RNA–Protein interactions for RNA: ENST00000518931.1

SQLE-203, Transcript of squalene epoxidase, humanhuman

TSL 4

Gene SQLE, Length 554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-203ENST00000518931 KAT5Q92993 513 aa6.89□□□□□ -1.31
SQLE-203ENST00000518931 MRI1Q9BV20 369 aa6.89□□□□□ -1.31
SQLE-203ENST00000518931 SEZ6LQ9BYH1 1024 aa6.89□□□□□ -1.31
SQLE-203ENST00000518931 PLCB1Q9NQ66 1216 aa6.89□□□□□ -1.31
SQLE-203ENST00000518931 ZNF180Q9UJW8 692 aa6.89□□□□□ -1.31
SQLE-203ENST00000518931 PNPLA7Q6ZV29 1317 aa6.88□□□□□ -1.31
SQLE-203ENST00000518931 PJA2O43164 708 aa6.88□□□□□ -1.31
SQLE-203ENST00000518931 SNRPA1P09661 255 aaKnown RBP6.88□□□□□ -1.31
SQLE-203ENST00000518931 PF4V1P10720 104 aa6.88□□□□□ -1.31
SQLE-203ENST00000518931 PDCP20941 246 aa6.88□□□□□ -1.31
SQLE-203ENST00000518931 ALDH1A3P47895 512 aa6.88□□□□□ -1.31
SQLE-203ENST00000518931 RAP2BP61225 183 aa6.88□□□□□ -1.31
SQLE-203ENST00000518931 PSMC1P62191 440 aaKnown RBP6.88□□□□□ -1.31
SQLE-203ENST00000518931 RRP12Q5JTH9 1297 aaKnown RBP6.88□□□□□ -1.31
SQLE-203ENST00000518931 NAIF1Q69YI7 327 aaPredicted RBP6.88□□□□□ -1.31
SQLE-203ENST00000518931 HTR3DQ70Z44 454 aa6.88□□□□□ -1.31
SQLE-203ENST00000518931 CLASRPQ8N2M8 674 aaKnown RBP6.88□□□□□ -1.31
SQLE-203ENST00000518931 RNF169Q8NCN4 708 aa6.88□□□□□ -1.31
SQLE-203ENST00000518931 ZFP28Q8NHY6 868 aa6.88□□□□□ -1.31
SQLE-203ENST00000518931 CASKIN2Q8WXE0 1202 aa6.88□□□□□ -1.31
SQLE-203ENST00000518931 TMX3Q96JJ7 454 aa6.88□□□□□ -1.31
SQLE-203ENST00000518931 CDHR1Q96JP9 859 aa6.88□□□□□ -1.31
SQLE-203ENST00000518931 MYOCQ99972 504 aa6.88□□□□□ -1.31
SQLE-203ENST00000518931 RTFDC1Q9BY42 306 aaPredicted RBP6.88□□□□□ -1.31
SQLE-203ENST00000518931 AURKAIP1Q9NWT8 199 aaPredicted RBP6.88□□□□□ -1.31
SQLE-203ENST00000518931 RUVBL1Q9Y265 456 aaKnown RBP6.88□□□□□ -1.31
SQLE-203ENST00000518931 PCDHB1Q9Y5F3 818 aa6.88□□□□□ -1.31
SQLE-203ENST00000518931 MORC2Q9Y6X9 1032 aaPredicted RBP6.88□□□□□ -1.31
SQLE-203ENST00000518931 VSTM5A8MXK1 200 aa6.87□□□□□ -1.31
SQLE-203ENST00000518931 TEX33O43247 280 aa6.87□□□□□ -1.31
SQLE-203ENST00000518931 POU2F2P09086 479 aa6.87□□□□□ -1.31
SQLE-203ENST00000518931 SLC5A1P13866 664 aa6.87□□□□□ -1.31
SQLE-203ENST00000518931 ATP5JP18859 108 aa6.87□□□□□ -1.31
SQLE-203ENST00000518931 ATP8B2P98198 1209 aa6.87□□□□□ -1.31
SQLE-203ENST00000518931 CDC42EP1Q00587 391 aa6.87□□□□□ -1.31
SQLE-203ENST00000518931 CHAF1AQ13111 956 aaPredicted RBP6.87□□□□□ -1.31
SQLE-203ENST00000518931 TARDBPQ13148 414 aaKnown RBP eCLIP6.87□□□□□ -1.31
SQLE-203ENST00000518931 TBX2Q13207 712 aaPredicted RBP6.87□□□□□ -1.31
SQLE-203ENST00000518931 MTM1Q13496 603 aa6.87□□□□□ -1.31
SQLE-203ENST00000518931 DACT2Q5SW24 774 aa6.87□□□□□ -1.31
SQLE-203ENST00000518931 ATXN7L2Q5T6C5 722 aaPredicted RBP6.87□□□□□ -1.31
SQLE-203ENST00000518931 MZT2BQ6NZ67 158 aa6.87□□□□□ -1.31
SQLE-203ENST00000518931 MAATS1Q7Z4T9 603 aa6.87□□□□□ -1.31
SQLE-203ENST00000518931 ATRIPQ8WXE1 791 aa6.87□□□□□ -1.31
SQLE-203ENST00000518931 JPH3Q8WXH2 748 aaPredicted RBP6.87□□□□□ -1.31
SQLE-203ENST00000518931 CCDC47Q96A33 483 aaKnown RBP6.87□□□□□ -1.31
SQLE-203ENST00000518931 NBNO60934 754 aa6.86□□□□□ -1.31
SQLE-203ENST00000518931 VCAM1P19320 739 aa6.86□□□□□ -1.31
SQLE-203ENST00000518931 PTTG1IPP53801 180 aa6.86□□□□□ -1.31
SQLE-203ENST00000518931 WASHC5Q12768 1159 aa6.86□□□□□ -1.31
SQLE-203ENST00000518931 KIF22Q14807 665 aa6.86□□□□□ -1.31
SQLE-203ENST00000518931 ZXDCQ2QGD7 858 aaPredicted RBP6.86□□□□□ -1.31
SQLE-203ENST00000518931 SPECC1Q5M775 1068 aa6.86□□□□□ -1.31
SQLE-203ENST00000518931 OTUD7BQ6GQQ9 843 aa6.86□□□□□ -1.31
SQLE-203ENST00000518931 DRICH1Q6PGQ1 229 aaPredicted RBP6.86□□□□□ -1.31
SQLE-203ENST00000518931 RNF207Q6ZRF8 634 aa6.86□□□□□ -1.31
SQLE-203ENST00000518931 LCA5Q86VQ0 697 aa6.86□□□□□ -1.31
SQLE-203ENST00000518931 SYT12Q8IV01 421 aa6.86□□□□□ -1.31
SQLE-203ENST00000518931 OR10H5Q8NGA6 315 aa6.86□□□□□ -1.31
SQLE-203ENST00000518931 GJA10Q969M2 543 aa6.86□□□□□ -1.31
SQLE-203ENST00000518931 CLPTM1LQ96KA5 538 aa6.86□□□□□ -1.31
SQLE-203ENST00000518931 TBATAQ96M53 351 aa6.86□□□□□ -1.31
SQLE-203ENST00000518931 PLEKHG4BQ96PX9 1271 aa6.86□□□□□ -1.31
SQLE-203ENST00000518931 NDC1Q9BTX1 674 aa6.86□□□□□ -1.31
SQLE-203ENST00000518931 RHOBTB2Q9BYZ6 727 aa6.86□□□□□ -1.31
SQLE-203ENST00000518931 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.86□□□□□ -1.31
SQLE-203ENST00000518931 SLC23A1Q9UHI7 598 aa6.86□□□□□ -1.31
SQLE-203ENST00000518931 SORCS3Q9UPU3 1222 aa6.86□□□□□ -1.31
SQLE-203ENST00000518931 DGKBQ9Y6T7 804 aa6.86□□□□□ -1.31
SQLE-203ENST00000518931 LEFTY2O00292 366 aa6.85□□□□□ -1.31
SQLE-203ENST00000518931 SGTAO43765 313 aa6.85□□□□□ -1.31
SQLE-203ENST00000518931 PIP5K1CO60331 668 aa6.85□□□□□ -1.31
SQLE-203ENST00000518931 SNX2O60749 519 aa6.85□□□□□ -1.31
SQLE-203ENST00000518931 AMHP03971 560 aa6.85□□□□□ -1.31
SQLE-203ENST00000518931 RPLP2P05387 115 aaKnown RBP6.85□□□□□ -1.31
SQLE-203ENST00000518931 AKAP5P24588 427 aa6.85□□□□□ -1.31
SQLE-203ENST00000518931 MGAT1P26572 445 aa6.85□□□□□ -1.31
SQLE-203ENST00000518931 ZNF280AP59817 542 aaPredicted RBP6.85□□□□□ -1.31
SQLE-203ENST00000518931 CTXN1P60606 82 aa6.85□□□□□ -1.31
SQLE-203ENST00000518931 DSC2Q02487 901 aa6.85□□□□□ -1.31
SQLE-203ENST00000518931 PUM1Q14671 1186 aaKnown RBP eCLIP6.85□□□□□ -1.31
SQLE-203ENST00000518931 SAFBQ15424 915 aaKnown RBP eCLIP6.85□□□□□ -1.31
SQLE-203ENST00000518931 ZNF529Q6P280 563 aa6.85□□□□□ -1.31
SQLE-203ENST00000518931 USP45Q70EL2 814 aa6.85□□□□□ -1.31
SQLE-203ENST00000518931 RSRC2Q7L4I2 434 aaKnown RBP6.85□□□□□ -1.31
SQLE-203ENST00000518931 CATIPQ7Z7H3 387 aa6.85□□□□□ -1.31
SQLE-203ENST00000518931 PRR18Q8N4B5 295 aa6.85□□□□□ -1.31
SQLE-203ENST00000518931 PHACTR3Q96KR7 559 aa6.85□□□□□ -1.31
SQLE-203ENST00000518931 PARPBPQ9NWS1 579 aa6.85□□□□□ -1.31
SQLE-203ENST00000518931 EIF2B4Q9UI10 523 aaKnown RBP6.85□□□□□ -1.31
SQLE-203ENST00000518931 MYRFQ9Y2G1 1151 aa6.85□□□□□ -1.31
SQLE-203ENST00000518931 SYNRGQ9UMZ2 1314 aa6.84□□□□□ -1.31
SQLE-203ENST00000518931 DRGXA6NNA5 263 aa6.84□□□□□ -1.31
SQLE-203ENST00000518931 FAM20BO75063 409 aa6.84□□□□□ -1.31
SQLE-203ENST00000518931 RHOBTB3O94955 611 aa6.84□□□□□ -1.31
SQLE-203ENST00000518931 POMCP01189 267 aa6.84□□□□□ -1.31
SQLE-203ENST00000518931 C1SP09871 688 aa6.84□□□□□ -1.31
SQLE-203ENST00000518931 APOBEC3AP31941 199 aaPredicted RBP6.84□□□□□ -1.31
SQLE-203ENST00000518931 DGCR2P98153 550 aa6.84□□□□□ -1.31
SQLE-203ENST00000518931 NHLH2Q02577 135 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms