RNA–Protein interactions for RNA: ENST00000523004.1

GM2A-202, Transcript of GM2 ganglioside activator, humanhuman

TSL 1 (best)

Gene GM2A, Length 643 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GM2A-202ENST00000523004 DTHD1Q6ZMT9 781 aa8.6□□□□□ -1.03
GM2A-202ENST00000523004 PDZD4Q76G19 769 aaPredicted RBP8.6□□□□□ -1.03
GM2A-202ENST00000523004 HS6ST3Q8IZP7 471 aa8.6□□□□□ -1.03
GM2A-202ENST00000523004 ELMOD1Q8N336 334 aa8.6□□□□□ -1.03
GM2A-202ENST00000523004 KCTD17Q8N5Z5 321 aa8.6□□□□□ -1.03
GM2A-202ENST00000523004 GPR161Q8N6U8 529 aaKnown RBP8.6□□□□□ -1.03
GM2A-202ENST00000523004 FAM184AQ8NB25 1140 aa8.6□□□□□ -1.03
GM2A-202ENST00000523004 LEMD2Q8NC56 503 aa8.6□□□□□ -1.03
GM2A-202ENST00000523004 TMEM161BQ8NDZ6 487 aa8.6□□□□□ -1.03
GM2A-202ENST00000523004 APPL2Q8NEU8 664 aa8.6□□□□□ -1.03
GM2A-202ENST00000523004 BEST2Q8NFU1 509 aa8.6□□□□□ -1.03
GM2A-202ENST00000523004 DDX12PQ92771 950 aa8.6□□□□□ -1.03
GM2A-202ENST00000523004 SMARCD2Q92925 531 aa8.6□□□□□ -1.03
GM2A-202ENST00000523004 IRF7Q92985 503 aa8.6□□□□□ -1.03
GM2A-202ENST00000523004 ZNF512Q96ME7 567 aaPredicted RBP8.6□□□□□ -1.03
GM2A-202ENST00000523004 ZSWIM3Q96MP5 696 aa8.6□□□□□ -1.03
GM2A-202ENST00000523004 TRMT61BQ9BVS5 477 aaKnown RBP8.6□□□□□ -1.03
GM2A-202ENST00000523004 FAM126AQ9BYI3 521 aaPredicted RBP8.6□□□□□ -1.03
GM2A-202ENST00000523004 CHRDQ9H2X0 955 aa8.6□□□□□ -1.03
GM2A-202ENST00000523004 BRD9Q9H8M2 597 aa8.6□□□□□ -1.03
GM2A-202ENST00000523004 PLEKHA5Q9HAU0 1116 aa8.6□□□□□ -1.03
GM2A-202ENST00000523004 TRPV4Q9HBA0 871 aa8.6□□□□□ -1.03
GM2A-202ENST00000523004 ZNF334Q9HCZ1 680 aaPredicted RBP8.6□□□□□ -1.03
GM2A-202ENST00000523004 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.6□□□□□ -1.03
GM2A-202ENST00000523004 KCNG1Q9UIX4 513 aa8.6□□□□□ -1.03
GM2A-202ENST00000523004 PCDHB8Q9UN66 801 aa8.6□□□□□ -1.03
GM2A-202ENST00000523004 SDK1Q7Z5N4 2213 aa8.6□□□□□ -1.03
GM2A-202ENST00000523004 RALGAPA1Q6GYQ0 2036 aa8.59□□□□□ -1.03
GM2A-202ENST00000523004 ACACBO00763 2458 aa8.59□□□□□ -1.03
GM2A-202ENST00000523004 TTC26A0AVF1 554 aa8.59□□□□□ -1.03
GM2A-202ENST00000523004 M0QZQ0 153 aa8.59□□□□□ -1.03
GM2A-202ENST00000523004 CLDN3O15551 220 aa8.59□□□□□ -1.03
GM2A-202ENST00000523004 OAZ2O95190 189 aa8.59□□□□□ -1.03
GM2A-202ENST00000523004 CD2BP2O95400 341 aaKnown RBP8.59□□□□□ -1.03
GM2A-202ENST00000523004 CLTAP09496 248 aa8.59□□□□□ -1.03
GM2A-202ENST00000523004 MAPTP10636 758 aaKnown RBP8.59□□□□□ -1.03
GM2A-202ENST00000523004 HARSP12081 509 aaKnown RBP8.59□□□□□ -1.03
GM2A-202ENST00000523004 TDGF1P13385 188 aa8.59□□□□□ -1.03
GM2A-202ENST00000523004 PLS3P13797 630 aa8.59□□□□□ -1.03
GM2A-202ENST00000523004 LRPAP1P30533 357 aa8.59□□□□□ -1.03
GM2A-202ENST00000523004 AARSP49588 968 aaKnown RBP eCLIP8.59□□□□□ -1.03
GM2A-202ENST00000523004 SMTNP53814 917 aa8.59□□□□□ -1.03
GM2A-202ENST00000523004 TWF1Q12792 350 aa8.59□□□□□ -1.03
GM2A-202ENST00000523004 STRN3Q13033 797 aa8.59□□□□□ -1.03
GM2A-202ENST00000523004 CUL4AQ13619 759 aa8.59□□□□□ -1.03
GM2A-202ENST00000523004 ZBTB6Q15916 424 aa8.59□□□□□ -1.03
GM2A-202ENST00000523004 RSPO4Q2I0M5 234 aaPredicted RBP8.59□□□□□ -1.03
GM2A-202ENST00000523004 SEZ6Q53EL9 994 aa8.59□□□□□ -1.03
GM2A-202ENST00000523004 TSSK4Q6SA08 328 aa8.59□□□□□ -1.03
GM2A-202ENST00000523004 RNF19BQ6ZMZ0 732 aa8.59□□□□□ -1.03
GM2A-202ENST00000523004 CLEC17AQ6ZS10 378 aa8.59□□□□□ -1.03
GM2A-202ENST00000523004 MFSD6LQ8IWD5 586 aa8.59□□□□□ -1.03
GM2A-202ENST00000523004 SYT2Q8N9I0 419 aaPredicted RBP8.59□□□□□ -1.03
GM2A-202ENST00000523004 DEPDC1BQ8WUY9 529 aa8.59□□□□□ -1.03
GM2A-202ENST00000523004 KCNN1Q92952 543 aa8.59□□□□□ -1.03
GM2A-202ENST00000523004 TMX3Q96JJ7 454 aa8.59□□□□□ -1.03
GM2A-202ENST00000523004 IER2Q9BTL4 223 aa8.59□□□□□ -1.03
GM2A-202ENST00000523004 LRRC3Q9BY71 257 aa8.59□□□□□ -1.03
GM2A-202ENST00000523004 OXCT2Q9BYC2 517 aaPredicted RBP8.59□□□□□ -1.03
GM2A-202ENST00000523004 HAPLN2Q9GZV7 340 aa8.59□□□□□ -1.03
GM2A-202ENST00000523004 ASAH2Q9NR71 780 aa8.59□□□□□ -1.03
GM2A-202ENST00000523004 ANKFY1Q9P2R3 1169 aa8.59□□□□□ -1.03
GM2A-202ENST00000523004 NCDNQ9UBB6 729 aa8.59□□□□□ -1.03
GM2A-202ENST00000523004 TUBGCP4Q9UGJ1 667 aa8.59□□□□□ -1.03
GM2A-202ENST00000523004 NDRG2Q9UN36 371 aaKnown RBP8.59□□□□□ -1.03
GM2A-202ENST00000523004 SMG5Q9UPR3 1016 aaKnown RBP8.59□□□□□ -1.03
GM2A-202ENST00000523004 SSUH2Q9Y2M2 353 aa8.59□□□□□ -1.03
GM2A-202ENST00000523004 ATP6V1DQ9Y5K8 247 aa8.59□□□□□ -1.03
GM2A-202ENST00000523004 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.59□□□□□ -1.03
GM2A-202ENST00000523004 CNOT1A5YKK6 2376 aaKnown RBP8.58□□□□□ -1.04
GM2A-202ENST00000523004 NCANO14594 1321 aa8.58□□□□□ -1.04
GM2A-202ENST00000523004 ANK1P16157 1881 aa8.58□□□□□ -1.04
GM2A-202ENST00000523004 EPG5Q9HCE0 2579 aa8.58□□□□□ -1.04
GM2A-202ENST00000523004 ARNTLO00327 626 aa8.58□□□□□ -1.04
GM2A-202ENST00000523004 ZNF263O14978 683 aa8.58□□□□□ -1.04
GM2A-202ENST00000523004 VNN2O95498 520 aa8.58□□□□□ -1.04
GM2A-202ENST00000523004 CXCL8P10145 99 aa8.58□□□□□ -1.04
GM2A-202ENST00000523004 MYL4P12829 197 aa8.58□□□□□ -1.04
GM2A-202ENST00000523004 CPB1P15086 417 aa8.58□□□□□ -1.04
GM2A-202ENST00000523004 GJA1P17302 382 aa8.58□□□□□ -1.04
GM2A-202ENST00000523004 CYP3A5P20815 502 aa8.58□□□□□ -1.04
GM2A-202ENST00000523004 SDHBP21912 280 aa8.58□□□□□ -1.04
GM2A-202ENST00000523004 TGM1P22735 817 aa8.58□□□□□ -1.04
GM2A-202ENST00000523004 MARCKSP29966 332 aaPredicted RBP8.58□□□□□ -1.04
GM2A-202ENST00000523004 GDI1P31150 447 aa8.58□□□□□ -1.04
GM2A-202ENST00000523004 VIPR2P41587 438 aa8.58□□□□□ -1.04
GM2A-202ENST00000523004 NRLP54845 237 aa8.58□□□□□ -1.04
GM2A-202ENST00000523004 SLC12A3P55017 1021 aa8.58□□□□□ -1.04
GM2A-202ENST00000523004 MLLT6P55198 1093 aaPredicted RBP8.58□□□□□ -1.04
GM2A-202ENST00000523004 ATP2C1P98194 919 aaPredicted RBP8.58□□□□□ -1.04
GM2A-202ENST00000523004 YWHAHQ04917 246 aaPredicted RBP8.58□□□□□ -1.04
GM2A-202ENST00000523004 RAD51AP2Q09MP3 1159 aa8.58□□□□□ -1.04
GM2A-202ENST00000523004 GSE1Q14687 1217 aa8.58□□□□□ -1.04
GM2A-202ENST00000523004 TMC8Q8IU68 726 aa8.58□□□□□ -1.04
GM2A-202ENST00000523004 TMEM130Q8N3G9 435 aa8.58□□□□□ -1.04
GM2A-202ENST00000523004 SHKBP1Q8TBC3 707 aa8.58□□□□□ -1.04
GM2A-202ENST00000523004 ZSCAN18Q8TBC5 510 aaPredicted RBP8.58□□□□□ -1.04
GM2A-202ENST00000523004 FAM3CQ92520 227 aa8.58□□□□□ -1.04
GM2A-202ENST00000523004 SECISBP2LQ93073 1101 aaKnown RBP8.58□□□□□ -1.04
GM2A-202ENST00000523004 E2F7Q96AV8 911 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms