RNA–Protein interactions for RNA: ENST00000523549.1

NSMCE2-211, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-211ENST00000523549 FPGT-TNNI3KV9GXZ4 949 aa5.43□□□□□ -1.54
NSMCE2-211ENST00000523549 WNK3Q9BYP7 1800 aa5.43□□□□□ -1.54
NSMCE2-211ENST00000523549 PIK3C2AO00443 1686 aa5.43□□□□□ -1.54
NSMCE2-211ENST00000523549 SALL3Q9BXA9 1300 aa5.43□□□□□ -1.54
NSMCE2-211ENST00000523549 MKI67P46013 3256 aaKnown RBP5.42□□□□□ -1.54
NSMCE2-211ENST00000523549 DRGXA6NNA5 263 aa5.42□□□□□ -1.54
NSMCE2-211ENST00000523549 CFIP05156 583 aa5.42□□□□□ -1.54
NSMCE2-211ENST00000523549 SPATA31D3P0C874 917 aa5.42□□□□□ -1.54
NSMCE2-211ENST00000523549 CTSSP25774 331 aa5.42□□□□□ -1.54
NSMCE2-211ENST00000523549 ELLP55199 621 aaPredicted RBP5.42□□□□□ -1.54
NSMCE2-211ENST00000523549 TCEA2Q15560 299 aa5.42□□□□□ -1.54
NSMCE2-211ENST00000523549 ERCC6LQ2NKX8 1250 aa5.42□□□□□ -1.54
NSMCE2-211ENST00000523549 ZNF362Q5T0B9 420 aaPredicted RBP5.42□□□□□ -1.54
NSMCE2-211ENST00000523549 AGAP9Q5VTM2 703 aa5.42□□□□□ -1.54
NSMCE2-211ENST00000523549 ARMC6Q6NXE6 501 aa5.42□□□□□ -1.54
NSMCE2-211ENST00000523549 SPATA31D4Q6ZUB0 917 aa5.42□□□□□ -1.54
NSMCE2-211ENST00000523549 FRMD7Q6ZUT3 714 aa5.42□□□□□ -1.54
NSMCE2-211ENST00000523549 KRT28Q7Z3Y7 464 aa5.42□□□□□ -1.54
NSMCE2-211ENST00000523549 RNF169Q8NCN4 708 aa5.42□□□□□ -1.54
NSMCE2-211ENST00000523549 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.42□□□□□ -1.54
NSMCE2-211ENST00000523549 SLC9A6Q92581 669 aa5.42□□□□□ -1.54
NSMCE2-211ENST00000523549 TFAP2CQ92754 450 aa5.42□□□□□ -1.54
NSMCE2-211ENST00000523549 RNPC3Q96LT9 517 aaKnown RBP5.42□□□□□ -1.54
NSMCE2-211ENST00000523549 USP15Q9Y4E8 981 aaPredicted RBP5.42□□□□□ -1.54
NSMCE2-211ENST00000523549 KAT6BQ8WYB5 2073 aa5.42□□□□□ -1.54
NSMCE2-211ENST00000523549 LTBP1Q14766 1721 aa5.42□□□□□ -1.54
NSMCE2-211ENST00000523549 IGSF1Q8N6C5 1336 aa5.42□□□□□ -1.54
NSMCE2-211ENST00000523549 LAMB4A4D0S4 1761 aa5.42□□□□□ -1.54
NSMCE2-211ENST00000523549 N4BP2Q86UW6 1770 aaPredicted RBP5.42□□□□□ -1.54
NSMCE2-211ENST00000523549 BTAF1O14981 1849 aa5.41□□□□□ -1.54
NSMCE2-211ENST00000523549 SBF1O95248 1867 aa5.41□□□□□ -1.54
NSMCE2-211ENST00000523549 ELANEP08246 267 aa5.41□□□□□ -1.54
NSMCE2-211ENST00000523549 MPP3Q13368 585 aa5.41□□□□□ -1.54
NSMCE2-211ENST00000523549 BOLLQ8N9W6 283 aaKnown RBP5.41□□□□□ -1.54
NSMCE2-211ENST00000523549 OR14C36Q8NHC7 312 aa5.41□□□□□ -1.54
NSMCE2-211ENST00000523549 MDM1Q8TC05 714 aa5.41□□□□□ -1.54
NSMCE2-211ENST00000523549 UBXN4Q92575 508 aa5.41□□□□□ -1.54
NSMCE2-211ENST00000523549 NELL1Q92832 810 aa5.41□□□□□ -1.54
NSMCE2-211ENST00000523549 DRC1Q96MC2 740 aa5.41□□□□□ -1.54
NSMCE2-211ENST00000523549 PIF1Q9H611 641 aa5.41□□□□□ -1.54
NSMCE2-211ENST00000523549 CD2APQ9Y5K6 639 aa5.41□□□□□ -1.54
NSMCE2-211ENST00000523549 PNPLA7Q6ZV29 1317 aa5.41□□□□□ -1.54
NSMCE2-211ENST00000523549 ALS2Q96Q42 1657 aa5.4□□□□□ -1.54
NSMCE2-211ENST00000523549 CEP290O15078 2479 aa5.4□□□□□ -1.54
NSMCE2-211ENST00000523549 TRPM3Q9HCF6 1732 aaPredicted RBP5.4□□□□□ -1.54
NSMCE2-211ENST00000523549 LSSP48449 732 aa5.4□□□□□ -1.54
NSMCE2-211ENST00000523549 OCRLQ01968 901 aa5.4□□□□□ -1.54
NSMCE2-211ENST00000523549 SEPT7Q16181 437 aaKnown RBP5.4□□□□□ -1.54
NSMCE2-211ENST00000523549 DDB1Q16531 1140 aa5.4□□□□□ -1.54
NSMCE2-211ENST00000523549 C21orf62-AS1Q17RA5 79 aa5.4□□□□□ -1.54
NSMCE2-211ENST00000523549 FAM47AQ5JRC9 791 aa5.4□□□□□ -1.54
NSMCE2-211ENST00000523549 PITRM1Q5JRX3 1037 aa5.4□□□□□ -1.54
NSMCE2-211ENST00000523549 PAPD7Q5XG87 772 aaKnown RBP5.4□□□□□ -1.54
NSMCE2-211ENST00000523549 GPR149Q86SP6 731 aa5.4□□□□□ -1.54
NSMCE2-211ENST00000523549 HOMER1Q86YM7 354 aa5.4□□□□□ -1.54
NSMCE2-211ENST00000523549 ZFP28Q8NHY6 868 aa5.4□□□□□ -1.54
NSMCE2-211ENST00000523549 SLC35B2Q8TB61 432 aa5.4□□□□□ -1.54
NSMCE2-211ENST00000523549 NINJ1Q92982 152 aa5.4□□□□□ -1.54
NSMCE2-211ENST00000523549 GPR101Q96P66 508 aaPredicted RBP5.4□□□□□ -1.54
NSMCE2-211ENST00000523549 RSAD1Q9HA92 442 aa5.4□□□□□ -1.54
NSMCE2-211ENST00000523549 SLC52A1Q9NWF4 448 aa5.4□□□□□ -1.54
NSMCE2-211ENST00000523549 CDY2AQ9Y6F7 541 aa5.4□□□□□ -1.54
NSMCE2-211ENST00000523549 NHSQ6T4R5 1651 aa5.4□□□□□ -1.55
NSMCE2-211ENST00000523549 QRICH2Q9H0J4 1663 aa5.4□□□□□ -1.55
NSMCE2-211ENST00000523549 KIAA1551Q9HCM1 1747 aa5.4□□□□□ -1.55
NSMCE2-211ENST00000523549 IQGAP3Q86VI3 1631 aa5.39□□□□□ -1.55
NSMCE2-211ENST00000523549 PJA2O43164 708 aa5.39□□□□□ -1.55
NSMCE2-211ENST00000523549 PRAMEF4O60810 478 aa5.39□□□□□ -1.55
NSMCE2-211ENST00000523549 CDK4P11802 303 aa5.39□□□□□ -1.55
NSMCE2-211ENST00000523549 CRHR1P34998 444 aa5.39□□□□□ -1.55
NSMCE2-211ENST00000523549 ADCYAP1R1P41586 468 aa5.39□□□□□ -1.55
NSMCE2-211ENST00000523549 FLT3LGP49771 235 aa5.39□□□□□ -1.55
NSMCE2-211ENST00000523549 NHLH1Q02575 133 aa5.39□□□□□ -1.55
NSMCE2-211ENST00000523549 ZNF169Q14929 603 aaPredicted RBP5.39□□□□□ -1.55
NSMCE2-211ENST00000523549 PRAMEF14Q5SWL7 426 aa5.39□□□□□ -1.55
NSMCE2-211ENST00000523549 RHOT2Q8IXI1 618 aa5.39□□□□□ -1.55
NSMCE2-211ENST00000523549 TMEM132CQ8N3T6 1108 aa5.39□□□□□ -1.55
NSMCE2-211ENST00000523549 CAGE1Q8TC20 777 aa5.39□□□□□ -1.55
NSMCE2-211ENST00000523549 SNX27Q96L92 541 aa5.39□□□□□ -1.55
NSMCE2-211ENST00000523549 KCNG1Q9UIX4 513 aa5.39□□□□□ -1.55
NSMCE2-211ENST00000523549 FRMD4BQ9Y2L6 1034 aa5.39□□□□□ -1.55
NSMCE2-211ENST00000523549 PLEKHG2Q9H7P9 1386 aa5.39□□□□□ -1.55
NSMCE2-211ENST00000523549 KIF15Q9NS87 1388 aa5.39□□□□□ -1.55
NSMCE2-211ENST00000523549 COL3A1P02461 1466 aaPredicted RBP5.39□□□□□ -1.55
NSMCE2-211ENST00000523549 THSD7BQ9C0I4 1608 aa5.38□□□□□ -1.55
NSMCE2-211ENST00000523549 CDKL5O76039 1030 aa5.38□□□□□ -1.55
NSMCE2-211ENST00000523549 FOSP01100 380 aaPredicted RBP5.38□□□□□ -1.55
NSMCE2-211ENST00000523549 IGLV2-14P01704 120 aa5.38□□□□□ -1.55
NSMCE2-211ENST00000523549 ITGAMP11215 1152 aa5.38□□□□□ -1.55
NSMCE2-211ENST00000523549 RARRES1P49788 294 aa5.38□□□□□ -1.55
NSMCE2-211ENST00000523549 SCNN1BP51168 640 aa5.38□□□□□ -1.55
NSMCE2-211ENST00000523549 CHN2P52757 468 aa5.38□□□□□ -1.55
NSMCE2-211ENST00000523549 CLRN1P58418 232 aa5.38□□□□□ -1.55
NSMCE2-211ENST00000523549 TKFCQ3LXA3 575 aa5.38□□□□□ -1.55
NSMCE2-211ENST00000523549 BROXQ5VW32 411 aa5.38□□□□□ -1.55
NSMCE2-211ENST00000523549 B3GNTL1Q67FW5 361 aaPredicted RBP5.38□□□□□ -1.55
NSMCE2-211ENST00000523549 CNNM4Q6P4Q7 775 aa5.38□□□□□ -1.55
NSMCE2-211ENST00000523549 C16orf86Q6ZW13 317 aa5.38□□□□□ -1.55
NSMCE2-211ENST00000523549 PDZD4Q76G19 769 aaPredicted RBP5.38□□□□□ -1.55
NSMCE2-211ENST00000523549 APPBP2Q92624 585 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms