RNA–Protein interactions for RNA: ENST00000522796.1

HMGB4-204, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGB4, Length 2,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-204ENST00000522796 BORCS5Q969J3 196 aa8.72□□□□□ -1.01
HMGB4-204ENST00000522796 SLC47A1Q96FL8 570 aa8.72□□□□□ -1.01
HMGB4-204ENST00000522796 ZFRQ96KR1 1074 aaKnown RBP8.72□□□□□ -1.01
HMGB4-204ENST00000522796 CCDC138Q96M89 665 aa8.72□□□□□ -1.01
HMGB4-204ENST00000522796 INPP4AQ96PE3 977 aaPredicted RBP8.72□□□□□ -1.01
HMGB4-204ENST00000522796 ECSITQ9BQ95 431 aa8.72□□□□□ -1.01
HMGB4-204ENST00000522796 ZBED2Q9BTP6 218 aa8.72□□□□□ -1.01
HMGB4-204ENST00000522796 TBC1D10AQ9BXI6 508 aa8.72□□□□□ -1.01
HMGB4-204ENST00000522796 RNF41Q9H4P4 317 aaPredicted RBP8.72□□□□□ -1.01
HMGB4-204ENST00000522796 SLC39A1Q9NY26 324 aa8.72□□□□□ -1.01
HMGB4-204ENST00000522796 SOX13Q9UN79 622 aa8.72□□□□□ -1.01
HMGB4-204ENST00000522796 APOBEC2Q9Y235 224 aaKnown RBP8.72□□□□□ -1.01
HMGB4-204ENST00000522796 CARMIL2Q6F5E8 1435 aa8.72□□□□□ -1.01
HMGB4-204ENST00000522796 KDM5AP29375 1690 aaKnown RBP8.72□□□□□ -1.01
HMGB4-204ENST00000522796 MAP3K19Q56UN5 1328 aa8.72□□□□□ -1.01
HMGB4-204ENST00000522796 KIAA0556O60303 1618 aa8.72□□□□□ -1.01
HMGB4-204ENST00000522796 GOLGA8QA0A0J9YX86 632 aa8.72□□□□□ -1.01
HMGB4-204ENST00000522796 GOLGA8OA6NCC3 632 aa8.72□□□□□ -1.01
HMGB4-204ENST00000522796 DCDC2CA8MYV0 355 aa8.72□□□□□ -1.01
HMGB4-204ENST00000522796 GOLGA8NF8WBI6 632 aa8.72□□□□□ -1.01
HMGB4-204ENST00000522796 PI4K2BG5E9Z4 385 aa8.72□□□□□ -1.01
HMGB4-204ENST00000522796 GOLGA8RI6L899 631 aa8.72□□□□□ -1.01
HMGB4-204ENST00000522796 K7EPI3 171 aa8.72□□□□□ -1.01
HMGB4-204ENST00000522796 TOR1BO14657 336 aa8.72□□□□□ -1.01
HMGB4-204ENST00000522796 TLR3O15455 904 aaKnown RBP8.72□□□□□ -1.01
HMGB4-204ENST00000522796 COBLO75128 1261 aa8.72□□□□□ -1.01
HMGB4-204ENST00000522796 TBX10O75333 385 aa8.72□□□□□ -1.01
HMGB4-204ENST00000522796 ALX3O95076 343 aa8.72□□□□□ -1.01
HMGB4-204ENST00000522796 EYA4O95677 639 aa8.72□□□□□ -1.01
HMGB4-204ENST00000522796 ESRRBO95718 433 aa8.72□□□□□ -1.01
HMGB4-204ENST00000522796 DDX58O95786 925 aaKnown RBP8.72□□□□□ -1.01
HMGB4-204ENST00000522796 GYPCP04921 128 aa8.72□□□□□ -1.01
HMGB4-204ENST00000522796 C6orf222P0C671 652 aaPredicted RBP8.72□□□□□ -1.01
HMGB4-204ENST00000522796 PCSK6P29122 969 aa8.72□□□□□ -1.01
HMGB4-204ENST00000522796 SLC5A2P31639 672 aa8.72□□□□□ -1.01
HMGB4-204ENST00000522796 CAP2P40123 477 aa8.72□□□□□ -1.01
HMGB4-204ENST00000522796 PAFAH1B1P43034 410 aa8.72□□□□□ -1.01
HMGB4-204ENST00000522796 ASMTP46597 345 aa8.72□□□□□ -1.01
HMGB4-204ENST00000522796 RPL26P61254 145 aaKnown RBP8.72□□□□□ -1.01
HMGB4-204ENST00000522796 TRIM14Q14142 442 aa8.72□□□□□ -1.01
HMGB4-204ENST00000522796 NPTX1Q15818 432 aa8.72□□□□□ -1.01
HMGB4-204ENST00000522796 UAP1Q16222 522 aaPredicted RBP8.72□□□□□ -1.01
HMGB4-204ENST00000522796 PPP6R3Q5H9R7 873 aaPredicted RBP8.72□□□□□ -1.01
HMGB4-204ENST00000522796 SLFN13Q68D06 897 aa8.72□□□□□ -1.01
HMGB4-204ENST00000522796 RWDD4Q6NW29 188 aaKnown RBP8.72□□□□□ -1.01
HMGB4-204ENST00000522796 DCLRE1AQ6PJP8 1040 aa8.72□□□□□ -1.01
HMGB4-204ENST00000522796 ANGPTL8Q6UXH0 198 aa8.72□□□□□ -1.01
HMGB4-204ENST00000522796 HID1Q8IV36 788 aa8.72□□□□□ -1.01
HMGB4-204ENST00000522796 DTX3Q8N9I9 347 aa8.72□□□□□ -1.01
HMGB4-204ENST00000522796 PPHLN1Q8NEY8 458 aaKnown RBP8.72□□□□□ -1.01
HMGB4-204ENST00000522796 PI4K2BQ8TCG2 481 aa8.72□□□□□ -1.01
HMGB4-204ENST00000522796 CPLX3Q8WVH0 158 aa8.72□□□□□ -1.01
HMGB4-204ENST00000522796 FAR2Q96K12 515 aa8.72□□□□□ -1.01
HMGB4-204ENST00000522796 NOX5Q96PH1 765 aa8.72□□□□□ -1.01
HMGB4-204ENST00000522796 PURBQ96QR8 312 aaKnown RBP8.72□□□□□ -1.01
HMGB4-204ENST00000522796 NTPCRQ9BSD7 190 aaKnown RBP8.72□□□□□ -1.01
HMGB4-204ENST00000522796 WNT5BQ9H1J7 359 aa8.72□□□□□ -1.01
HMGB4-204ENST00000522796 VPS11Q9H270 941 aa8.72□□□□□ -1.01
HMGB4-204ENST00000522796 ARMC7Q9H6L4 198 aa8.72□□□□□ -1.01
HMGB4-204ENST00000522796 C10orf88Q9H8K7 445 aa8.72□□□□□ -1.01
HMGB4-204ENST00000522796 ARNT2Q9HBZ2 717 aa8.72□□□□□ -1.01
HMGB4-204ENST00000522796 INTS9Q9NV88 658 aaKnown RBP8.72□□□□□ -1.01
HMGB4-204ENST00000522796 SLC38A7Q9NVC3 462 aa8.72□□□□□ -1.01
HMGB4-204ENST00000522796 PLK2Q9NYY3 685 aa8.72□□□□□ -1.01
HMGB4-204ENST00000522796 FNIP2Q9P278 1114 aa8.72□□□□□ -1.01
HMGB4-204ENST00000522796 DACH1Q9UI36 760 aa8.72□□□□□ -1.01
HMGB4-204ENST00000522796 PCDHA12Q9UN75 941 aa8.72□□□□□ -1.01
HMGB4-204ENST00000522796 GPSM3Q9Y4H4 160 aa8.72□□□□□ -1.01
HMGB4-204ENST00000522796 ERCC6L2Q5T890 1561 aa8.71□□□□□ -1.01
HMGB4-204ENST00000522796 IQGAP1P46940 1657 aa8.71□□□□□ -1.01
HMGB4-204ENST00000522796 NEO1Q92859 1461 aa8.71□□□□□ -1.01
HMGB4-204ENST00000522796 CCDC160A6NGH7 325 aa8.71□□□□□ -1.02
HMGB4-204ENST00000522796 TK2O00142 265 aa8.71□□□□□ -1.02
HMGB4-204ENST00000522796 SLC22A1O15245 554 aa8.71□□□□□ -1.02
HMGB4-204ENST00000522796 RHOBTB3O94955 611 aa8.71□□□□□ -1.02
HMGB4-204ENST00000522796 RASGRP1O95267 797 aa8.71□□□□□ -1.02
HMGB4-204ENST00000522796 PSMG1O95456 288 aa8.71□□□□□ -1.02
HMGB4-204ENST00000522796 AGR2O95994 175 aa8.71□□□□□ -1.02
HMGB4-204ENST00000522796 POU2F1P14859 743 aa8.71□□□□□ -1.02
HMGB4-204ENST00000522796 STX2P32856 288 aa8.71□□□□□ -1.02
HMGB4-204ENST00000522796 EIF3BP55884 814 aaKnown RBP8.71□□□□□ -1.02
HMGB4-204ENST00000522796 GNG2P59768 71 aa8.71□□□□□ -1.02
HMGB4-204ENST00000522796 RPP38P78345 283 aaKnown RBP8.71□□□□□ -1.02
HMGB4-204ENST00000522796 C19orf57Q0VDD7 668 aa8.71□□□□□ -1.02
HMGB4-204ENST00000522796 STK4Q13043 487 aa8.71□□□□□ -1.02
HMGB4-204ENST00000522796 CCNG2Q16589 344 aa8.71□□□□□ -1.02
HMGB4-204ENST00000522796 ADCK5Q3MIX3 580 aa8.71□□□□□ -1.02
HMGB4-204ENST00000522796 GPR141Q7Z602 305 aa8.71□□□□□ -1.02
HMGB4-204ENST00000522796 COLGALT2Q8IYK4 626 aa8.71□□□□□ -1.02
HMGB4-204ENST00000522796 OR2W6PQ8NHA6 318 aa8.71□□□□□ -1.02
HMGB4-204ENST00000522796 PMEPA1Q969W9 287 aa8.71□□□□□ -1.02
HMGB4-204ENST00000522796 PIP5K1AQ99755 562 aa8.71□□□□□ -1.02
HMGB4-204ENST00000522796 TRIM55Q9BYV6 548 aa8.71□□□□□ -1.02
HMGB4-204ENST00000522796 GRIP2Q9C0E4 1043 aa8.71□□□□□ -1.02
HMGB4-204ENST00000522796 RAD21L1Q9H4I0 556 aa8.71□□□□□ -1.02
HMGB4-204ENST00000522796 MOV10Q9HCE1 1003 aaKnown RBP8.71□□□□□ -1.02
HMGB4-204ENST00000522796 EMILIN3Q9NT22 766 aa8.71□□□□□ -1.02
HMGB4-204ENST00000522796 ZDHHC7Q9NXF8 308 aa8.71□□□□□ -1.02
HMGB4-204ENST00000522796 NCKIPSDQ9NZQ3 722 aa8.71□□□□□ -1.02
HMGB4-204ENST00000522796 ANGPTL2Q9UKU9 493 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms