RNA–Protein interactions for RNA: ENST00000520133.5

COL13A1-212, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL13A1, Length 1,833 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-212ENST00000520133 SEC31AO94979 1220 aaKnown RBP28.76■■■□□ 2.19
COL13A1-212ENST00000520133 NPTXRO95502 500 aa28.76■■■□□ 2.19
COL13A1-212ENST00000520133 HOXA11P31270 313 aaPredicted RBP28.76■■■□□ 2.19
COL13A1-212ENST00000520133 NOMO3P69849 1222 aa28.76■■■□□ 2.19
COL13A1-212ENST00000520133 NOGQ13253 232 aa28.76■■■□□ 2.19
COL13A1-212ENST00000520133 MESDQ14696 234 aa28.76■■■□□ 2.19
COL13A1-212ENST00000520133 SCARA5Q6ZMJ2 495 aa28.76■■■□□ 2.19
COL13A1-212ENST00000520133 NME8Q8N427 588 aa28.76■■■□□ 2.19
COL13A1-212ENST00000520133 RASGEF1CQ8N431 466 aa28.76■■■□□ 2.19
COL13A1-212ENST00000520133 VCPIP1Q96JH7 1222 aa28.76■■■□□ 2.19
COL13A1-212ENST00000520133 ARHGAP39Q9C0H5 1083 aa28.76■■■□□ 2.19
COL13A1-212ENST00000520133 CARD9Q9H257 536 aa28.76■■■□□ 2.19
COL13A1-212ENST00000520133 PLEKHA5Q9HAU0 1116 aa28.76■■■□□ 2.19
COL13A1-212ENST00000520133 CDHR5Q9HBB8 845 aa28.76■■■□□ 2.19
COL13A1-212ENST00000520133 NXF1Q9UBU9 619 aaKnown RBP28.76■■■□□ 2.19
COL13A1-212ENST00000520133 RALGAPA2Q2PPJ7 1873 aa28.76■■■□□ 2.19
COL13A1-212ENST00000520133 WEE2P0C1S8 567 aa28.76■■■□□ 2.19
COL13A1-212ENST00000520133 FLT3LGP49771 235 aa28.76■■■□□ 2.19
COL13A1-212ENST00000520133 GJA9P57773 515 aa28.76■■■□□ 2.19
COL13A1-212ENST00000520133 RNASE9P60153 205 aaKnown RBP28.76■■■□□ 2.19
COL13A1-212ENST00000520133 WDR72Q3MJ13 1102 aa28.76■■■□□ 2.19
COL13A1-212ENST00000520133 C8orf74Q6P047 294 aa28.76■■■□□ 2.19
COL13A1-212ENST00000520133 UBL4BQ8N7F7 174 aa28.76■■■□□ 2.19
COL13A1-212ENST00000520133 TRIB2Q92519 343 aa28.76■■■□□ 2.19
COL13A1-212ENST00000520133 LRRC1Q9BTT6 524 aa28.76■■■□□ 2.19
COL13A1-212ENST00000520133 SPC25Q9HBM1 224 aa28.76■■■□□ 2.19
COL13A1-212ENST00000520133 CHORDC1Q9UHD1 332 aaPredicted RBP28.76■■■□□ 2.19
COL13A1-212ENST00000520133 ITGA11Q9UKX5 1188 aa28.76■■■□□ 2.19
COL13A1-212ENST00000520133 TMEM110-MUSTN1A8MSY1 372 aa28.75■■■□□ 2.19
COL13A1-212ENST00000520133 P4HA1P13674 534 aa28.75■■■□□ 2.19
COL13A1-212ENST00000520133 TNNC1P63316 161 aa28.75■■■□□ 2.19
COL13A1-212ENST00000520133 LIN9Q5TKA1 542 aa28.75■■■□□ 2.19
COL13A1-212ENST00000520133 VRTNQ9H8Y1 702 aa28.75■■■□□ 2.19
COL13A1-212ENST00000520133 GABRQQ9UN88 632 aa28.75■■■□□ 2.19
COL13A1-212ENST00000520133 CASP8AP2Q9UKL3 1982 aa28.75■■■□□ 2.19
COL13A1-212ENST00000520133 HOXC8P31273 242 aa28.74■■■□□ 2.19
COL13A1-212ENST00000520133 CLUL1Q15846 466 aa28.74■■■□□ 2.19
COL13A1-212ENST00000520133 LONRF2Q1L5Z9 754 aa28.74■■■□□ 2.19
COL13A1-212ENST00000520133 GNASQ5JWF2 1037 aa28.74■■■□□ 2.19
COL13A1-212ENST00000520133 MTG1Q9BT17 334 aaPredicted RBP28.74■■■□□ 2.19
COL13A1-212ENST00000520133 BCO2Q9BYV7 579 aa28.74■■■□□ 2.19
COL13A1-212ENST00000520133 TTC7AQ9ULT0 858 aaPredicted RBP28.74■■■□□ 2.19
COL13A1-212ENST00000520133 NOC2LQ9Y3T9 749 aaKnown RBP28.74■■■□□ 2.19
COL13A1-212ENST00000520133 YARSP54577 528 aaKnown RBP28.73■■■□□ 2.19
COL13A1-212ENST00000520133 ZNF200P98182 395 aaPredicted RBP28.73■■■□□ 2.19
COL13A1-212ENST00000520133 SNX17Q15036 470 aa28.73■■■□□ 2.19
COL13A1-212ENST00000520133 MAP9Q49MG5 647 aa28.73■■■□□ 2.19
COL13A1-212ENST00000520133 MON1BQ7L1V2 547 aa28.73■■■□□ 2.19
COL13A1-212ENST00000520133 PHF13Q86YI8 300 aaPredicted RBP28.73■■■□□ 2.19
COL13A1-212ENST00000520133 PASD1Q8IV76 773 aa28.73■■■□□ 2.19
COL13A1-212ENST00000520133 WNT8AQ9H1J5 351 aa28.73■■■□□ 2.19
COL13A1-212ENST00000520133 TMEM59LQ9UK28 342 aa28.73■■■□□ 2.19
COL13A1-212ENST00000520133 POLIQ9UNA4 740 aa28.73■■■□□ 2.19
COL13A1-212ENST00000520133 DERAQ9Y315 318 aa28.73■■■□□ 2.19
COL13A1-212ENST00000520133 LSM8O95777 96 aaKnown RBP28.73■■■□□ 2.19
COL13A1-212ENST00000520133 COMTP21964 271 aa28.73■■■□□ 2.19
COL13A1-212ENST00000520133 RBP5P82980 135 aa28.73■■■□□ 2.19
COL13A1-212ENST00000520133 ZNF394Q53GI3 561 aa28.73■■■□□ 2.19
COL13A1-212ENST00000520133 CXorf38Q8TB03 319 aa28.73■■■□□ 2.19
COL13A1-212ENST00000520133 KIF12Q96FN5 646 aa28.73■■■□□ 2.19
COL13A1-212ENST00000520133 TRIM6Q9C030 488 aaPredicted RBP28.73■■■□□ 2.19
COL13A1-212ENST00000520133 DPP3Q9NY33 737 aa28.73■■■□□ 2.19
COL13A1-212ENST00000520133 OGFRQ9NZT2 677 aa28.73■■■□□ 2.19
COL13A1-212ENST00000520133 ADAM22Q9P0K1 906 aa28.73■■■□□ 2.19
COL13A1-212ENST00000520133 CFHP08603 1231 aa28.72■■■□□ 2.19
COL13A1-212ENST00000520133 RRM1P23921 792 aa28.72■■■□□ 2.19
COL13A1-212ENST00000520133 POLR2BP30876 1174 aaKnown RBP28.72■■■□□ 2.19
COL13A1-212ENST00000520133 CRYBB1P53674 252 aaPredicted RBP28.72■■■□□ 2.19
COL13A1-212ENST00000520133 BEND6Q5SZJ8 279 aaPredicted RBP28.72■■■□□ 2.19
COL13A1-212ENST00000520133 TAF2Q6P1X5 1199 aa28.72■■■□□ 2.19
COL13A1-212ENST00000520133 NAP1L3Q99457 506 aaPredicted RBP28.72■■■□□ 2.19
COL13A1-212ENST00000520133 CYP3A43Q9HB55 503 aa28.72■■■□□ 2.19
COL13A1-212ENST00000520133 SCN10AQ9Y5Y9 1956 aa28.72■■■□□ 2.19
COL13A1-212ENST00000520133 MYADML2A6NDP7 307 aa28.71■■■□□ 2.19
COL13A1-212ENST00000520133 C1QBPQ07021 282 aaKnown RBP28.71■■■□□ 2.19
COL13A1-212ENST00000520133 REM2Q8IYK8 340 aaPredicted RBP28.71■■■□□ 2.19
COL13A1-212ENST00000520133 HPDLQ96IR7 371 aa28.71■■■□□ 2.19
COL13A1-212ENST00000520133 ZSWIM1Q9BR11 485 aa28.71■■■□□ 2.19
COL13A1-212ENST00000520133 ZNF518BQ9C0D4 1074 aa28.71■■■□□ 2.19
COL13A1-212ENST00000520133 UPF3AQ9H1J1 476 aaKnown RBP28.71■■■□□ 2.19
COL13A1-212ENST00000520133 MRPL47Q9HD33 250 aaKnown RBP28.71■■■□□ 2.19
COL13A1-212ENST00000520133 SNTG2Q9NY99 539 aa28.71■■■□□ 2.19
COL13A1-212ENST00000520133 AGAP1Q9UPQ3 857 aa28.71■■■□□ 2.19
COL13A1-212ENST00000520133 CCDC188H7C350 402 aa28.71■■■□□ 2.19
COL13A1-212ENST00000520133 SEPT4O43236 478 aa28.71■■■□□ 2.19
COL13A1-212ENST00000520133 SPOPO43791 374 aa28.71■■■□□ 2.19
COL13A1-212ENST00000520133 STAU1O95793 577 aaKnown RBP28.71■■■□□ 2.19
COL13A1-212ENST00000520133 RARBP10826 455 aa28.71■■■□□ 2.19
COL13A1-212ENST00000520133 C11orf70Q9BRQ4 267 aa28.71■■■□□ 2.19
COL13A1-212ENST00000520133 STIM2Q9P246 746 aa28.71■■■□□ 2.19
COL13A1-212ENST00000520133 ANAPC7Q9UJX3 599 aa28.71■■■□□ 2.19
COL13A1-212ENST00000520133 PCDHGC3Q9UN70 934 aa28.71■■■□□ 2.19
COL13A1-212ENST00000520133 CEP83Q9Y592 693 aa28.71■■■□□ 2.19
COL13A1-212ENST00000520133 BRD2P25440 801 aaKnown RBP28.7■■■□□ 2.18
COL13A1-212ENST00000520133 PRKCZQ05513 592 aa28.7■■■□□ 2.18
COL13A1-212ENST00000520133 TMEM35BQ8NCS4 154 aa28.7■■■□□ 2.18
COL13A1-212ENST00000520133 KRT12Q99456 494 aa28.7■■■□□ 2.18
COL13A1-212ENST00000520133 EIF2AQ9BY44 585 aaKnown RBP28.7■■■□□ 2.18
COL13A1-212ENST00000520133 FAM124BQ9H5Z6 455 aaPredicted RBP28.7■■■□□ 2.18
COL13A1-212ENST00000520133 PIN4Q9Y237 131 aaKnown RBP28.7■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms