RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 TRMT10CQ7L0Y3 403 aaKnown RBP17.06■□□□□ 0.32
PCDHA3-201ENST00000522353 CPA4Q9UI42 421 aa17.06■□□□□ 0.32
PCDHA3-201ENST00000522353 PRPF4O43172 522 aaKnown RBP eCLIP17.06■□□□□ 0.32
PCDHA3-201ENST00000522353 TRPA1O75762 1119 aa17.06■□□□□ 0.32
PCDHA3-201ENST00000522353 SETSIPP0DME0 302 aa17.06■□□□□ 0.32
PCDHA3-201ENST00000522353 VCAM1P19320 739 aa17.06■□□□□ 0.32
PCDHA3-201ENST00000522353 TWF1Q12792 350 aa17.06■□□□□ 0.32
PCDHA3-201ENST00000522353 GMCL1P1Q8NEA9 526 aa17.06■□□□□ 0.32
PCDHA3-201ENST00000522353 MTBPQ96DY7 904 aa17.06■□□□□ 0.32
PCDHA3-201ENST00000522353 AGAP3Q96P47 875 aa17.06■□□□□ 0.32
PCDHA3-201ENST00000522353 YME1L1Q96TA2 773 aa17.06■□□□□ 0.32
PCDHA3-201ENST00000522353 CYTH2Q99418 400 aa17.06■□□□□ 0.32
PCDHA3-201ENST00000522353 URODP06132 367 aa17.05■□□□□ 0.32
PCDHA3-201ENST00000522353 BRAFP15056 766 aa17.05■□□□□ 0.32
PCDHA3-201ENST00000522353 SLC11A2P49281 568 aa17.05■□□□□ 0.32
PCDHA3-201ENST00000522353 GALCP54803 685 aa17.05■□□□□ 0.32
PCDHA3-201ENST00000522353 ATP6V0D2Q8N8Y2 350 aa17.05■□□□□ 0.32
PCDHA3-201ENST00000522353 RSAD1Q9HA92 442 aa17.05■□□□□ 0.32
PCDHA3-201ENST00000522353 EML4Q9HC35 981 aaKnown RBP17.05■□□□□ 0.32
PCDHA3-201ENST00000522353 SENP1Q9P0U3 644 aa17.05■□□□□ 0.32
PCDHA3-201ENST00000522353 TPX2Q9ULW0 747 aaKnown RBP17.05■□□□□ 0.32
PCDHA3-201ENST00000522353 FAM95CA0A1B0GW59 222 aa17.05■□□□□ 0.32
PCDHA3-201ENST00000522353 GYG2O15488 501 aa17.05■□□□□ 0.32
PCDHA3-201ENST00000522353 STRNO43815 780 aa17.05■□□□□ 0.32
PCDHA3-201ENST00000522353 WEE2P0C1S8 567 aa17.05■□□□□ 0.32
PCDHA3-201ENST00000522353 NAMPTP43490 491 aa17.05■□□□□ 0.32
PCDHA3-201ENST00000522353 PDCLQ13371 301 aa17.05■□□□□ 0.32
PCDHA3-201ENST00000522353 TEDDM1Q5T9Z0 273 aa17.05■□□□□ 0.32
PCDHA3-201ENST00000522353 KDELC2Q7Z4H8 507 aa17.05■□□□□ 0.32
PCDHA3-201ENST00000522353 LATS2Q9NRM7 1088 aa17.05■□□□□ 0.32
PCDHA3-201ENST00000522353 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.05■□□□□ 0.32
PCDHA3-201ENST00000522353 SPAG7O75391 227 aa17.05■□□□□ 0.32
PCDHA3-201ENST00000522353 MTFR1Q15390 333 aa17.05■□□□□ 0.32
PCDHA3-201ENST00000522353 GOLGA7BQ2TAP0 167 aa17.05■□□□□ 0.32
PCDHA3-201ENST00000522353 NBPF9Q3BBW0 867 aa17.05■□□□□ 0.32
PCDHA3-201ENST00000522353 GPAT2Q6NUI2 795 aa17.05■□□□□ 0.32
PCDHA3-201ENST00000522353 ARHGEF26Q96DR7 871 aa17.05■□□□□ 0.32
PCDHA3-201ENST00000522353 RMDN2Q96LZ7 410 aa17.05■□□□□ 0.32
PCDHA3-201ENST00000522353 UNC45AQ9H3U1 944 aa17.05■□□□□ 0.32
PCDHA3-201ENST00000522353 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.05■□□□□ 0.32
PCDHA3-201ENST00000522353 E9PCH4 1651 aa17.05■□□□□ 0.32
PCDHA3-201ENST00000522353 C2CD2LO14523 706 aa17.05■□□□□ 0.32
PCDHA3-201ENST00000522353 TLR2O60603 784 aa17.05■□□□□ 0.32
PCDHA3-201ENST00000522353 DDNO94850 711 aaPredicted RBP17.05■□□□□ 0.32
PCDHA3-201ENST00000522353 APRTP07741 180 aa17.05■□□□□ 0.32
PCDHA3-201ENST00000522353 NCAM1P13591 858 aa17.05■□□□□ 0.32
PCDHA3-201ENST00000522353 GPD1P21695 349 aa17.05■□□□□ 0.32
PCDHA3-201ENST00000522353 PDAP1Q13442 181 aaKnown RBP17.05■□□□□ 0.32
PCDHA3-201ENST00000522353 GRAMD1BQ3KR37 738 aa17.05■□□□□ 0.32
PCDHA3-201ENST00000522353 CALML6Q8TD86 181 aa17.05■□□□□ 0.32
PCDHA3-201ENST00000522353 DPF3Q92784 378 aa17.05■□□□□ 0.32
PCDHA3-201ENST00000522353 DPP3Q9NY33 737 aa17.05■□□□□ 0.32
PCDHA3-201ENST00000522353 ITGB3P05106 788 aa17.05■□□□□ 0.32
PCDHA3-201ENST00000522353 PGK2P07205 417 aa17.05■□□□□ 0.32
PCDHA3-201ENST00000522353 RBBP7Q16576 425 aa17.05■□□□□ 0.32
PCDHA3-201ENST00000522353 FAM47EQ6ZV65 393 aa17.05■□□□□ 0.32
PCDHA3-201ENST00000522353 TXNRD3Q86VQ6 643 aa17.05■□□□□ 0.32
PCDHA3-201ENST00000522353 LRRC37BQ96QE4 947 aa17.05■□□□□ 0.32
PCDHA3-201ENST00000522353 TSR3Q9UJK0 312 aaKnown RBP17.05■□□□□ 0.32
PCDHA3-201ENST00000522353 MAGOHP61326 146 aaKnown RBP17.04■□□□□ 0.32
PCDHA3-201ENST00000522353 ELAVL2Q12926 359 aaKnown RBP17.04■□□□□ 0.32
PCDHA3-201ENST00000522353 STAT4Q14765 748 aa17.04■□□□□ 0.32
PCDHA3-201ENST00000522353 EFTUD2Q15029 972 aaKnown RBP eCLIP17.04■□□□□ 0.32
PCDHA3-201ENST00000522353 TRADDQ15628 312 aa17.04■□□□□ 0.32
PCDHA3-201ENST00000522353 LCA5Q86VQ0 697 aa17.04■□□□□ 0.32
PCDHA3-201ENST00000522353 CPS1P31327 1500 aa17.04■□□□□ 0.32
PCDHA3-201ENST00000522353 RPL10AP62906 217 aaKnown RBP17.04■□□□□ 0.32
PCDHA3-201ENST00000522353 PPP2R2AP63151 447 aa17.04■□□□□ 0.32
PCDHA3-201ENST00000522353 CDH18Q13634 790 aa17.04■□□□□ 0.32
PCDHA3-201ENST00000522353 DNERQ8NFT8 737 aa17.04■□□□□ 0.32
PCDHA3-201ENST00000522353 OTUB1Q96FW1 271 aaPredicted RBP17.04■□□□□ 0.32
PCDHA3-201ENST00000522353 SLC13A1Q9BZW2 595 aa17.04■□□□□ 0.32
PCDHA3-201ENST00000522353 KIAA1257Q9ULG3 409 aa17.04■□□□□ 0.32
PCDHA3-201ENST00000522353 DIAPH2O60879 1101 aa17.04■□□□□ 0.32
PCDHA3-201ENST00000522353 RPSAP08865 295 aaKnown RBP17.04■□□□□ 0.32
PCDHA3-201ENST00000522353 RGS4P49798 205 aa17.04■□□□□ 0.32
PCDHA3-201ENST00000522353 ELOA2Q8IYF1 753 aaPredicted RBP17.04■□□□□ 0.32
PCDHA3-201ENST00000522353 CXorf38Q8TB03 319 aa17.04■□□□□ 0.32
PCDHA3-201ENST00000522353 USP33Q8TEY7 942 aa17.04■□□□□ 0.32
PCDHA3-201ENST00000522353 CLCA2Q9UQC9 943 aa17.04■□□□□ 0.32
PCDHA3-201ENST00000522353 HOXC6P09630 235 aa17.04■□□□□ 0.32
PCDHA3-201ENST00000522353 ADCK2Q7Z695 626 aa17.04■□□□□ 0.32
PCDHA3-201ENST00000522353 FBXO16Q8IX29 292 aaPredicted RBP17.04■□□□□ 0.32
PCDHA3-201ENST00000522353 DDIASQ8IXT1 998 aa17.04■□□□□ 0.32
PCDHA3-201ENST00000522353 SLC35G2Q8TBE7 412 aa17.04■□□□□ 0.32
PCDHA3-201ENST00000522353 RUBCNQ92622 972 aa17.04■□□□□ 0.32
PCDHA3-201ENST00000522353 USP13Q92995 863 aaPredicted RBP17.04■□□□□ 0.32
PCDHA3-201ENST00000522353 KIF2CQ99661 725 aa17.04■□□□□ 0.32
PCDHA3-201ENST00000522353 SPATC1LQ9H0A9 340 aa17.04■□□□□ 0.32
PCDHA3-201ENST00000522353 RAB6BQ9NRW1 208 aa17.04■□□□□ 0.32
PCDHA3-201ENST00000522353 A0A1B0GTH6 734 aa17.03■□□□□ 0.32
PCDHA3-201ENST00000522353 HMOX2P30519 316 aa17.03■□□□□ 0.32
PCDHA3-201ENST00000522353 MAPRE2Q15555 327 aa17.03■□□□□ 0.32
PCDHA3-201ENST00000522353 MAP1SQ66K74 1059 aaPredicted RBP17.03■□□□□ 0.32
PCDHA3-201ENST00000522353 GPC2Q8N158 579 aa17.03■□□□□ 0.32
PCDHA3-201ENST00000522353 RTFDC1Q9BY42 306 aaPredicted RBP17.03■□□□□ 0.32
PCDHA3-201ENST00000522353 XAB2Q9HCS7 855 aaKnown RBP17.03■□□□□ 0.32
PCDHA3-201ENST00000522353 ARHGAP10A1A4S6 786 aa17.03■□□□□ 0.32
PCDHA3-201ENST00000522353 SMAPO00193 183 aa17.03■□□□□ 0.32
PCDHA3-201ENST00000522353 SYF2O95926 243 aaKnown RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms