RNA–Protein interactions for RNA: ENST00000518407.1

IGHV3-6-201, Transcript of immunoglobulin heavy variable 3-6 (pseudogene), humanhuman

BASIC

Gene IGHV3-6, Length 347 nt, Biotype IG V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-6-201ENST00000518407 PTPN14Q15678 1187 aa13.53□□□□□ -0.24
IGHV3-6-201ENST00000518407 TPD52L1Q16890 204 aaPredicted RBP13.53□□□□□ -0.24
IGHV3-6-201ENST00000518407 SV2CQ496J9 727 aa13.53□□□□□ -0.24
IGHV3-6-201ENST00000518407 RTP2Q5QGT7 225 aa13.53□□□□□ -0.24
IGHV3-6-201ENST00000518407 KIAA0319Q5VV43 1072 aa13.53□□□□□ -0.24
IGHV3-6-201ENST00000518407 TCERG1LQ5VWI1 586 aa13.53□□□□□ -0.24
IGHV3-6-201ENST00000518407 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.53□□□□□ -0.24
IGHV3-6-201ENST00000518407 MYLIPQ8WY64 445 aa13.53□□□□□ -0.24
IGHV3-6-201ENST00000518407 B3GALT6Q96L58 329 aa13.53□□□□□ -0.24
IGHV3-6-201ENST00000518407 CDX2Q99626 313 aaPredicted RBP13.53□□□□□ -0.24
IGHV3-6-201ENST00000518407 VRTNQ9H8Y1 702 aa13.53□□□□□ -0.24
IGHV3-6-201ENST00000518407 PCDHB8Q9UN66 801 aa13.53□□□□□ -0.24
IGHV3-6-201ENST00000518407 COQ4Q9Y3A0 265 aa13.53□□□□□ -0.24
IGHV3-6-201ENST00000518407 NUB1Q9Y5A7 615 aa13.53□□□□□ -0.24
IGHV3-6-201ENST00000518407 IRAK3Q9Y616 596 aa13.53□□□□□ -0.24
IGHV3-6-201ENST00000518407 MTCH2Q9Y6C9 303 aa13.53□□□□□ -0.24
IGHV3-6-201ENST00000518407 GREB1Q4ZG55 1949 aa13.52□□□□□ -0.24
IGHV3-6-201ENST00000518407 TULP1O00294 542 aaPredicted RBP13.52□□□□□ -0.25
IGHV3-6-201ENST00000518407 SYN3O14994 580 aa13.52□□□□□ -0.25
IGHV3-6-201ENST00000518407 PMM2O15305 246 aa13.52□□□□□ -0.25
IGHV3-6-201ENST00000518407 STX10O60499 249 aa13.52□□□□□ -0.25
IGHV3-6-201ENST00000518407 HLA-DRAP01903 254 aa13.52□□□□□ -0.25
IGHV3-6-201ENST00000518407 KRT19P08727 400 aa13.52□□□□□ -0.25
IGHV3-6-201ENST00000518407 ZNF18P17022 549 aa13.52□□□□□ -0.25
IGHV3-6-201ENST00000518407 FMO5P49326 533 aa13.52□□□□□ -0.25
IGHV3-6-201ENST00000518407 GLUD2P49448 558 aa13.52□□□□□ -0.25
IGHV3-6-201ENST00000518407 ZNF165P49910 485 aa13.52□□□□□ -0.25
IGHV3-6-201ENST00000518407 ZNF445P59923 1031 aa13.52□□□□□ -0.25
IGHV3-6-201ENST00000518407 MYL6P60660 151 aa13.52□□□□□ -0.25
IGHV3-6-201ENST00000518407 BIRC3Q13489 604 aa13.52□□□□□ -0.25
IGHV3-6-201ENST00000518407 NCOA4Q13772 614 aa13.52□□□□□ -0.25
IGHV3-6-201ENST00000518407 USP41Q3LFD5 358 aa13.52□□□□□ -0.25
IGHV3-6-201ENST00000518407 HSP90AA4PQ58FG1 418 aa13.52□□□□□ -0.25
IGHV3-6-201ENST00000518407 FAM171A1Q5VUB5 890 aa13.52□□□□□ -0.25
IGHV3-6-201ENST00000518407 PLPP4Q5VZY2 271 aa13.52□□□□□ -0.25
IGHV3-6-201ENST00000518407 KRT39Q6A163 491 aa13.52□□□□□ -0.25
IGHV3-6-201ENST00000518407 LRSAM1Q6UWE0 723 aa13.52□□□□□ -0.25
IGHV3-6-201ENST00000518407 LIMS2Q7Z4I7 341 aa13.52□□□□□ -0.25
IGHV3-6-201ENST00000518407 FAM114A1Q8IWE2 563 aa13.52□□□□□ -0.25
IGHV3-6-201ENST00000518407 GPR65Q8IYL9 337 aa13.52□□□□□ -0.25
IGHV3-6-201ENST00000518407 TAS1R2Q8TE23 839 aa13.52□□□□□ -0.25
IGHV3-6-201ENST00000518407 AUTS2Q8WXX7 1259 aa13.52□□□□□ -0.25
IGHV3-6-201ENST00000518407 SEMA4DQ92854 862 aa13.52□□□□□ -0.25
IGHV3-6-201ENST00000518407 SENP8Q96LD8 212 aa13.52□□□□□ -0.25
IGHV3-6-201ENST00000518407 TCF25Q9BQ70 676 aa13.52□□□□□ -0.25
IGHV3-6-201ENST00000518407 NAT10Q9H0A0 1025 aaKnown RBP13.52□□□□□ -0.25
IGHV3-6-201ENST00000518407 MMRN2Q9H8L6 949 aa13.52□□□□□ -0.25
IGHV3-6-201ENST00000518407 FANCLQ9NW38 375 aa13.52□□□□□ -0.25
IGHV3-6-201ENST00000518407 GDAP2Q9NXN4 497 aa13.52□□□□□ -0.25
IGHV3-6-201ENST00000518407 PUF60Q9UHX1 559 aaKnown RBP13.52□□□□□ -0.25
IGHV3-6-201ENST00000518407 PATJQ8NI35 1801 aa13.52□□□□□ -0.25
IGHV3-6-201ENST00000518407 PRUNE2Q8WUY3 3088 aa13.51□□□□□ -0.25
IGHV3-6-201ENST00000518407 C2orf71A6NGG8 1288 aa13.51□□□□□ -0.25
IGHV3-6-201ENST00000518407 HIDE1A8MVS5 230 aa13.51□□□□□ -0.25
IGHV3-6-201ENST00000518407 KPNA7A9QM74 516 aa13.51□□□□□ -0.25
IGHV3-6-201ENST00000518407 KCNJ18B7U540 433 aa13.51□□□□□ -0.25
IGHV3-6-201ENST00000518407 TRAPPC3O43617 180 aa13.51□□□□□ -0.25
IGHV3-6-201ENST00000518407 LRRN2O75325 713 aa13.51□□□□□ -0.25
IGHV3-6-201ENST00000518407 CSPG5O95196 566 aa13.51□□□□□ -0.25
IGHV3-6-201ENST00000518407 ASS1P00966 412 aaKnown RBP13.51□□□□□ -0.25
IGHV3-6-201ENST00000518407 CYP11A1P05108 521 aa13.51□□□□□ -0.25
IGHV3-6-201ENST00000518407 URODP06132 367 aa13.51□□□□□ -0.25
IGHV3-6-201ENST00000518407 TYMPP19971 482 aa13.51□□□□□ -0.25
IGHV3-6-201ENST00000518407 ATICP31939 592 aa13.51□□□□□ -0.25
IGHV3-6-201ENST00000518407 PIK3CAP42336 1068 aa13.51□□□□□ -0.25
IGHV3-6-201ENST00000518407 KCNH2Q12809 1159 aa13.51□□□□□ -0.25
IGHV3-6-201ENST00000518407 MRPL58Q14197 206 aaKnown RBP13.51□□□□□ -0.25
IGHV3-6-201ENST00000518407 KCNJ12Q14500 433 aa13.51□□□□□ -0.25
IGHV3-6-201ENST00000518407 SMC1AQ14683 1233 aaKnown RBP13.51□□□□□ -0.25
IGHV3-6-201ENST00000518407 PTPROQ16827 1216 aa13.51□□□□□ -0.25
IGHV3-6-201ENST00000518407 TCP11X2Q5H9J9 407 aa13.51□□□□□ -0.25
IGHV3-6-201ENST00000518407 MIIPQ5JXC2 388 aa13.51□□□□□ -0.25
IGHV3-6-201ENST00000518407 PDE12Q6L8Q7 609 aaKnown RBP13.51□□□□□ -0.25
IGHV3-6-201ENST00000518407 ADGRD2Q7Z7M1 963 aa13.51□□□□□ -0.25
IGHV3-6-201ENST00000518407 PIK3R5Q8WYR1 880 aa13.51□□□□□ -0.25
IGHV3-6-201ENST00000518407 HPDLQ96IR7 371 aa13.51□□□□□ -0.25
IGHV3-6-201ENST00000518407 GAS2L1Q99501 681 aaPredicted RBP13.51□□□□□ -0.25
IGHV3-6-201ENST00000518407 TTPALQ9BTX7 342 aa13.51□□□□□ -0.25
IGHV3-6-201ENST00000518407 CBX8Q9HC52 389 aa13.51□□□□□ -0.25
IGHV3-6-201ENST00000518407 NGRNQ9NPE2 291 aaKnown RBP13.51□□□□□ -0.25
IGHV3-6-201ENST00000518407 ENTPD7Q9NQZ7 604 aa13.51□□□□□ -0.25
IGHV3-6-201ENST00000518407 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.51□□□□□ -0.25
IGHV3-6-201ENST00000518407 BRWD1Q9NSI6 2320 aa13.51□□□□□ -0.25
IGHV3-6-201ENST00000518407 COL6A3P12111 3177 aa13.51□□□□□ -0.25
IGHV3-6-201ENST00000518407 DENND4AQ7Z401 1863 aa13.5□□□□□ -0.25
IGHV3-6-201ENST00000518407 TBC1D4O60343 1298 aa13.5□□□□□ -0.25
IGHV3-6-201ENST00000518407 N4BP1O75113 896 aaKnown RBP13.5□□□□□ -0.25
IGHV3-6-201ENST00000518407 PHACTR2O75167 634 aa13.5□□□□□ -0.25
IGHV3-6-201ENST00000518407 AFPP02771 609 aaKnown RBP13.5□□□□□ -0.25
IGHV3-6-201ENST00000518407 ODC1P11926 461 aa13.5□□□□□ -0.25
IGHV3-6-201ENST00000518407 EEF1GP26641 437 aaKnown RBP13.5□□□□□ -0.25
IGHV3-6-201ENST00000518407 MTIF2P46199 727 aaKnown RBP13.5□□□□□ -0.25
IGHV3-6-201ENST00000518407 MYL7Q01449 175 aa13.5□□□□□ -0.25
IGHV3-6-201ENST00000518407 MYO1EQ12965 1108 aa13.5□□□□□ -0.25
IGHV3-6-201ENST00000518407 TRPC3Q13507 836 aa13.5□□□□□ -0.25
IGHV3-6-201ENST00000518407 MAN2A1Q16706 1144 aa13.5□□□□□ -0.25
IGHV3-6-201ENST00000518407 VARS2Q5ST30 1063 aaKnown RBP13.5□□□□□ -0.25
IGHV3-6-201ENST00000518407 PRSS55Q6UWB4 352 aaPredicted RBP13.5□□□□□ -0.25
IGHV3-6-201ENST00000518407 DSTYKQ6XUX3 929 aa13.5□□□□□ -0.25
IGHV3-6-201ENST00000518407 APTXQ7Z2E3 356 aaKnown RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms