RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 PJA2O43164 708 aa4.2□□□□□ -1.74
HMGN1P28-201ENST00000521340 KCNQ3O43525 872 aa4.2□□□□□ -1.74
HMGN1P28-201ENST00000521340 CNOT4O95628 575 aaKnown RBP4.2□□□□□ -1.74
HMGN1P28-201ENST00000521340 MT-ND5P03915 603 aa4.2□□□□□ -1.74
HMGN1P28-201ENST00000521340 PARP1P09874 1014 aaKnown RBP4.2□□□□□ -1.74
HMGN1P28-201ENST00000521340 BRAFP15056 766 aa4.2□□□□□ -1.74
HMGN1P28-201ENST00000521340 CHKAP35790 457 aa4.2□□□□□ -1.74
HMGN1P28-201ENST00000521340 GRK6P43250 576 aa4.2□□□□□ -1.74
HMGN1P28-201ENST00000521340 MEOX1P50221 254 aa4.2□□□□□ -1.74
HMGN1P28-201ENST00000521340 TOB1P50616 345 aaPredicted RBP4.2□□□□□ -1.74
HMGN1P28-201ENST00000521340 RRADP55042 308 aa4.2□□□□□ -1.74
HMGN1P28-201ENST00000521340 PUM3Q15397 648 aaKnown RBP4.2□□□□□ -1.74
HMGN1P28-201ENST00000521340 BMT2Q1RMZ1 405 aa4.2□□□□□ -1.74
HMGN1P28-201ENST00000521340 ARL13BQ3SXY8 428 aa4.2□□□□□ -1.74
HMGN1P28-201ENST00000521340 CATSPERGQ6ZRH7 1159 aa4.2□□□□□ -1.74
HMGN1P28-201ENST00000521340 PPP1R32Q7Z5V6 425 aa4.2□□□□□ -1.74
HMGN1P28-201ENST00000521340 PDSS2Q86YH6 399 aa4.2□□□□□ -1.74
HMGN1P28-201ENST00000521340 TMEM151BQ8IW70 566 aa4.2□□□□□ -1.74
HMGN1P28-201ENST00000521340 ZNF384Q8TF68 577 aa4.2□□□□□ -1.74
HMGN1P28-201ENST00000521340 RPL10LQ96L21 214 aaKnown RBP4.2□□□□□ -1.74
HMGN1P28-201ENST00000521340 UHRF1Q96T88 793 aaPredicted RBP4.2□□□□□ -1.74
HMGN1P28-201ENST00000521340 VKORC1Q9BQB6 163 aa4.2□□□□□ -1.74
HMGN1P28-201ENST00000521340 CHST8Q9H2A9 424 aa4.2□□□□□ -1.74
HMGN1P28-201ENST00000521340 ARFGAP3Q9NP61 516 aa4.2□□□□□ -1.74
HMGN1P28-201ENST00000521340 MRPS18AQ9NVS2 196 aaKnown RBP4.2□□□□□ -1.74
HMGN1P28-201ENST00000521340 RLIMQ9NVW2 624 aa4.2□□□□□ -1.74
HMGN1P28-201ENST00000521340 FBXO34Q9NWN3 711 aa4.2□□□□□ -1.74
HMGN1P28-201ENST00000521340 JKAMPQ9P055 326 aa4.2□□□□□ -1.74
HMGN1P28-201ENST00000521340 NTMQ9P121 344 aa4.2□□□□□ -1.74
HMGN1P28-201ENST00000521340 OGDHLQ9ULD0 1010 aa4.2□□□□□ -1.74
HMGN1P28-201ENST00000521340 CAPN11Q9UMQ6 739 aa4.2□□□□□ -1.74
HMGN1P28-201ENST00000521340 RUVBL1Q9Y265 456 aaKnown RBP4.2□□□□□ -1.74
HMGN1P28-201ENST00000521340 SNX13Q9Y5W8 968 aa4.2□□□□□ -1.74
HMGN1P28-201ENST00000521340 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.2□□□□□ -1.74
HMGN1P28-201ENST00000521340 OTOL1A6NHN0 477 aaPredicted RBP4.19□□□□□ -1.74
HMGN1P28-201ENST00000521340 TMEM233B4DJY2 109 aa4.19□□□□□ -1.74
HMGN1P28-201ENST00000521340 NPC1O15118 1278 aa4.19□□□□□ -1.74
HMGN1P28-201ENST00000521340 TEX33O43247 280 aa4.19□□□□□ -1.74
HMGN1P28-201ENST00000521340 SLC26A4O43511 780 aa4.19□□□□□ -1.74
HMGN1P28-201ENST00000521340 B4GALT3O60512 393 aa4.19□□□□□ -1.74
HMGN1P28-201ENST00000521340 SASH1O94885 1247 aa4.19□□□□□ -1.74
HMGN1P28-201ENST00000521340 PRSS23O95084 383 aa4.19□□□□□ -1.74
HMGN1P28-201ENST00000521340 GJB1P08034 283 aa4.19□□□□□ -1.74
HMGN1P28-201ENST00000521340 EEF1GP26641 437 aaKnown RBP4.19□□□□□ -1.74
HMGN1P28-201ENST00000521340 GABRB3P28472 473 aa4.19□□□□□ -1.74
HMGN1P28-201ENST00000521340 PHKA1P46020 1223 aa4.19□□□□□ -1.74
HMGN1P28-201ENST00000521340 ELF2Q15723 593 aa4.19□□□□□ -1.74
HMGN1P28-201ENST00000521340 VMACQ2NL98 169 aa4.19□□□□□ -1.74
HMGN1P28-201ENST00000521340 HSP90AB4PQ58FF6 505 aa4.19□□□□□ -1.74
HMGN1P28-201ENST00000521340 CRB2Q5IJ48 1285 aa4.19□□□□□ -1.74
HMGN1P28-201ENST00000521340 SUGP1Q8IWZ8 645 aaKnown RBP4.19□□□□□ -1.74
HMGN1P28-201ENST00000521340 ZFPM1Q8IX07 1006 aa4.19□□□□□ -1.74
HMGN1P28-201ENST00000521340 TNPO1Q92973 898 aaKnown RBP4.19□□□□□ -1.74
HMGN1P28-201ENST00000521340 SNX22Q96L94 193 aa4.19□□□□□ -1.74
HMGN1P28-201ENST00000521340 CDC5LQ99459 802 aaKnown RBP4.19□□□□□ -1.74
HMGN1P28-201ENST00000521340 ZNF518BQ9C0D4 1074 aa4.19□□□□□ -1.74
HMGN1P28-201ENST00000521340 PNPLA8Q9NP80 782 aa4.19□□□□□ -1.74
HMGN1P28-201ENST00000521340 IL23AQ9NPF7 189 aa4.19□□□□□ -1.74
HMGN1P28-201ENST00000521340 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.19□□□□□ -1.74
HMGN1P28-201ENST00000521340 SACM1LQ9NTJ5 587 aa4.19□□□□□ -1.74
HMGN1P28-201ENST00000521340 MOCS1Q9NZB8 636 aa4.19□□□□□ -1.74
HMGN1P28-201ENST00000521340 LRCH1Q9Y2L9 728 aa4.19□□□□□ -1.74
HMGN1P28-201ENST00000521340 UBE2QL1A1L167 161 aa4.18□□□□□ -1.74
HMGN1P28-201ENST00000521340 FAM234BA2RU67 622 aa4.18□□□□□ -1.74
HMGN1P28-201ENST00000521340 GOLGA6L3A6NEY3 463 aa4.18□□□□□ -1.74
HMGN1P28-201ENST00000521340 TBKBP1A7MCY6 615 aa4.18□□□□□ -1.74
HMGN1P28-201ENST00000521340 NRP1O14786 923 aa4.18□□□□□ -1.74
HMGN1P28-201ENST00000521340 NOBOXO60393 691 aa4.18□□□□□ -1.74
HMGN1P28-201ENST00000521340 CSTBP04080 98 aaKnown RBP4.18□□□□□ -1.74
HMGN1P28-201ENST00000521340 A1BGP04217 495 aa4.18□□□□□ -1.74
HMGN1P28-201ENST00000521340 ANXA2P07355 339 aaKnown RBP4.18□□□□□ -1.74
HMGN1P28-201ENST00000521340 RARBP10826 455 aa4.18□□□□□ -1.74
HMGN1P28-201ENST00000521340 MTHFD1P11586 935 aaKnown RBP4.18□□□□□ -1.74
HMGN1P28-201ENST00000521340 TECP42680 631 aa4.18□□□□□ -1.74
HMGN1P28-201ENST00000521340 ALDH9A1P49189 494 aa4.18□□□□□ -1.74
HMGN1P28-201ENST00000521340 SLC11A2P49281 568 aa4.18□□□□□ -1.74
HMGN1P28-201ENST00000521340 AFF3P51826 1226 aaKnown RBP4.18□□□□□ -1.74
HMGN1P28-201ENST00000521340 KRTAP10-2P60368 255 aa4.18□□□□□ -1.74
HMGN1P28-201ENST00000521340 POU5F1BQ06416 359 aa4.18□□□□□ -1.74
HMGN1P28-201ENST00000521340 FOXO1Q12778 655 aa4.18□□□□□ -1.74
HMGN1P28-201ENST00000521340 SLC13A2Q13183 592 aa4.18□□□□□ -1.74
HMGN1P28-201ENST00000521340 RIN1Q13671 783 aa4.18□□□□□ -1.74
HMGN1P28-201ENST00000521340 BOP1Q14137 746 aaKnown RBP4.18□□□□□ -1.74
HMGN1P28-201ENST00000521340 NFIXQ14938 502 aa4.18□□□□□ -1.74
HMGN1P28-201ENST00000521340 UBXN2BQ14CS0 331 aa4.18□□□□□ -1.74
HMGN1P28-201ENST00000521340 NPY5RQ15761 445 aa4.18□□□□□ -1.74
HMGN1P28-201ENST00000521340 FAM214AQ32MH5 1076 aa4.18□□□□□ -1.74
HMGN1P28-201ENST00000521340 ZMAT1Q5H9K5 638 aa4.18□□□□□ -1.74
HMGN1P28-201ENST00000521340 KIAA0408Q6ZU52 694 aa4.18□□□□□ -1.74
HMGN1P28-201ENST00000521340 UNC13DQ70J99 1090 aa4.18□□□□□ -1.74
HMGN1P28-201ENST00000521340 ZNF365Q70YC5 407 aa4.18□□□□□ -1.74
HMGN1P28-201ENST00000521340 PDZD4Q76G19 769 aaPredicted RBP4.18□□□□□ -1.74
HMGN1P28-201ENST00000521340 MYLK4Q86YV6 388 aaPredicted RBP4.18□□□□□ -1.74
HMGN1P28-201ENST00000521340 SYTL1Q8IYJ3 562 aa4.18□□□□□ -1.74
HMGN1P28-201ENST00000521340 IL17REQ8NFR9 667 aa4.18□□□□□ -1.74
HMGN1P28-201ENST00000521340 OR6B3Q8NGW1 331 aa4.18□□□□□ -1.74
HMGN1P28-201ENST00000521340 PNISRQ8TF01 805 aaKnown RBP4.18□□□□□ -1.74
HMGN1P28-201ENST00000521340 TBC1D20Q96BZ9 403 aa4.18□□□□□ -1.74
HMGN1P28-201ENST00000521340 LRIG1Q96JA1 1093 aa4.18□□□□□ -1.74
HMGN1P28-201ENST00000521340 BARX1Q9HBU1 254 aaPredicted RBP4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms