RNA–Protein interactions for RNA: ENST00000518951.6

TOP1MT-206, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 5

Gene TOP1MT, Length 1,461 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-206ENST00000518951 NUB1Q9Y5A7 615 aa22.6■■□□□ 1.21
TOP1MT-206ENST00000518951 PRKCSHP14314 528 aaPredicted RBP22.59■■□□□ 1.21
TOP1MT-206ENST00000518951 KRT17Q04695 432 aa22.59■■□□□ 1.21
TOP1MT-206ENST00000518951 RNF214Q8ND24 703 aa22.59■■□□□ 1.21
TOP1MT-206ENST00000518951 POF1BQ8WVV4 589 aa22.59■■□□□ 1.21
TOP1MT-206ENST00000518951 HPDLQ96IR7 371 aa22.59■■□□□ 1.21
TOP1MT-206ENST00000518951 ZNF560Q96MR9 790 aa22.59■■□□□ 1.21
TOP1MT-206ENST00000518951 PI4K2AQ9BTU6 479 aa22.59■■□□□ 1.21
TOP1MT-206ENST00000518951 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.59■■□□□ 1.212e-6■■■■■ 103.8
TOP1MT-206ENST00000518951 LIMA1Q9UHB6 759 aaKnown RBP22.59■■□□□ 1.21
TOP1MT-206ENST00000518951 COQ4Q9Y3A0 265 aa22.59■■□□□ 1.21
TOP1MT-206ENST00000518951 TSC2P49815 1807 aa22.58■■□□□ 1.21
TOP1MT-206ENST00000518951 KPNA7A9QM74 516 aa22.58■■□□□ 1.2
TOP1MT-206ENST00000518951 CDK11BP21127 795 aaKnown RBP22.58■■□□□ 1.2
TOP1MT-206ENST00000518951 PIK3CAP42336 1068 aa22.58■■□□□ 1.2
TOP1MT-206ENST00000518951 ERVFC1P60507 584 aa22.58■■□□□ 1.2
TOP1MT-206ENST00000518951 VWA3BQ502W6 1294 aa22.58■■□□□ 1.2
TOP1MT-206ENST00000518951 FAM171A1Q5VUB5 890 aa22.58■■□□□ 1.2
TOP1MT-206ENST00000518951 FBXL13Q8NEE6 735 aa22.58■■□□□ 1.2
TOP1MT-206ENST00000518951 SUSD3Q96L08 255 aa22.58■■□□□ 1.2
TOP1MT-206ENST00000518951 SENP8Q96LD8 212 aa22.58■■□□□ 1.2
TOP1MT-206ENST00000518951 FAM161BQ96MY7 647 aa22.58■■□□□ 1.2
TOP1MT-206ENST00000518951 VPS16Q9H269 839 aa22.58■■□□□ 1.2
TOP1MT-206ENST00000518951 PRDM12Q9H4Q4 367 aa22.58■■□□□ 1.2
TOP1MT-206ENST00000518951 SF3B1O75533 1304 aaKnown RBP eCLIP22.57■■□□□ 1.28e-6■■■■■ 107
TOP1MT-206ENST00000518951 MYO7AQ13402 2215 aa22.57■■□□□ 1.2
TOP1MT-206ENST00000518951 PMM2O15305 246 aa22.57■■□□□ 1.2
TOP1MT-206ENST00000518951 PNPLA4P41247 253 aa22.57■■□□□ 1.2
TOP1MT-206ENST00000518951 FXR1P51114 621 aaKnown RBP eCLIP22.57■■□□□ 1.2
TOP1MT-206ENST00000518951 MYL7Q01449 175 aa22.57■■□□□ 1.2
TOP1MT-206ENST00000518951 SV2CQ496J9 727 aa22.57■■□□□ 1.2
TOP1MT-206ENST00000518951 ZNF697Q5TEC3 545 aa22.57■■□□□ 1.2
TOP1MT-206ENST00000518951 SPOPLQ6IQ16 392 aa22.57■■□□□ 1.2
TOP1MT-206ENST00000518951 VPS52Q8N1B4 723 aa22.57■■□□□ 1.2
TOP1MT-206ENST00000518951 NDST4Q9H3R1 872 aa22.57■■□□□ 1.2
TOP1MT-206ENST00000518951 RAB20Q9NX57 234 aa22.57■■□□□ 1.2
TOP1MT-206ENST00000518951 LZTS1Q9Y250 596 aa22.57■■□□□ 1.2
TOP1MT-206ENST00000518951 R3HCC1Q9Y3T6 440 aaKnown RBP22.57■■□□□ 1.2
TOP1MT-206ENST00000518951 LRRC10BA6NIK2 292 aa22.56■■□□□ 1.2
TOP1MT-206ENST00000518951 M0QZQ0 153 aa22.56■■□□□ 1.2
TOP1MT-206ENST00000518951 CSPG5O95196 566 aa22.56■■□□□ 1.2
TOP1MT-206ENST00000518951 STAU1O95793 577 aaKnown RBP22.56■■□□□ 1.2
TOP1MT-206ENST00000518951 SOD2P04179 222 aa22.56■■□□□ 1.2
TOP1MT-206ENST00000518951 TKTP29401 623 aaKnown RBP22.56■■□□□ 1.2
TOP1MT-206ENST00000518951 COPB1P53618 953 aaKnown RBP22.56■■□□□ 1.2
TOP1MT-206ENST00000518951 MYO1EQ12965 1108 aa22.56■■□□□ 1.2
TOP1MT-206ENST00000518951 DSTYKQ6XUX3 929 aa22.56■■□□□ 1.2
TOP1MT-206ENST00000518951 Q7L0L9 218 aa22.56■■□□□ 1.2
TOP1MT-206ENST00000518951 LMO3Q8TAP4 145 aa22.56■■□□□ 1.2
TOP1MT-206ENST00000518951 AUTS2Q8WXX7 1259 aa22.56■■□□□ 1.2
TOP1MT-206ENST00000518951 HERC2P3Q9BVR0 1158 aa22.56■■□□□ 1.2
TOP1MT-206ENST00000518951 ZBP1Q9H171 429 aa22.56■■□□□ 1.2
TOP1MT-206ENST00000518951 VRTNQ9H8Y1 702 aa22.56■■□□□ 1.2
TOP1MT-206ENST00000518951 APOBEC3GQ9HC16 384 aaKnown RBP22.56■■□□□ 1.2
TOP1MT-206ENST00000518951 CHST7Q9NS84 486 aa22.56■■□□□ 1.2
TOP1MT-206ENST00000518951 TIMM13Q9Y5L4 95 aaPredicted RBP22.56■■□□□ 1.2
TOP1MT-206ENST00000518951 TRAPPC3O43617 180 aa22.55■■□□□ 1.2
TOP1MT-206ENST00000518951 N4BP1O75113 896 aaKnown RBP22.55■■□□□ 1.2
TOP1MT-206ENST00000518951 ASS1P00966 412 aaKnown RBP22.55■■□□□ 1.2
TOP1MT-206ENST00000518951 FGFR3P22607 806 aa22.55■■□□□ 1.2
TOP1MT-206ENST00000518951 ATICP31939 592 aa22.55■■□□□ 1.2
TOP1MT-206ENST00000518951 IRS1P35568 1242 aa22.55■■□□□ 1.2
TOP1MT-206ENST00000518951 UBE3AQ05086 875 aa22.55■■□□□ 1.2
TOP1MT-206ENST00000518951 SGSM1Q2NKQ1 1148 aa22.55■■□□□ 1.2
TOP1MT-206ENST00000518951 RTP2Q5QGT7 225 aa22.55■■□□□ 1.2
TOP1MT-206ENST00000518951 RBSNQ9H1K0 784 aa22.55■■□□□ 1.2
TOP1MT-206ENST00000518951 GDAP2Q9NXN4 497 aa22.55■■□□□ 1.2
TOP1MT-206ENST00000518951 PUF60Q9UHX1 559 aaKnown RBP22.55■■□□□ 1.2
TOP1MT-206ENST00000518951 POLIQ9UNA4 740 aa22.55■■□□□ 1.2
TOP1MT-206ENST00000518951 PCDHGC5Q9Y5F6 944 aa22.55■■□□□ 1.2
TOP1MT-206ENST00000518951 SNX9Q9Y5X1 595 aa22.55■■□□□ 1.2
TOP1MT-206ENST00000518951 GOLGA6L19H0YKK7 550 aa22.54■■□□□ 1.2
TOP1MT-206ENST00000518951 CYB561D2O14569 222 aa22.54■■□□□ 1.2
TOP1MT-206ENST00000518951 P4HA2O15460 535 aa22.54■■□□□ 1.2
TOP1MT-206ENST00000518951 ELAVL2Q12926 359 aaKnown RBP22.54■■□□□ 1.2
TOP1MT-206ENST00000518951 ZNF699Q32M78 642 aa22.54■■□□□ 1.2
TOP1MT-206ENST00000518951 USP41Q3LFD5 358 aa22.54■■□□□ 1.2
TOP1MT-206ENST00000518951 WDR72Q3MJ13 1102 aa22.54■■□□□ 1.2
TOP1MT-206ENST00000518951 GPR153Q6NV75 609 aa22.54■■□□□ 1.2
TOP1MT-206ENST00000518951 CEP57Q86XR8 500 aa22.54■■□□□ 1.2
TOP1MT-206ENST00000518951 CRACR2AQ9BSW2 395 aa22.54■■□□□ 1.2
TOP1MT-206ENST00000518951 PCDHB8Q9UN66 801 aa22.54■■□□□ 1.2
TOP1MT-206ENST00000518951 CTSAP10619 480 aa22.54■■□□□ 1.2
TOP1MT-206ENST00000518951 PAX3P23760 479 aa22.54■■□□□ 1.2
TOP1MT-206ENST00000518951 KIAA0319Q5VV43 1072 aa22.54■■□□□ 1.2
TOP1MT-206ENST00000518951 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.54■■□□□ 1.2
TOP1MT-206ENST00000518951 EHBP1Q8NDI1 1231 aa22.54■■□□□ 1.2
TOP1MT-206ENST00000518951 TATDN2Q93075 761 aa22.54■■□□□ 1.2
TOP1MT-206ENST00000518951 TTPALQ9BTX7 342 aa22.54■■□□□ 1.2
TOP1MT-206ENST00000518951 TLR9Q9NR96 1032 aa22.54■■□□□ 1.2
TOP1MT-206ENST00000518951 NXF1Q9UBU9 619 aaKnown RBP22.54■■□□□ 1.2
TOP1MT-206ENST00000518951 L1RE1Q9UN81 338 aa22.54■■□□□ 1.2
TOP1MT-206ENST00000518951 PES1O00541 588 aaKnown RBP22.53■■□□□ 1.2
TOP1MT-206ENST00000518951 FSCN2O14926 492 aa22.53■■□□□ 1.2
TOP1MT-206ENST00000518951 LILRB3O75022 631 aa22.53■■□□□ 1.2
TOP1MT-206ENST00000518951 NOP14P78316 857 aaKnown RBP22.53■■□□□ 1.2
TOP1MT-206ENST00000518951 DSG1Q02413 1049 aa22.53■■□□□ 1.2
TOP1MT-206ENST00000518951 SOWAHAQ2M3V2 549 aa22.53■■□□□ 1.2
TOP1MT-206ENST00000518951 ZNF667Q5HYK9 610 aa22.53■■□□□ 1.2
TOP1MT-206ENST00000518951 PRSS55Q6UWB4 352 aaPredicted RBP22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms