RNA–Protein interactions for RNA: ENST00000523062.1

CSMD1-211, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 3

Gene CSMD1, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-211ENST00000523062 TOPORSQ9NS56 1045 aaPredicted RBP7.39□□□□□ -1.23
CSMD1-211ENST00000523062 RBAKQ9NYW8 714 aaPredicted RBP7.39□□□□□ -1.23
CSMD1-211ENST00000523062 ADAMTS1Q9UHI8 967 aa7.39□□□□□ -1.23
CSMD1-211ENST00000523062 NAGPAQ9UK23 515 aa7.39□□□□□ -1.23
CSMD1-211ENST00000523062 INTUQ9ULD6 942 aa7.39□□□□□ -1.23
CSMD1-211ENST00000523062 JRKLQ9Y4A0 524 aa7.39□□□□□ -1.23
CSMD1-211ENST00000523062 CAPN6Q9Y6Q1 641 aa7.39□□□□□ -1.23
CSMD1-211ENST00000523062 NCANO14594 1321 aa7.38□□□□□ -1.23
CSMD1-211ENST00000523062 ELOA3CA0A087WX78 387 aaPredicted RBP7.38□□□□□ -1.23
CSMD1-211ENST00000523062 ELOA3DA6NLF2 546 aaPredicted RBP7.38□□□□□ -1.23
CSMD1-211ENST00000523062 C9orf172C9J069 976 aa7.38□□□□□ -1.23
CSMD1-211ENST00000523062 FOXN3O00409 490 aaPredicted RBP7.38□□□□□ -1.23
CSMD1-211ENST00000523062 DDX3XO00571 662 aaKnown RBP eCLIP7.38□□□□□ -1.23
CSMD1-211ENST00000523062 OGTO15294 1046 aa7.38□□□□□ -1.23
CSMD1-211ENST00000523062 CLDN3O15551 220 aa7.38□□□□□ -1.23
CSMD1-211ENST00000523062 MSCO60682 206 aa7.38□□□□□ -1.23
CSMD1-211ENST00000523062 LRRN2O75325 713 aa7.38□□□□□ -1.23
CSMD1-211ENST00000523062 ATP1A1P05023 1023 aaKnown RBP7.38□□□□□ -1.23
CSMD1-211ENST00000523062 MMP3P08254 477 aa7.38□□□□□ -1.23
CSMD1-211ENST00000523062 HOXC6P09630 235 aa7.38□□□□□ -1.23
CSMD1-211ENST00000523062 H2AFZP0C0S5 128 aa7.38□□□□□ -1.23
CSMD1-211ENST00000523062 ZNF286BP0CG31 522 aa7.38□□□□□ -1.23
CSMD1-211ENST00000523062 PNMA6AP0CW24 399 aaPredicted RBP7.38□□□□□ -1.23
CSMD1-211ENST00000523062 SRGAP2CP0DJJ0 459 aa7.38□□□□□ -1.23
CSMD1-211ENST00000523062 INSRRP14616 1297 aa7.38□□□□□ -1.23
CSMD1-211ENST00000523062 ELNP15502 786 aa7.38□□□□□ -1.23
CSMD1-211ENST00000523062 CD33P20138 364 aa7.38□□□□□ -1.23
CSMD1-211ENST00000523062 TNFAIP3P21580 790 aa7.38□□□□□ -1.23
CSMD1-211ENST00000523062 TMOD1P28289 359 aa7.38□□□□□ -1.23
CSMD1-211ENST00000523062 PIK3CAP42336 1068 aa7.38□□□□□ -1.23
CSMD1-211ENST00000523062 CLCN3P51790 818 aa7.38□□□□□ -1.23
CSMD1-211ENST00000523062 AP3M2P53677 418 aa7.38□□□□□ -1.23
CSMD1-211ENST00000523062 NAP1L1P55209 391 aaKnown RBP7.38□□□□□ -1.23
CSMD1-211ENST00000523062 PCBP4P57723 403 aaKnown RBP7.38□□□□□ -1.23
CSMD1-211ENST00000523062 CHMP4BP1P59074 171 aa7.38□□□□□ -1.23
CSMD1-211ENST00000523062 CLDN10P78369 228 aa7.38□□□□□ -1.23
CSMD1-211ENST00000523062 GCNT1Q02742 428 aa7.38□□□□□ -1.23
CSMD1-211ENST00000523062 POU5F1BQ06416 359 aa7.38□□□□□ -1.23
CSMD1-211ENST00000523062 MCL1Q07820 350 aa7.38□□□□□ -1.23
CSMD1-211ENST00000523062 GRM1Q13255 1194 aa7.38□□□□□ -1.23
CSMD1-211ENST00000523062 SURF1Q15526 300 aa7.38□□□□□ -1.23
CSMD1-211ENST00000523062 DGKDQ16760 1214 aa7.38□□□□□ -1.23
CSMD1-211ENST00000523062 KIAA0753Q2KHM9 967 aa7.38□□□□□ -1.23
CSMD1-211ENST00000523062 ELOA3BQ3SY89 546 aa7.38□□□□□ -1.23
CSMD1-211ENST00000523062 ZACNQ401N2 412 aa7.38□□□□□ -1.23
CSMD1-211ENST00000523062 TEX35Q5T0J7 233 aa7.38□□□□□ -1.23
CSMD1-211ENST00000523062 TMEM63BQ5T3F8 832 aa7.38□□□□□ -1.23
CSMD1-211ENST00000523062 ZNF468Q5VIY5 522 aaPredicted RBP7.38□□□□□ -1.23
CSMD1-211ENST00000523062 EFCAB12Q6NXP0 572 aa7.38□□□□□ -1.23
CSMD1-211ENST00000523062 ALKBH5Q6P6C2 394 aaKnown RBP7.38□□□□□ -1.23
CSMD1-211ENST00000523062 C15orf39Q6ZRI6 1047 aa7.38□□□□□ -1.23
CSMD1-211ENST00000523062 H2AFVQ71UI9 128 aa7.38□□□□□ -1.23
CSMD1-211ENST00000523062 ENOSF1Q7L5Y1 443 aa7.38□□□□□ -1.23
CSMD1-211ENST00000523062 SAPCD2Q86UD0 394 aa7.38□□□□□ -1.23
CSMD1-211ENST00000523062 RHPN2Q8IUC4 686 aa7.38□□□□□ -1.23
CSMD1-211ENST00000523062 FAM71AQ8IYT1 594 aa7.38□□□□□ -1.23
CSMD1-211ENST00000523062 PPM1KQ8N3J5 372 aa7.38□□□□□ -1.23
CSMD1-211ENST00000523062 METTL13Q8N6R0 699 aa7.38□□□□□ -1.23
CSMD1-211ENST00000523062 LINC01465Q8N7H1 131 aa7.38□□□□□ -1.23
CSMD1-211ENST00000523062 ELOA3Q8NG57 546 aa7.38□□□□□ -1.23
CSMD1-211ENST00000523062 C1orf216Q8TAB5 229 aa7.38□□□□□ -1.23
CSMD1-211ENST00000523062 TAS1R2Q8TE23 839 aa7.38□□□□□ -1.23
CSMD1-211ENST00000523062 U2AF1L4Q8WU68 220 aaKnown RBP7.38□□□□□ -1.23
CSMD1-211ENST00000523062 TRAPPC12Q8WVT3 735 aa7.38□□□□□ -1.23
CSMD1-211ENST00000523062 SOCS4Q8WXH5 440 aa7.38□□□□□ -1.23
CSMD1-211ENST00000523062 SHC3Q92529 594 aa7.38□□□□□ -1.23
CSMD1-211ENST00000523062 SEMA4DQ92854 862 aa7.38□□□□□ -1.23
CSMD1-211ENST00000523062 NLRP4Q96MN2 994 aa7.38□□□□□ -1.23
CSMD1-211ENST00000523062 MAP7D2Q96T17 732 aa7.38□□□□□ -1.23
CSMD1-211ENST00000523062 APBA2Q99767 749 aa7.38□□□□□ -1.23
CSMD1-211ENST00000523062 SYT11Q9BT88 431 aa7.38□□□□□ -1.23
CSMD1-211ENST00000523062 NFKBIZQ9BYH8 718 aa7.38□□□□□ -1.23
CSMD1-211ENST00000523062 ZFYVE28Q9HCC9 887 aa7.38□□□□□ -1.23
CSMD1-211ENST00000523062 C1orf112Q9NSG2 853 aa7.38□□□□□ -1.23
CSMD1-211ENST00000523062 RAB20Q9NX57 234 aa7.38□□□□□ -1.23
CSMD1-211ENST00000523062 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.38□□□□□ -1.23
CSMD1-211ENST00000523062 SAR1BQ9Y6B6 198 aa7.38□□□□□ -1.23
CSMD1-211ENST00000523062 DUSP10Q9Y6W6 482 aa7.38□□□□□ -1.23
CSMD1-211ENST00000523062 V9GYY5 206 aaPredicted RBP7.38□□□□□ -1.23
CSMD1-211ENST00000523062 PASKQ96RG2 1323 aa7.37□□□□□ -1.23
CSMD1-211ENST00000523062 A0A0A6YYK5 440 aaPredicted RBP7.37□□□□□ -1.23
CSMD1-211ENST00000523062 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.37□□□□□ -1.23
CSMD1-211ENST00000523062 CTAGE15A4D2H0 777 aa7.37□□□□□ -1.23
CSMD1-211ENST00000523062 INO80B-WBP1J3KQ70 363 aa7.37□□□□□ -1.23
CSMD1-211ENST00000523062 ACKR2O00590 384 aa7.37□□□□□ -1.23
CSMD1-211ENST00000523062 HLA-DRAP01903 254 aa7.37□□□□□ -1.23
CSMD1-211ENST00000523062 EDN1P05305 212 aa7.37□□□□□ -1.23
CSMD1-211ENST00000523062 CTAGE8P0CG41 777 aa7.37□□□□□ -1.23
CSMD1-211ENST00000523062 HARSP12081 509 aaKnown RBP7.37□□□□□ -1.23
CSMD1-211ENST00000523062 TCP1P17987 556 aaKnown RBP7.37□□□□□ -1.23
CSMD1-211ENST00000523062 TNNI1P19237 187 aa7.37□□□□□ -1.23
CSMD1-211ENST00000523062 KLRC1P26715 233 aa7.37□□□□□ -1.23
CSMD1-211ENST00000523062 RGS2P41220 211 aa7.37□□□□□ -1.23
CSMD1-211ENST00000523062 ACOT2P49753 483 aa7.37□□□□□ -1.23
CSMD1-211ENST00000523062 PTENP60484 403 aa7.37□□□□□ -1.23
CSMD1-211ENST00000523062 IGBP1P78318 339 aa7.37□□□□□ -1.23
CSMD1-211ENST00000523062 RBM10P98175 930 aaKnown RBP7.37□□□□□ -1.23
CSMD1-211ENST00000523062 TNFAIP2Q03169 654 aa7.37□□□□□ -1.23
CSMD1-211ENST00000523062 PPFIA1Q13136 1202 aa7.37□□□□□ -1.23
CSMD1-211ENST00000523062 BIRC3Q13489 604 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms