206ENST00000524277 MAP4K3Q8IVH8 894 aa12.85□□□□□ -0.35
SPARC-206ENST00000524277 MAML2Q8IZL2 1156 aaPredicted RBP12.85□□□□□ -0.35
SPARC-206ENST00000524277 KRI1Q8N9T8 703 aaKnown RBP12.85□□□□□ -0.35
SPARC-206ENST00000524277 LARP4BQ92615 738 aaKnown RBP12.85□□□□□ -0.35
SPARC-206ENST00000524277 SECISBP2LQ93073 1101 aaKnown RBP12.85□□□□□ -0.35
SPARC-206ENST00000524277 HVCN1Q96D96 273 aa12.85□□□□□ -0.35
SPARC-206ENST00000524277 TCEAL4Q96EI5 215 aa12.85□□□□□ -0.35
SPARC-206ENST00000524277 ZNF334Q9HCZ1 680 aaPredicted RBP12.85□□□□□ -0.35
SPARC-206ENST00000524277 HEBP1Q9NRV9 189 aa12.85□□□□□ -0.35
SPARC-206ENST00000524277 BLOC1S4Q9NUP1 217 aa12.85□□□□□ -0.35
SPARC-206ENST00000524277 ZSCAN32Q9NX65 697 aa12.85□□□□□ -0.35
SPARC-206ENST00000524277 CCDC39Q9UFE4 941 aa12.85□□□□□ -0.35
SPARC-206ENST00000524277 ZMYM5Q9UJ78 669 aa12.85□□□□□ -0.35
SPARC-206ENST00000524277 CPSF3Q9UKF6 684 aaKnown RBP12.85□□□□□ -0.35
SPARC-206ENST00000524277 C2CD2Q9Y426 696 aa12.85□□□□□ -0.35
SPARC-206ENST00000524277 YIPF1Q9Y548 306 aa12.85□□□□□ -0.35
SPARC-206ENST00000524277 F5P12259 2224 aa12.85□□□□□ -0.35
SPARC-206ENST00000524277 ZNF263O14978 683 aa12.84□□□□□ -0.35
SPARC-206ENST00000524277 LRRN2O75325 713 aa12.84□□□□□ -0.35
SPARC-206ENST00000524277 CYP11A1P05108 521 aa12.84□□□□□ -0.35
SPARC-206ENST00000524277 MYL4P12829 197 aa12.84□□□□□ -0.35
SPARC-206ENST00000524277 PLCG1P19174 1290 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms