RNA–Protein interactions for RNA: ENST00000523896.1

PCM1-220, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-220ENST00000523896 ZMAT3Q9HA38 289 aaKnown RBP4.81□□□□□ -1.64
PCM1-220ENST00000523896 ATP6V0A4Q9HBG4 840 aa4.81□□□□□ -1.64
PCM1-220ENST00000523896 SARS2Q9NP81 518 aaKnown RBP4.81□□□□□ -1.64
PCM1-220ENST00000523896 RLIMQ9NVW2 624 aa4.81□□□□□ -1.64
PCM1-220ENST00000523896 FBXO34Q9NWN3 711 aa4.81□□□□□ -1.64
PCM1-220ENST00000523896 JKAMPQ9P055 326 aa4.81□□□□□ -1.64
PCM1-220ENST00000523896 CEP72Q9P209 647 aa4.81□□□□□ -1.64
PCM1-220ENST00000523896 ZDHHC8Q9ULC8 765 aa4.81□□□□□ -1.64
PCM1-220ENST00000523896 A0A087X1B8 175 aa4.8□□□□□ -1.64
PCM1-220ENST00000523896 ANO9A1A5B4 782 aa4.8□□□□□ -1.64
PCM1-220ENST00000523896 KLRG2A4D1S0 409 aaPredicted RBP4.8□□□□□ -1.64
PCM1-220ENST00000523896 MATN4O95460 622 aa4.8□□□□□ -1.64
PCM1-220ENST00000523896 ANXA1P04083 346 aa4.8□□□□□ -1.64
PCM1-220ENST00000523896 GNAI3P08754 354 aa4.8□□□□□ -1.64
PCM1-220ENST00000523896 HK1P19367 917 aa4.8□□□□□ -1.64
PCM1-220ENST00000523896 GNAI1P63096 354 aa4.8□□□□□ -1.64
PCM1-220ENST00000523896 POLD3Q15054 466 aaPredicted RBP4.8□□□□□ -1.64
PCM1-220ENST00000523896 SAFBQ15424 915 aaKnown RBP eCLIP4.8□□□□□ -1.64
PCM1-220ENST00000523896 KIAA0753Q2KHM9 967 aa4.8□□□□□ -1.64
PCM1-220ENST00000523896 COBLL1Q53SF7 1204 aa4.8□□□□□ -1.64
PCM1-220ENST00000523896 IGFL4Q6B9Z1 124 aa4.8□□□□□ -1.64
PCM1-220ENST00000523896 PPP4R4Q6NUP7 873 aa4.8□□□□□ -1.64
PCM1-220ENST00000523896 APOA5Q6Q788 366 aa4.8□□□□□ -1.64
PCM1-220ENST00000523896 COL23A1Q86Y22 540 aaPredicted RBP4.8□□□□□ -1.64
PCM1-220ENST00000523896 PGBD4Q96DM1 585 aa4.8□□□□□ -1.64
PCM1-220ENST00000523896 MRGPRX1Q96LB2 322 aa4.8□□□□□ -1.64
PCM1-220ENST00000523896 NT5C1BQ96P26 610 aa4.8□□□□□ -1.64
PCM1-220ENST00000523896 C22orf23Q9BZE7 217 aa4.8□□□□□ -1.64
PCM1-220ENST00000523896 NRDE2Q9H7Z3 1164 aa4.8□□□□□ -1.64
PCM1-220ENST00000523896 SLC2A4RGQ9NR83 387 aa4.8□□□□□ -1.64
PCM1-220ENST00000523896 CNNM1Q9NRU3 951 aa4.8□□□□□ -1.64
PCM1-220ENST00000523896 SLC52A1Q9NWF4 448 aa4.8□□□□□ -1.64
PCM1-220ENST00000523896 CFAP97Q9P2B7 532 aa4.8□□□□□ -1.64
PCM1-220ENST00000523896 STAP2Q9UGK3 403 aa4.8□□□□□ -1.64
PCM1-220ENST00000523896 PCDHA1Q9Y5I3 950 aa4.8□□□□□ -1.64
PCM1-220ENST00000523896 A0A1W2PPL8 197 aa4.79□□□□□ -1.64
PCM1-220ENST00000523896 TMEM191CA6NGB0 347 aa4.79□□□□□ -1.64
PCM1-220ENST00000523896 DRGXA6NNA5 263 aa4.79□□□□□ -1.64
PCM1-220ENST00000523896 APAF1O14727 1248 aa4.79□□□□□ -1.64
PCM1-220ENST00000523896 PPFIA2O75334 1257 aa4.79□□□□□ -1.64
PCM1-220ENST00000523896 RPS6KA4O75676 772 aa4.79□□□□□ -1.64
PCM1-220ENST00000523896 RECQL4O94761 1208 aa4.79□□□□□ -1.64
PCM1-220ENST00000523896 NPR1P16066 1061 aa4.79□□□□□ -1.64
PCM1-220ENST00000523896 PEX2P28328 305 aa4.79□□□□□ -1.64
PCM1-220ENST00000523896 INHBEP58166 350 aa4.79□□□□□ -1.64
PCM1-220ENST00000523896 KIF22Q14807 665 aa4.79□□□□□ -1.64
PCM1-220ENST00000523896 MRGPRGQ86SM5 289 aa4.79□□□□□ -1.64
PCM1-220ENST00000523896 PDSS2Q86YH6 399 aa4.79□□□□□ -1.64
PCM1-220ENST00000523896 SYT12Q8IV01 421 aa4.79□□□□□ -1.64
PCM1-220ENST00000523896 FITM2Q8N6M3 262 aa4.79□□□□□ -1.64
PCM1-220ENST00000523896 AOPEPQ8N6M6 819 aa4.79□□□□□ -1.64
PCM1-220ENST00000523896 ANKS1AQ92625 1134 aa4.79□□□□□ -1.64
PCM1-220ENST00000523896 HAS1Q92839 578 aa4.79□□□□□ -1.64
PCM1-220ENST00000523896 MNTQ99583 582 aa4.79□□□□□ -1.64
PCM1-220ENST00000523896 PRRX2Q99811 253 aa4.79□□□□□ -1.64
PCM1-220ENST00000523896 GSTO2Q9H4Y5 243 aa4.79□□□□□ -1.64
PCM1-220ENST00000523896 BRD9Q9H8M2 597 aa4.79□□□□□ -1.64
PCM1-220ENST00000523896 POGKQ9P215 609 aa4.79□□□□□ -1.64
PCM1-220ENST00000523896 C11orf21Q9P2W6 132 aa4.79□□□□□ -1.64
PCM1-220ENST00000523896 CFAP69A5D8W1 941 aa4.78□□□□□ -1.64
PCM1-220ENST00000523896 CDHR4A6H8M9 788 aa4.78□□□□□ -1.64
PCM1-220ENST00000523896 PRSS29PA6NIE9 313 aa4.78□□□□□ -1.64
PCM1-220ENST00000523896 OVOL3O00110 214 aa4.78□□□□□ -1.64
PCM1-220ENST00000523896 MGEA5O60502 916 aa4.78□□□□□ -1.64
PCM1-220ENST00000523896 RAMP2O60895 175 aa4.78□□□□□ -1.64
PCM1-220ENST00000523896 FAM20BO75063 409 aa4.78□□□□□ -1.64
PCM1-220ENST00000523896 AHSGP02765 367 aa4.78□□□□□ -1.64
PCM1-220ENST00000523896 ITGB1P05556 798 aa4.78□□□□□ -1.64
PCM1-220ENST00000523896 GJB1P08034 283 aa4.78□□□□□ -1.64
PCM1-220ENST00000523896 RARBP10826 455 aa4.78□□□□□ -1.64
PCM1-220ENST00000523896 GCSHP23434 173 aa4.78□□□□□ -1.64
PCM1-220ENST00000523896 SLC6A2P23975 617 aa4.78□□□□□ -1.64
PCM1-220ENST00000523896 SOX8P57073 446 aa4.78□□□□□ -1.64
PCM1-220ENST00000523896 SMN1Q16637 294 aaKnown RBP4.78□□□□□ -1.64
PCM1-220ENST00000523896 RABL3Q5HYI8 236 aa4.78□□□□□ -1.64
PCM1-220ENST00000523896 KHDC1LQ5JSQ8 128 aa4.78□□□□□ -1.64
PCM1-220ENST00000523896 MED25Q71SY5 747 aa4.78□□□□□ -1.64
PCM1-220ENST00000523896 C11orf96Q7Z7L8 435 aa4.78□□□□□ -1.64
PCM1-220ENST00000523896 KRT78Q8N1N4 520 aa4.78□□□□□ -1.64
PCM1-220ENST00000523896 CELF5Q8N6W0 485 aaKnown RBP4.78□□□□□ -1.64
PCM1-220ENST00000523896 IL31RAQ8NI17 732 aa4.78□□□□□ -1.64
PCM1-220ENST00000523896 SLC25A43Q8WUT9 341 aaPredicted RBP4.78□□□□□ -1.64
PCM1-220ENST00000523896 TNPO1Q92973 898 aaKnown RBP4.78□□□□□ -1.64
PCM1-220ENST00000523896 ZNF700Q9H0M5 742 aa4.78□□□□□ -1.64
PCM1-220ENST00000523896 PIH1D1Q9NWS0 290 aaKnown RBP4.78□□□□□ -1.64
PCM1-220ENST00000523896 CPA4Q9UI42 421 aa4.78□□□□□ -1.64
PCM1-220ENST00000523896 FAM50BQ9Y247 325 aa4.78□□□□□ -1.64
PCM1-220ENST00000523896 MED16Q9Y2X0 877 aa4.78□□□□□ -1.64
PCM1-220ENST00000523896 ISM1B1AKI9 464 aa4.77□□□□□ -1.65
PCM1-220ENST00000523896 DIRC3C9JPN6 131 aa4.77□□□□□ -1.65
PCM1-220ENST00000523896 MYO1FO00160 1098 aa4.77□□□□□ -1.65
PCM1-220ENST00000523896 PMM2O15305 246 aa4.77□□□□□ -1.65
PCM1-220ENST00000523896 MAP4K4O95819 1239 aaPredicted RBP4.77□□□□□ -1.65
PCM1-220ENST00000523896 NBPF7P0C2Y1 421 aaPredicted RBP4.77□□□□□ -1.65
PCM1-220ENST00000523896 SLC5A1P13866 664 aa4.77□□□□□ -1.65
PCM1-220ENST00000523896 CHN2P52757 468 aa4.77□□□□□ -1.65
PCM1-220ENST00000523896 EXOSC9Q06265 439 aaKnown RBP4.77□□□□□ -1.65
PCM1-220ENST00000523896 HDAC1Q13547 482 aaPredicted RBP4.77□□□□□ -1.65
PCM1-220ENST00000523896 TOB2Q14106 344 aaPredicted RBP4.77□□□□□ -1.65
PCM1-220ENST00000523896 UBE4AQ14139 1066 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms