RNA–Protein interactions for RNA: ENST00000520776.5

EFCAB13-208, Transcript of EF-hand calcium binding domain 13, humanhuman

TSL 2

Gene EFCAB13, Length 1,979 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-208ENST00000520776 VPS11Q9H270 941 aa4.35□□□□□ -1.71
EFCAB13-208ENST00000520776 SEC61A2Q9H9S3 476 aa4.35□□□□□ -1.71
EFCAB13-208ENST00000520776 GNL3LQ9NVN8 582 aaKnown RBP4.35□□□□□ -1.71
EFCAB13-208ENST00000520776 FAM30AQ9NZY2 134 aa4.35□□□□□ -1.71
EFCAB13-208ENST00000520776 PADI4Q9UM07 663 aa4.35□□□□□ -1.71
EFCAB13-208ENST00000520776 MED16Q9Y2X0 877 aa4.35□□□□□ -1.71
EFCAB13-208ENST00000520776 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.35□□□□□ -1.71
EFCAB13-208ENST00000520776 PJA2O43164 708 aa4.34□□□□□ -1.71
EFCAB13-208ENST00000520776 ATP5JP18859 108 aa4.34□□□□□ -1.71
EFCAB13-208ENST00000520776 CREMQ03060 361 aa4.34□□□□□ -1.71
EFCAB13-208ENST00000520776 DUSP8Q13202 625 aa4.34□□□□□ -1.71
EFCAB13-208ENST00000520776 CSRP2Q16527 193 aa4.34□□□□□ -1.71
EFCAB13-208ENST00000520776 FAM214AQ32MH5 1076 aa4.34□□□□□ -1.71
EFCAB13-208ENST00000520776 TUBB8Q3ZCM7 444 aa4.34□□□□□ -1.71
EFCAB13-208ENST00000520776 LIX1LQ8IVB5 337 aa4.34□□□□□ -1.71
EFCAB13-208ENST00000520776 SHCBP1Q8NEM2 672 aa4.34□□□□□ -1.71
EFCAB13-208ENST00000520776 EVI5LQ96CN4 794 aa4.34□□□□□ -1.71
EFCAB13-208ENST00000520776 ZC3H10Q96K80 434 aaKnown RBP4.34□□□□□ -1.71
EFCAB13-208ENST00000520776 CRB3Q9BUF7 120 aa4.34□□□□□ -1.71
EFCAB13-208ENST00000520776 COLEC11Q9BWP8 271 aa4.34□□□□□ -1.71
EFCAB13-208ENST00000520776 CERS4Q9HA82 394 aa4.34□□□□□ -1.71
EFCAB13-208ENST00000520776 MSL2Q9HCI7 577 aa4.34□□□□□ -1.71
EFCAB13-208ENST00000520776 SACM1LQ9NTJ5 587 aa4.34□□□□□ -1.71
EFCAB13-208ENST00000520776 PPP4R1LQ9P1A2 415 aa4.34□□□□□ -1.71
EFCAB13-208ENST00000520776 SLC45A2Q9UMX9 530 aa4.34□□□□□ -1.71
EFCAB13-208ENST00000520776 TSC22D4Q9Y3Q8 395 aa4.34□□□□□ -1.71
EFCAB13-208ENST00000520776 TBKBP1A7MCY6 615 aa4.34□□□□□ -1.71
EFCAB13-208ENST00000520776 BTN3A1O00481 513 aa4.34□□□□□ -1.71
EFCAB13-208ENST00000520776 KIAA0391O15091 583 aaKnown RBP4.34□□□□□ -1.71
EFCAB13-208ENST00000520776 PIP5K1CO60331 668 aa4.34□□□□□ -1.71
EFCAB13-208ENST00000520776 ABHD16AO95870 558 aa4.34□□□□□ -1.71
EFCAB13-208ENST00000520776 TYRP1P17643 537 aa4.34□□□□□ -1.71
EFCAB13-208ENST00000520776 TNFRSF1AP19438 455 aa4.34□□□□□ -1.71
EFCAB13-208ENST00000520776 HALP42357 657 aa4.34□□□□□ -1.71
EFCAB13-208ENST00000520776 NOMO3P69849 1222 aa4.34□□□□□ -1.71
EFCAB13-208ENST00000520776 PUM1Q14671 1186 aaKnown RBP eCLIP4.34□□□□□ -1.71
EFCAB13-208ENST00000520776 ATP2B3Q16720 1220 aa4.34□□□□□ -1.71
EFCAB13-208ENST00000520776 BMT2Q1RMZ1 405 aa4.34□□□□□ -1.71
EFCAB13-208ENST00000520776 KLHDC7AQ5VTJ3 777 aa4.34□□□□□ -1.71
EFCAB13-208ENST00000520776 GPRIN1Q7Z2K8 1008 aa4.34□□□□□ -1.71
EFCAB13-208ENST00000520776 UBE3BQ7Z3V4 1068 aa4.34□□□□□ -1.71
EFCAB13-208ENST00000520776 MICU3Q86XE3 530 aa4.34□□□□□ -1.71
EFCAB13-208ENST00000520776 GIMAP8Q8ND71 665 aaPredicted RBP4.34□□□□□ -1.71
EFCAB13-208ENST00000520776 DNERQ8NFT8 737 aa4.34□□□□□ -1.71
EFCAB13-208ENST00000520776 OR6B3Q8NGW1 331 aa4.34□□□□□ -1.71
EFCAB13-208ENST00000520776 NEIL1Q96FI4 390 aaPredicted RBP4.34□□□□□ -1.71
EFCAB13-208ENST00000520776 TCF25Q9BQ70 676 aa4.34□□□□□ -1.71
EFCAB13-208ENST00000520776 ARFGAP3Q9NP61 516 aa4.34□□□□□ -1.71
EFCAB13-208ENST00000520776 PNPLA8Q9NP80 782 aa4.34□□□□□ -1.71
EFCAB13-208ENST00000520776 SLAMF7Q9NQ25 335 aa4.34□□□□□ -1.71
EFCAB13-208ENST00000520776 JKAMPQ9P055 326 aa4.34□□□□□ -1.71
EFCAB13-208ENST00000520776 AFF4Q9UHB7 1163 aaKnown RBP4.34□□□□□ -1.71
EFCAB13-208ENST00000520776 CDC23Q9UJX2 597 aa4.34□□□□□ -1.71
EFCAB13-208ENST00000520776 TRIM43BA6NCK2 446 aa4.33□□□□□ -1.72
EFCAB13-208ENST00000520776 GJB1P08034 283 aa4.33□□□□□ -1.72
EFCAB13-208ENST00000520776 SNRPA1P09661 255 aaKnown RBP4.33□□□□□ -1.72
EFCAB13-208ENST00000520776 PARP1P09874 1014 aaKnown RBP4.33□□□□□ -1.72
EFCAB13-208ENST00000520776 CLRN1P58418 232 aa4.33□□□□□ -1.72
EFCAB13-208ENST00000520776 RAC3P60763 192 aa4.33□□□□□ -1.72
EFCAB13-208ENST00000520776 CTBP1Q13363 440 aa4.33□□□□□ -1.72
EFCAB13-208ENST00000520776 UBXN2BQ14CS0 331 aa4.33□□□□□ -1.72
EFCAB13-208ENST00000520776 ZNF529Q6P280 563 aa4.33□□□□□ -1.72
EFCAB13-208ENST00000520776 XYLT1Q86Y38 959 aa4.33□□□□□ -1.72
EFCAB13-208ENST00000520776 ATP11CQ8NB49 1132 aa4.33□□□□□ -1.72
EFCAB13-208ENST00000520776 TRIM43Q96BQ3 446 aaPredicted RBP4.33□□□□□ -1.72
EFCAB13-208ENST00000520776 DPYSL5Q9BPU6 564 aa4.33□□□□□ -1.72
EFCAB13-208ENST00000520776 HERPUD2Q9BSE4 406 aa4.33□□□□□ -1.72
EFCAB13-208ENST00000520776 LSM14BQ9BX40 385 aaKnown RBP4.33□□□□□ -1.72
EFCAB13-208ENST00000520776 GSTO2Q9H4Y5 243 aa4.33□□□□□ -1.72
EFCAB13-208ENST00000520776 BRD9Q9H8M2 597 aa4.33□□□□□ -1.72
EFCAB13-208ENST00000520776 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.33□□□□□ -1.72
EFCAB13-208ENST00000520776 FBXO34Q9NWN3 711 aa4.33□□□□□ -1.72
EFCAB13-208ENST00000520776 A0A1W2PPC4 97 aa4.33□□□□□ -1.72
EFCAB13-208ENST00000520776 APOL1O14791 398 aa4.33□□□□□ -1.72
EFCAB13-208ENST00000520776 TBC1D4O60343 1298 aa4.33□□□□□ -1.72
EFCAB13-208ENST00000520776 NBNO60934 754 aa4.33□□□□□ -1.72
EFCAB13-208ENST00000520776 DNAJB5O75953 348 aa4.33□□□□□ -1.72
EFCAB13-208ENST00000520776 AMHP03971 560 aa4.33□□□□□ -1.72
EFCAB13-208ENST00000520776 KCNJ5P48544 419 aa4.33□□□□□ -1.72
EFCAB13-208ENST00000520776 SELENOPP49908 381 aa4.33□□□□□ -1.72
EFCAB13-208ENST00000520776 RPS16P62249 146 aaKnown RBP4.33□□□□□ -1.72
EFCAB13-208ENST00000520776 PMS2P11Q13670 270 aa4.33□□□□□ -1.72
EFCAB13-208ENST00000520776 ZNF568Q3ZCX4 644 aa4.33□□□□□ -1.72
EFCAB13-208ENST00000520776 FAM111BQ6SJ93 734 aa4.33□□□□□ -1.72
EFCAB13-208ENST00000520776 PDSS2Q86YH6 399 aa4.33□□□□□ -1.72
EFCAB13-208ENST00000520776 MYLK4Q86YV6 388 aaPredicted RBP4.33□□□□□ -1.72
EFCAB13-208ENST00000520776 NLGN4YQ8NFZ3 816 aaPredicted RBP4.33□□□□□ -1.72
EFCAB13-208ENST00000520776 ZNF512Q96ME7 567 aaPredicted RBP4.33□□□□□ -1.72
EFCAB13-208ENST00000520776 BRIP1Q9BX63 1249 aa4.33□□□□□ -1.72
EFCAB13-208ENST00000520776 C12orf65Q9H3J6 166 aaKnown RBP4.33□□□□□ -1.72
EFCAB13-208ENST00000520776 TMPRSS5Q9H3S3 457 aa4.33□□□□□ -1.72
EFCAB13-208ENST00000520776 GJB4Q9NTQ9 266 aa4.33□□□□□ -1.72
EFCAB13-208ENST00000520776 RLIMQ9NVW2 624 aa4.33□□□□□ -1.72
EFCAB13-208ENST00000520776 CFAP97Q9P2B7 532 aa4.33□□□□□ -1.72
EFCAB13-208ENST00000520776 LRCH1Q9Y2L9 728 aa4.33□□□□□ -1.72
EFCAB13-208ENST00000520776 PCDHGB2Q9Y5G2 931 aa4.33□□□□□ -1.72
EFCAB13-208ENST00000520776 A0A1W2PRX2 142 aa4.32□□□□□ -1.72
EFCAB13-208ENST00000520776 B5MCH6 92 aa4.32□□□□□ -1.72
EFCAB13-208ENST00000520776 MATN3O15232 486 aa4.32□□□□□ -1.72
EFCAB13-208ENST00000520776 POMCP01189 267 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms