RNA–Protein interactions for RNA: ENST00000520497.1

VAPB-206, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 937 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-206ENST00000520497 SZT2Q5T011 3432 aa9.16□□□□□ -0.94
VAPB-206ENST00000520497 PATJQ8NI35 1801 aa9.15□□□□□ -0.94
VAPB-206ENST00000520497 SSU72P8A0A1W2PR75 194 aa9.15□□□□□ -0.94
VAPB-206ENST00000520497 ARL5CA6NH57 179 aa9.15□□□□□ -0.94
VAPB-206ENST00000520497 SOWAHDA6NJG2 315 aa9.15□□□□□ -0.94
VAPB-206ENST00000520497 TULP1O00294 542 aaPredicted RBP9.15□□□□□ -0.94
VAPB-206ENST00000520497 FOXN3O00409 490 aaPredicted RBP9.15□□□□□ -0.94
VAPB-206ENST00000520497 XPOTO43592 962 aaKnown RBP9.15□□□□□ -0.94
VAPB-206ENST00000520497 EOMESO95936 686 aa9.15□□□□□ -0.94
VAPB-206ENST00000520497 PNMA6AP0CW24 399 aaPredicted RBP9.15□□□□□ -0.94
VAPB-206ENST00000520497 TBXAS1P24557 533 aaPredicted RBP9.15□□□□□ -0.94
VAPB-206ENST00000520497 ITGB8P26012 769 aa9.15□□□□□ -0.94
VAPB-206ENST00000520497 LRPAP1P30533 357 aa9.15□□□□□ -0.94
VAPB-206ENST00000520497 POLR2BP30876 1174 aaKnown RBP9.15□□□□□ -0.94
VAPB-206ENST00000520497 ATICP31939 592 aa9.15□□□□□ -0.94
VAPB-206ENST00000520497 RFC2P35250 354 aa9.15□□□□□ -0.94
VAPB-206ENST00000520497 SOX5P35711 763 aa9.15□□□□□ -0.94
VAPB-206ENST00000520497 MLH1P40692 756 aa9.15□□□□□ -0.94
VAPB-206ENST00000520497 STAT1P42224 750 aa9.15□□□□□ -0.94
VAPB-206ENST00000520497 ASPAP45381 313 aa9.15□□□□□ -0.94
VAPB-206ENST00000520497 CCL23P55773 120 aa9.15□□□□□ -0.94
VAPB-206ENST00000520497 SOX4Q06945 474 aaPredicted RBP9.15□□□□□ -0.94
VAPB-206ENST00000520497 TRPC3Q13507 836 aa9.15□□□□□ -0.94
VAPB-206ENST00000520497 CUL2Q13617 745 aa9.15□□□□□ -0.94
VAPB-206ENST00000520497 SPA17Q15506 151 aa9.15□□□□□ -0.94
VAPB-206ENST00000520497 ARHGAP44Q17R89 818 aa9.15□□□□□ -0.94
VAPB-206ENST00000520497 ZNF699Q32M78 642 aa9.15□□□□□ -0.94
VAPB-206ENST00000520497 C9orf57Q5W0N0 161 aa9.15□□□□□ -0.94
VAPB-206ENST00000520497 RAD9BQ6WBX8 426 aa9.15□□□□□ -0.94
VAPB-206ENST00000520497 Q7L0L9 218 aa9.15□□□□□ -0.94
VAPB-206ENST00000520497 IRF2BP2Q7Z5L9 587 aa9.15□□□□□ -0.94
VAPB-206ENST00000520497 VPS36Q86VN1 386 aa9.15□□□□□ -0.94
VAPB-206ENST00000520497 FAM71AQ8IYT1 594 aa9.15□□□□□ -0.94
VAPB-206ENST00000520497 CRIPAKQ8N1N5 446 aa9.15□□□□□ -0.94
VAPB-206ENST00000520497 BEST2Q8NFU1 509 aa9.15□□□□□ -0.94
VAPB-206ENST00000520497 OLIG1Q8TAK6 271 aa9.15□□□□□ -0.94
VAPB-206ENST00000520497 SEPT8Q92599 483 aa9.15□□□□□ -0.94
VAPB-206ENST00000520497 C18orf25Q96B23 403 aaPredicted RBP9.15□□□□□ -0.94
VAPB-206ENST00000520497 PGBD4Q96DM1 585 aa9.15□□□□□ -0.94
VAPB-206ENST00000520497 GAD1Q99259 594 aa9.15□□□□□ -0.94
VAPB-206ENST00000520497 ARID3AQ99856 593 aa9.15□□□□□ -0.94
VAPB-206ENST00000520497 BCO2Q9BYV7 579 aa9.15□□□□□ -0.94
VAPB-206ENST00000520497 NIF3L1Q9GZT8 377 aa9.15□□□□□ -0.94
VAPB-206ENST00000520497 ELAC1Q9H777 363 aaKnown RBP9.15□□□□□ -0.94
VAPB-206ENST00000520497 UBN1Q9NPG3 1134 aa9.15□□□□□ -0.94
VAPB-206ENST00000520497 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.15□□□□□ -0.942e-6■■■■■ 124.7
VAPB-206ENST00000520497 MIOSQ9NXC5 875 aa9.15□□□□□ -0.94
VAPB-206ENST00000520497 CNTN6Q9UQ52 1028 aa9.15□□□□□ -0.94
VAPB-206ENST00000520497 PPP2R2CQ9Y2T4 447 aa9.15□□□□□ -0.94
VAPB-206ENST00000520497 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.15□□□□□ -0.94
VAPB-206ENST00000520497 BZW2Q9Y6E2 419 aaKnown RBP9.15□□□□□ -0.94
VAPB-206ENST00000520497 RANBP2P49792 3224 aaKnown RBP9.15□□□□□ -0.94
VAPB-206ENST00000520497 ZNF638Q14966 1978 aaKnown RBP9.14□□□□□ -0.95
VAPB-206ENST00000520497 TRIM43BA6NCK2 446 aa9.14□□□□□ -0.95
VAPB-206ENST00000520497 PIRO00625 290 aa9.14□□□□□ -0.95
VAPB-206ENST00000520497 ENPP3O14638 875 aa9.14□□□□□ -0.95
VAPB-206ENST00000520497 PPEF2O14830 753 aa9.14□□□□□ -0.95
VAPB-206ENST00000520497 OFD1O75665 1012 aa9.14□□□□□ -0.95
VAPB-206ENST00000520497 TIMP1P01033 207 aa9.14□□□□□ -0.95
VAPB-206ENST00000520497 SERPING1P05155 500 aa9.14□□□□□ -0.95
VAPB-206ENST00000520497 PLEKP08567 350 aaPredicted RBP9.14□□□□□ -0.95
VAPB-206ENST00000520497 KRT19P08727 400 aa9.14□□□□□ -0.95
VAPB-206ENST00000520497 FERP16591 822 aa9.14□□□□□ -0.95
VAPB-206ENST00000520497 ACO1P21399 889 aaKnown RBP9.14□□□□□ -0.95
VAPB-206ENST00000520497 SCNN1GP51170 649 aa9.14□□□□□ -0.95
VAPB-206ENST00000520497 AFF1P51825 1210 aaKnown RBP9.14□□□□□ -0.95
VAPB-206ENST00000520497 RBP5P82980 135 aa9.14□□□□□ -0.95
VAPB-206ENST00000520497 GRIK3Q13003 919 aa9.14□□□□□ -0.95
VAPB-206ENST00000520497 MTF1Q14872 753 aa9.14□□□□□ -0.95
VAPB-206ENST00000520497 ASIC2Q16515 512 aa9.14□□□□□ -0.95
VAPB-206ENST00000520497 ASTE1Q2TB18 679 aaPredicted RBP9.14□□□□□ -0.95
VAPB-206ENST00000520497 ARHGAP29Q52LW3 1261 aa9.14□□□□□ -0.95
VAPB-206ENST00000520497 TDRD12Q587J7 1177 aaKnown RBP9.14□□□□□ -0.95
VAPB-206ENST00000520497 LRRC52Q8N7C0 313 aa9.14□□□□□ -0.95
VAPB-206ENST00000520497 TRIM43Q96BQ3 446 aaPredicted RBP9.14□□□□□ -0.95
VAPB-206ENST00000520497 PPP1R13BQ96KQ4 1090 aa9.14□□□□□ -0.95
VAPB-206ENST00000520497 CCDC42Q96M95 316 aa9.14□□□□□ -0.95
VAPB-206ENST00000520497 C16orf45Q96MC5 204 aaPredicted RBP9.14□□□□□ -0.95
VAPB-206ENST00000520497 RPS6KC1Q96S38 1066 aa9.14□□□□□ -0.95
VAPB-206ENST00000520497 SYT11Q9BT88 431 aa9.14□□□□□ -0.95
VAPB-206ENST00000520497 NHEJ1Q9H9Q4 299 aaPredicted RBP9.14□□□□□ -0.95
VAPB-206ENST00000520497 RNF19AQ9NV58 838 aa9.14□□□□□ -0.95
VAPB-206ENST00000520497 SLC38A7Q9NVC3 462 aa9.14□□□□□ -0.95
VAPB-206ENST00000520497 TMEM161AQ9NX61 479 aa9.14□□□□□ -0.95
VAPB-206ENST00000520497 AGAP1Q9UPQ3 857 aa9.14□□□□□ -0.95
VAPB-206ENST00000520497 GREB1Q4ZG55 1949 aa9.13□□□□□ -0.95
VAPB-206ENST00000520497 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.13□□□□□ -0.95
VAPB-206ENST00000520497 GFPT2O94808 682 aa9.13□□□□□ -0.95
VAPB-206ENST00000520497 NDUFA10O95299 355 aa9.13□□□□□ -0.95
VAPB-206ENST00000520497 THP07101 528 aa9.13□□□□□ -0.95
VAPB-206ENST00000520497 TNNT1P13805 278 aa9.13□□□□□ -0.95
VAPB-206ENST00000520497 ANXA13P27216 316 aa9.13□□□□□ -0.95
VAPB-206ENST00000520497 ZNF132P52740 706 aa9.13□□□□□ -0.95
VAPB-206ENST00000520497 PTK2Q05397 1052 aa9.13□□□□□ -0.95
VAPB-206ENST00000520497 KLHL30Q0D2K2 578 aa9.13□□□□□ -0.95
VAPB-206ENST00000520497 WDR72Q3MJ13 1102 aa9.13□□□□□ -0.95
VAPB-206ENST00000520497 ZNF667Q5HYK9 610 aa9.13□□□□□ -0.95
VAPB-206ENST00000520497 CLLU1OSQ5K130 101 aa9.13□□□□□ -0.95
VAPB-206ENST00000520497 CNKSR3Q6P9H4 555 aa9.13□□□□□ -0.95
VAPB-206ENST00000520497 TOGARAM2Q6ZUX3 1019 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms