RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-223ENST00000524033 ZNF236Q9UL36 1845 aa8.38□□□□□ -1.07
SPIDR-223ENST00000524033 A0A0G2JMZ2 1700 aa8.38□□□□□ -1.07
SPIDR-223ENST00000524033 TMCO5BA8MYB1 307 aa8.38□□□□□ -1.07
SPIDR-223ENST00000524033 KRIT1O00522 736 aa8.38□□□□□ -1.07
SPIDR-223ENST00000524033 DLL1O00548 723 aa8.38□□□□□ -1.07
SPIDR-223ENST00000524033 NFIBO00712 420 aa8.38□□□□□ -1.07
SPIDR-223ENST00000524033 MEIS2O14770 477 aa8.38□□□□□ -1.07
SPIDR-223ENST00000524033 TLR3O15455 904 aaKnown RBP8.38□□□□□ -1.07
SPIDR-223ENST00000524033 TGFB1I1O43294 461 aa8.38□□□□□ -1.07
SPIDR-223ENST00000524033 BUB1BO60566 1050 aaPredicted RBP8.38□□□□□ -1.07
SPIDR-223ENST00000524033 EYA4O95677 639 aa8.38□□□□□ -1.07
SPIDR-223ENST00000524033 SMPD1P17405 629 aa8.38□□□□□ -1.07
SPIDR-223ENST00000524033 GAP43P17677 238 aa8.38□□□□□ -1.07
SPIDR-223ENST00000524033 FSHRP23945 695 aa8.38□□□□□ -1.07
SPIDR-223ENST00000524033 HPDP32754 393 aaPredicted RBP8.38□□□□□ -1.07
SPIDR-223ENST00000524033 SOX5P35711 763 aa8.38□□□□□ -1.07
SPIDR-223ENST00000524033 PTGIRP43119 386 aa8.38□□□□□ -1.07
SPIDR-223ENST00000524033 MMP13P45452 471 aa8.38□□□□□ -1.07
SPIDR-223ENST00000524033 CASP4P49662 377 aa8.38□□□□□ -1.07
SPIDR-223ENST00000524033 MNAT1P51948 309 aa8.38□□□□□ -1.07
SPIDR-223ENST00000524033 RNASE9P60153 205 aaKnown RBP8.38□□□□□ -1.07
SPIDR-223ENST00000524033 MAGOHP61326 146 aaKnown RBP8.38□□□□□ -1.07
SPIDR-223ENST00000524033 ARID5AQ03989 594 aa8.38□□□□□ -1.07
SPIDR-223ENST00000524033 DHX34Q14147 1143 aaKnown RBP8.38□□□□□ -1.07
SPIDR-223ENST00000524033 SKIDA1Q1XH10 827 aa8.38□□□□□ -1.07
SPIDR-223ENST00000524033 QRICH1Q2TAL8 776 aa8.38□□□□□ -1.07
SPIDR-223ENST00000524033 ZNF568Q3ZCX4 644 aa8.38□□□□□ -1.07
SPIDR-223ENST00000524033 CXCL17Q6UXB2 119 aa8.38□□□□□ -1.07
SPIDR-223ENST00000524033 CATSPER3Q86XQ3 398 aa8.38□□□□□ -1.07
SPIDR-223ENST00000524033 FBXO16Q8IX29 292 aaPredicted RBP8.38□□□□□ -1.07
SPIDR-223ENST00000524033 CACNA2D3Q8IZS8 1091 aa8.38□□□□□ -1.07
SPIDR-223ENST00000524033 FUKQ8N0W3 1084 aa8.38□□□□□ -1.07
SPIDR-223ENST00000524033 TMEM199Q8N511 208 aa8.38□□□□□ -1.07
SPIDR-223ENST00000524033 MORC4Q8TE76 937 aa8.38□□□□□ -1.07
SPIDR-223ENST00000524033 MAGOHBQ96A72 148 aaKnown RBP8.38□□□□□ -1.07
SPIDR-223ENST00000524033 PGM2Q96G03 612 aa8.38□□□□□ -1.07
SPIDR-223ENST00000524033 SGSM3Q96HU1 749 aa8.38□□□□□ -1.07
SPIDR-223ENST00000524033 GUCD1Q96NT3 240 aa8.38□□□□□ -1.07
SPIDR-223ENST00000524033 FIZ1Q96SL8 496 aa8.38□□□□□ -1.07
SPIDR-223ENST00000524033 TRIM51Q9BSJ1 452 aa8.38□□□□□ -1.07
SPIDR-223ENST00000524033 POLR3CQ9BUI4 534 aaPredicted RBP8.38□□□□□ -1.07
SPIDR-223ENST00000524033 WDR11Q9BZH6 1224 aa8.38□□□□□ -1.07
SPIDR-223ENST00000524033 RAB17Q9H0T7 212 aa8.38□□□□□ -1.07
SPIDR-223ENST00000524033 PSTPIP2Q9H939 334 aa8.38□□□□□ -1.07
SPIDR-223ENST00000524033 VTA1Q9NP79 307 aa8.38□□□□□ -1.07
SPIDR-223ENST00000524033 DMAC2Q9NW81 257 aa8.38□□□□□ -1.07
SPIDR-223ENST00000524033 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.38□□□□□ -1.077e-6■■■■□ 20.5
SPIDR-223ENST00000524033 GRHL1Q9NZI5 618 aa8.38□□□□□ -1.07
SPIDR-223ENST00000524033 GCNT4Q9P109 453 aa8.38□□□□□ -1.07
SPIDR-223ENST00000524033 AMACRQ9UHK6 382 aa8.38□□□□□ -1.07
SPIDR-223ENST00000524033 AMFRQ9UKV5 643 aa8.38□□□□□ -1.07
SPIDR-223ENST00000524033 VAV3Q9UKW4 847 aa8.38□□□□□ -1.07
SPIDR-223ENST00000524033 TBX21Q9UL17 535 aa8.38□□□□□ -1.07
SPIDR-223ENST00000524033 TPX2Q9ULW0 747 aaKnown RBP8.38□□□□□ -1.07
SPIDR-223ENST00000524033 NOVA2Q9UNW9 492 aaKnown RBP8.38□□□□□ -1.07
SPIDR-223ENST00000524033 NOD1Q9Y239 953 aa8.38□□□□□ -1.07
SPIDR-223ENST00000524033 Q9Y3F1 56 aa8.38□□□□□ -1.07
SPIDR-223ENST00000524033 PCDHA3Q9Y5H8 950 aa8.38□□□□□ -1.07
SPIDR-223ENST00000524033 SMCHD1A6NHR9 2005 aa8.37□□□□□ -1.07
SPIDR-223ENST00000524033 RLFQ13129 1914 aa8.37□□□□□ -1.07
SPIDR-223ENST00000524033 LOC102724159A0A0B4J2E5 919 aa8.37□□□□□ -1.07
SPIDR-223ENST00000524033 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.37□□□□□ -1.07
SPIDR-223ENST00000524033 GOLGA6L7A0A1B0GV03 622 aa8.37□□□□□ -1.07
SPIDR-223ENST00000524033 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.37□□□□□ -1.07
SPIDR-223ENST00000524033 KIAA0391O15091 583 aaKnown RBP8.37□□□□□ -1.07
SPIDR-223ENST00000524033 ASAP2O43150 1006 aa8.37□□□□□ -1.07
SPIDR-223ENST00000524033 MGRN1O60291 552 aa8.37□□□□□ -1.07
SPIDR-223ENST00000524033 LZTS3O60299 673 aaPredicted RBP8.37□□□□□ -1.07
SPIDR-223ENST00000524033 MTA2O94776 668 aa8.37□□□□□ -1.07
SPIDR-223ENST00000524033 OAS1P00973 400 aaKnown RBP8.37□□□□□ -1.07
SPIDR-223ENST00000524033 SSBP05455 408 aaKnown RBP eCLIP8.37□□□□□ -1.07
SPIDR-223ENST00000524033 TMOD1P28289 359 aa8.37□□□□□ -1.07
SPIDR-223ENST00000524033 SREBF1P36956 1147 aa8.37□□□□□ -1.07
SPIDR-223ENST00000524033 STAT1P42224 750 aa8.37□□□□□ -1.07
SPIDR-223ENST00000524033 SCTRP47872 440 aa8.37□□□□□ -1.07
SPIDR-223ENST00000524033 PSMC6P62333 389 aa8.37□□□□□ -1.07
SPIDR-223ENST00000524033 ARHGAP4P98171 946 aa8.37□□□□□ -1.07
SPIDR-223ENST00000524033 DHX9Q08211 1270 aaKnown RBP8.37□□□□□ -1.07
SPIDR-223ENST00000524033 IFFO1Q0D2I5 559 aa8.37□□□□□ -1.07
SPIDR-223ENST00000524033 ITGA7Q13683 1181 aa8.37□□□□□ -1.07
SPIDR-223ENST00000524033 ITIH4Q14624 930 aa8.37□□□□□ -1.07
SPIDR-223ENST00000524033 PWP2Q15269 919 aaKnown RBP8.37□□□□□ -1.07
SPIDR-223ENST00000524033 CLUL1Q15846 466 aa8.37□□□□□ -1.07
SPIDR-223ENST00000524033 CYP1B1Q16678 543 aa8.37□□□□□ -1.07
SPIDR-223ENST00000524033 KRT71Q3SY84 523 aa8.37□□□□□ -1.07
SPIDR-223ENST00000524033 DUSP28Q4G0W2 176 aa8.37□□□□□ -1.07
SPIDR-223ENST00000524033 TMEM63BQ5T3F8 832 aa8.37□□□□□ -1.07
SPIDR-223ENST00000524033 RNF187Q5TA31 235 aaPredicted RBP8.37□□□□□ -1.07
SPIDR-223ENST00000524033 C11orf63Q6NUN7 778 aa8.37□□□□□ -1.07
SPIDR-223ENST00000524033 TLDC1Q6P9B6 456 aa8.37□□□□□ -1.07
SPIDR-223ENST00000524033 CYB5D1Q6P9G0 228 aa8.37□□□□□ -1.07
SPIDR-223ENST00000524033 GJB7Q6PEY0 223 aa8.37□□□□□ -1.07
SPIDR-223ENST00000524033 RNF207Q6ZRF8 634 aa8.37□□□□□ -1.07
SPIDR-223ENST00000524033 C16orf59Q7L2K0 433 aa8.37□□□□□ -1.07
SPIDR-223ENST00000524033 PIGWQ7Z7B1 504 aa8.37□□□□□ -1.07
SPIDR-223ENST00000524033 VPS36Q86VN1 386 aa8.37□□□□□ -1.07
SPIDR-223ENST00000524033 HOOK3Q86VS8 718 aa8.37□□□□□ -1.07
SPIDR-223ENST00000524033 DNAAF5Q86Y56 855 aa8.37□□□□□ -1.07
SPIDR-223ENST00000524033 CCDC50Q8IVM0 306 aa8.37□□□□□ -1.07
SPIDR-223ENST00000524033 SLC43A3Q8NBI5 491 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms