RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 SOCS4Q8WXH5 440 aa17.03■□□□□ 0.32
USP42-207ENST00000521713 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.03■□□□□ 0.32
USP42-207ENST00000521713 VWA5AO00534 786 aa17.02■□□□□ 0.32
USP42-207ENST00000521713 ACSL3O95573 720 aa17.02■□□□□ 0.32
USP42-207ENST00000521713 PDGFRBP09619 1106 aa17.02■□□□□ 0.32
USP42-207ENST00000521713 ZNF677Q86XU0 584 aa17.02■□□□□ 0.32
USP42-207ENST00000521713 C4orf19Q8IY42 314 aa17.02■□□□□ 0.32
USP42-207ENST00000521713 C3orf20Q8ND61 904 aa17.02■□□□□ 0.32
USP42-207ENST00000521713 CDCA5Q96FF9 252 aa17.02■□□□□ 0.32
USP42-207ENST00000521713 IRAK4Q9NWZ3 460 aa17.02■□□□□ 0.32
USP42-207ENST00000521713 SENP1Q9P0U3 644 aa17.02■□□□□ 0.32
USP42-207ENST00000521713 PPARGC1AQ9UBK2 798 aaKnown RBP17.02■□□□□ 0.32
USP42-207ENST00000521713 ARL2BPQ9Y2Y0 163 aa17.02■□□□□ 0.32
USP42-207ENST00000521713 SALL3Q9BXA9 1300 aa17.02■□□□□ 0.32
USP42-207ENST00000521713 TRIM66O15016 1216 aa17.02■□□□□ 0.32
USP42-207ENST00000521713 TPI1P60174 286 aa17.02■□□□□ 0.32
USP42-207ENST00000521713 FMR1Q06787 632 aaKnown RBP eCLIP17.02■□□□□ 0.32
USP42-207ENST00000521713 EFHBQ8N7U6 833 aa17.02■□□□□ 0.32
USP42-207ENST00000521713 HPDLQ96IR7 371 aa17.02■□□□□ 0.32
USP42-207ENST00000521713 INTUQ9ULD6 942 aa17.02■□□□□ 0.32
USP42-207ENST00000521713 APOBEC2Q9Y235 224 aaKnown RBP17.02■□□□□ 0.32
USP42-207ENST00000521713 HNRNPCP07910 306 aaKnown RBP eCLIP17.02■□□□□ 0.31
USP42-207ENST00000521713 TMEM169Q96HH4 297 aa17.02■□□□□ 0.31
USP42-207ENST00000521713 ZNF512Q96ME7 567 aaPredicted RBP17.02■□□□□ 0.31
USP42-207ENST00000521713 DYRK4Q9NR20 520 aa17.02■□□□□ 0.31
USP42-207ENST00000521713 AGPAT3Q9NRZ7 376 aa17.02■□□□□ 0.31
USP42-207ENST00000521713 DISP2A7MBM2 1401 aa17.02■□□□□ 0.31
USP42-207ENST00000521713 A0A0G2JND7 137 aa17.02■□□□□ 0.31
USP42-207ENST00000521713 ADM5C9JUS6 153 aa17.02■□□□□ 0.31
USP42-207ENST00000521713 TRIM59Q8IWR1 403 aa17.02■□□□□ 0.31
USP42-207ENST00000521713 FBXL16Q8N461 479 aa17.02■□□□□ 0.31
USP42-207ENST00000521713 ANKS1AQ92625 1134 aa17.02■□□□□ 0.31
USP42-207ENST00000521713 GAKO14976 1311 aa17.01■□□□□ 0.31
USP42-207ENST00000521713 APOL1O14791 398 aa17.01■□□□□ 0.31
USP42-207ENST00000521713 SERPINB4P48594 390 aa17.01■□□□□ 0.31
USP42-207ENST00000521713 ALDH7A1P49419 539 aaKnown RBP17.01■□□□□ 0.31
USP42-207ENST00000521713 AP1B1Q10567 949 aa17.01■□□□□ 0.31
USP42-207ENST00000521713 GRB10Q13322 594 aa17.01■□□□□ 0.31
USP42-207ENST00000521713 CRYMQ14894 314 aa17.01■□□□□ 0.31
USP42-207ENST00000521713 ICA1LQ8NDH6 482 aa17.01■□□□□ 0.31
USP42-207ENST00000521713 SRGAP2O75044 1071 aa17.01■□□□□ 0.31
USP42-207ENST00000521713 SULT1E1P49888 294 aa17.01■□□□□ 0.31
USP42-207ENST00000521713 ZNF211Q13398 564 aaPredicted RBP17.01■□□□□ 0.31
USP42-207ENST00000521713 DHX34Q14147 1143 aaKnown RBP17.01■□□□□ 0.31
USP42-207ENST00000521713 VGLL2Q8N8G2 317 aa17.01■□□□□ 0.31
USP42-207ENST00000521713 CCT8L2Q96SF2 557 aa17.01■□□□□ 0.31
USP42-207ENST00000521713 VTA1Q9NP79 307 aa17.01■□□□□ 0.31
USP42-207ENST00000521713 DDX4Q9NQI0 724 aaKnown RBP17.01■□□□□ 0.31
USP42-207ENST00000521713 GPRC5DQ9NZD1 345 aa17.01■□□□□ 0.31
USP42-207ENST00000521713 PIGHQ14442 188 aaPredicted RBP17.01■□□□□ 0.31
USP42-207ENST00000521713 E4F1Q66K89 784 aaPredicted RBP17.01■□□□□ 0.31
USP42-207ENST00000521713 TGS1Q96RS0 853 aaKnown RBP17.01■□□□□ 0.31
USP42-207ENST00000521713 ABHD16BQ9H3Z7 469 aa17.01■□□□□ 0.31
USP42-207ENST00000521713 AGTP01019 485 aa17.01■□□□□ 0.31
USP42-207ENST00000521713 KLRC1P26715 233 aa17.01■□□□□ 0.31
USP42-207ENST00000521713 SENP7Q9BQF6 1050 aa17.01■□□□□ 0.31
USP42-207ENST00000521713 COPEO14579 308 aa17■□□□□ 0.31
USP42-207ENST00000521713 CCDC22O60826 627 aa17■□□□□ 0.31
USP42-207ENST00000521713 NCF2P19878 526 aaPredicted RBP17■□□□□ 0.31
USP42-207ENST00000521713 LRRC4BQ9NT99 713 aa17■□□□□ 0.31
USP42-207ENST00000521713 MOSPD1Q9UJG1 213 aa17■□□□□ 0.31
USP42-207ENST00000521713 AP3B1O00203 1094 aa17■□□□□ 0.31
USP42-207ENST00000521713 MED24O75448 989 aa17■□□□□ 0.31
USP42-207ENST00000521713 GARTP22102 1010 aa17■□□□□ 0.31
USP42-207ENST00000521713 GNL1P36915 607 aaPredicted RBP17■□□□□ 0.31
USP42-207ENST00000521713 RGS7P49802 495 aa17■□□□□ 0.31
USP42-207ENST00000521713 TTC23LQ6PF05 361 aa17■□□□□ 0.31
USP42-207ENST00000521713 RCOR2Q8IZ40 523 aa17■□□□□ 0.31
USP42-207ENST00000521713 SPATA4Q8NEY3 305 aa17■□□□□ 0.31
USP42-207ENST00000521713 SLITRK1Q96PX8 696 aa17■□□□□ 0.31
USP42-207ENST00000521713 AGO4Q9HCK5 861 aaKnown RBP17■□□□□ 0.31
USP42-207ENST00000521713 STARD7Q9NQZ5 370 aa17■□□□□ 0.31
USP42-207ENST00000521713 BRAFP15056 766 aa17■□□□□ 0.31
USP42-207ENST00000521713 CLCN3P51790 818 aa17■□□□□ 0.31
USP42-207ENST00000521713 HDAC4P56524 1084 aa17■□□□□ 0.31
USP42-207ENST00000521713 TMPRSS15P98073 1019 aa17■□□□□ 0.31
USP42-207ENST00000521713 AGBL2Q5U5Z8 902 aa17■□□□□ 0.31
USP42-207ENST00000521713 NIPA1Q7RTP0 329 aa17■□□□□ 0.31
USP42-207ENST00000521713 SEPT8Q92599 483 aa17■□□□□ 0.31
USP42-207ENST00000521713 DNAJC17Q9NVM6 304 aaKnown RBP17■□□□□ 0.31
USP42-207ENST00000521713 ZC3H4Q9UPT8 1303 aaKnown RBP17■□□□□ 0.31
USP42-207ENST00000521713 H3BRB1 525 aa16.99■□□□□ 0.31
USP42-207ENST00000521713 MGAT5BQ3V5L5 792 aa16.99■□□□□ 0.31
USP42-207ENST00000521713 GIPC2Q8TF65 315 aa16.99■□□□□ 0.31
USP42-207ENST00000521713 SEPT5Q99719 369 aaPredicted RBP16.99■□□□□ 0.31
USP42-207ENST00000521713 RUSC1Q9BVN2 902 aa16.99■□□□□ 0.31
USP42-207ENST00000521713 AGXT2Q9BYV1 514 aa16.99■□□□□ 0.31
USP42-207ENST00000521713 ASCC2Q9H1I8 757 aaPredicted RBP16.99■□□□□ 0.31
USP42-207ENST00000521713 TUT1Q9H6E5 874 aaKnown RBP16.99■□□□□ 0.31
USP42-207ENST00000521713 HSPA9P38646 679 aaKnown RBP16.99■□□□□ 0.31
USP42-207ENST00000521713 ARFIP2P53365 341 aa16.99■□□□□ 0.31
USP42-207ENST00000521713 PTPAQ15257 358 aa16.99■□□□□ 0.31
USP42-207ENST00000521713 EFHC1Q5JVL4 640 aa16.99■□□□□ 0.31
USP42-207ENST00000521713 PID1Q7Z2X4 250 aa16.99■□□□□ 0.31
USP42-207ENST00000521713 KCNV2Q8TDN2 545 aa16.99■□□□□ 0.31
USP42-207ENST00000521713 THOC1Q96FV9 657 aaKnown RBP16.99■□□□□ 0.31
USP42-207ENST00000521713 P2RX7Q99572 595 aaKnown RBP16.99■□□□□ 0.31
USP42-207ENST00000521713 TRPC7Q9HCX4 862 aa16.99■□□□□ 0.31
USP42-207ENST00000521713 ODC1P11926 461 aa16.99■□□□□ 0.31
USP42-207ENST00000521713 ALDH1A3P47895 512 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms