RNA–Protein interactions for RNA: ENST00000517862.1

CPNE3-204, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 654 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-204ENST00000517862 OSGEPQ9NPF4 335 aa3.97□□□□□ -1.77
CPNE3-204ENST00000517862 BTBD7Q9P203 1132 aa3.97□□□□□ -1.77
CPNE3-204ENST00000517862 SUCOQ9UBS9 1254 aaKnown RBP3.97□□□□□ -1.77
CPNE3-204ENST00000517862 ZC3H7BQ9UGR2 993 aaKnown RBP3.97□□□□□ -1.77
CPNE3-204ENST00000517862 MCM8Q9UJA3 840 aa3.97□□□□□ -1.77
CPNE3-204ENST00000517862 ADAM30Q9UKF2 790 aa3.97□□□□□ -1.77
CPNE3-204ENST00000517862 PPP1R9AQ9ULJ8 1098 aa3.97□□□□□ -1.77
CPNE3-204ENST00000517862 PCDHGA5Q9Y5G8 931 aa3.97□□□□□ -1.77
CPNE3-204ENST00000517862 ACANP16112 2415 aa3.97□□□□□ -1.77
CPNE3-204ENST00000517862 MYH13Q9UKX3 1938 aa3.96□□□□□ -1.78
CPNE3-204ENST00000517862 ANKRD34BA5PLL1 514 aa3.96□□□□□ -1.78
CPNE3-204ENST00000517862 WIPF3A6NGB9 483 aa3.96□□□□□ -1.78
CPNE3-204ENST00000517862 GNAT3A8MTJ3 354 aa3.96□□□□□ -1.78
CPNE3-204ENST00000517862 CDX4O14627 284 aaPredicted RBP3.96□□□□□ -1.78
CPNE3-204ENST00000517862 PLD2O14939 933 aa3.96□□□□□ -1.78
CPNE3-204ENST00000517862 TMPRSS2O15393 492 aa3.96□□□□□ -1.78
CPNE3-204ENST00000517862 NCAM2O15394 837 aa3.96□□□□□ -1.78
CPNE3-204ENST00000517862 TPD52L2O43399 206 aaKnown RBP3.96□□□□□ -1.78
CPNE3-204ENST00000517862 ZEB2O60315 1214 aa3.96□□□□□ -1.78
CPNE3-204ENST00000517862 NBNO60934 754 aa3.96□□□□□ -1.78
CPNE3-204ENST00000517862 ALDH1L1O75891 902 aa3.96□□□□□ -1.78
CPNE3-204ENST00000517862 DNAJC8O75937 253 aaPredicted RBP3.96□□□□□ -1.78
CPNE3-204ENST00000517862 NADKO95544 446 aaPredicted RBP3.96□□□□□ -1.78
CPNE3-204ENST00000517862 CXCL10P02778 98 aa3.96□□□□□ -1.78
CPNE3-204ENST00000517862 LINC00271P0C7V0 271 aa3.96□□□□□ -1.78
CPNE3-204ENST00000517862 INSRRP14616 1297 aa3.96□□□□□ -1.78
CPNE3-204ENST00000517862 BMP7P18075 431 aa3.96□□□□□ -1.78
CPNE3-204ENST00000517862 GBP1P32455 592 aa3.96□□□□□ -1.78
CPNE3-204ENST00000517862 NTF4P34130 210 aa3.96□□□□□ -1.78
CPNE3-204ENST00000517862 RPS9P46781 194 aaKnown RBP3.96□□□□□ -1.78
CPNE3-204ENST00000517862 PREPP48147 710 aa3.96□□□□□ -1.78
CPNE3-204ENST00000517862 GUCY2FP51841 1108 aa3.96□□□□□ -1.78
CPNE3-204ENST00000517862 PMS1P54277 932 aaKnown RBP3.96□□□□□ -1.78
CPNE3-204ENST00000517862 FAM193AP78312 1265 aa3.96□□□□□ -1.78
CPNE3-204ENST00000517862 STRN3Q13033 797 aa3.96□□□□□ -1.78
CPNE3-204ENST00000517862 SNW1Q13573 536 aaKnown RBP3.96□□□□□ -1.78
CPNE3-204ENST00000517862 HSP90AA2PQ14568 343 aaPredicted RBP3.96□□□□□ -1.78
CPNE3-204ENST00000517862 ZNF460Q14592 562 aa3.96□□□□□ -1.78
CPNE3-204ENST00000517862 TTF1Q15361 905 aaPredicted RBP3.96□□□□□ -1.78
CPNE3-204ENST00000517862 LONRF2Q1L5Z9 754 aa3.96□□□□□ -1.78
CPNE3-204ENST00000517862 UBXN11Q5T124 520 aa3.96□□□□□ -1.78
CPNE3-204ENST00000517862 APOBEC3HQ6NTF7 200 aaKnown RBP3.96□□□□□ -1.78
CPNE3-204ENST00000517862 KIAA1211Q6ZU35 1233 aa3.96□□□□□ -1.78
CPNE3-204ENST00000517862 FGD2Q7Z6J4 655 aa3.96□□□□□ -1.78
CPNE3-204ENST00000517862 CCDC144CPQ8IYA2 1237 aa3.96□□□□□ -1.78
CPNE3-204ENST00000517862 AFAP1L2Q8N4X5 818 aa3.96□□□□□ -1.78
CPNE3-204ENST00000517862 SPATA20Q8TB22 786 aa3.96□□□□□ -1.78
CPNE3-204ENST00000517862 AFAP1L1Q8TED9 768 aa3.96□□□□□ -1.78
CPNE3-204ENST00000517862 LEO1Q8WVC0 666 aaPredicted RBP3.96□□□□□ -1.78
CPNE3-204ENST00000517862 CLDN23Q96B33 292 aa3.96□□□□□ -1.78
CPNE3-204ENST00000517862 CDC5LQ99459 802 aaKnown RBP3.96□□□□□ -1.78
CPNE3-204ENST00000517862 GPR20Q99678 358 aa3.96□□□□□ -1.78
CPNE3-204ENST00000517862 MOV10L1Q9BXT6 1211 aaKnown RBP3.96□□□□□ -1.78
CPNE3-204ENST00000517862 RAD18Q9NS91 495 aa3.96□□□□□ -1.78
CPNE3-204ENST00000517862 TCP11L1Q9NUJ3 509 aa3.96□□□□□ -1.78
CPNE3-204ENST00000517862 RTEL1Q9NZ71 1219 aa3.96□□□□□ -1.78
CPNE3-204ENST00000517862 NDOR1Q9UHB4 597 aa3.96□□□□□ -1.78
CPNE3-204ENST00000517862 SFMBT1Q9UHJ3 866 aa3.96□□□□□ -1.78
CPNE3-204ENST00000517862 TCEAL9Q9UHQ7 104 aa3.96□□□□□ -1.78
CPNE3-204ENST00000517862 AP4E1Q9UPM8 1137 aa3.96□□□□□ -1.78
CPNE3-204ENST00000517862 PLXNA4Q9HCM2 1894 aa3.96□□□□□ -1.78
CPNE3-204ENST00000517862 MROH5Q6ZUA9 1318 aa3.95□□□□□ -1.78
CPNE3-204ENST00000517862 DCHS2Q6V1P9 2916 aa3.95□□□□□ -1.78
CPNE3-204ENST00000517862 TCAF2A6NFQ2 919 aa3.95□□□□□ -1.78
CPNE3-204ENST00000517862 RGS13O14921 159 aa3.95□□□□□ -1.78
CPNE3-204ENST00000517862 KPNA6O60684 536 aa3.95□□□□□ -1.78
CPNE3-204ENST00000517862 CLEC3AO75596 197 aa3.95□□□□□ -1.78
CPNE3-204ENST00000517862 RFPL3O75679 317 aa3.95□□□□□ -1.78
CPNE3-204ENST00000517862 NEFMP07197 916 aa3.95□□□□□ -1.78
CPNE3-204ENST00000517862 PABPC1P11940 636 aaKnown RBP3.95□□□□□ -1.78
CPNE3-204ENST00000517862 FCER1AP12319 257 aa3.95□□□□□ -1.78
CPNE3-204ENST00000517862 CD72P21854 359 aa3.95□□□□□ -1.78
CPNE3-204ENST00000517862 YARSP54577 528 aaKnown RBP3.95□□□□□ -1.78
CPNE3-204ENST00000517862 ID3Q02535 119 aa3.95□□□□□ -1.78
CPNE3-204ENST00000517862 PCBP1Q15365 356 aaKnown RBP eCLIP3.95□□□□□ -1.78
CPNE3-204ENST00000517862 SF1Q15637 639 aaKnown RBP3.95□□□□□ -1.78
CPNE3-204ENST00000517862 SEPT7Q16181 437 aaKnown RBP3.95□□□□□ -1.78
CPNE3-204ENST00000517862 FNDC3BQ53EP0 1204 aaKnown RBP3.95□□□□□ -1.78
CPNE3-204ENST00000517862 RARS2Q5T160 578 aaKnown RBP3.95□□□□□ -1.78
CPNE3-204ENST00000517862 ARHGAP40Q5TG30 622 aa3.95□□□□□ -1.78
CPNE3-204ENST00000517862 PRAMEF13Q5VWM6 474 aa3.95□□□□□ -1.78
CPNE3-204ENST00000517862 WWC2Q6AWC2 1192 aa3.95□□□□□ -1.78
CPNE3-204ENST00000517862 KIAA1841Q6NSI8 718 aa3.95□□□□□ -1.78
CPNE3-204ENST00000517862 PKN3Q6P5Z2 889 aa3.95□□□□□ -1.78
CPNE3-204ENST00000517862 SLC4A10Q6U841 1118 aa3.95□□□□□ -1.78
CPNE3-204ENST00000517862 HHIPL2Q6UWX4 724 aa3.95□□□□□ -1.78
CPNE3-204ENST00000517862 LRRC8DQ7L1W4 858 aa3.95□□□□□ -1.78
CPNE3-204ENST00000517862 BRAPQ7Z569 592 aa3.95□□□□□ -1.78
CPNE3-204ENST00000517862 ADAT2Q7Z6V5 191 aaKnown RBP3.95□□□□□ -1.78
CPNE3-204ENST00000517862 LONP2Q86WA8 852 aa3.95□□□□□ -1.78
CPNE3-204ENST00000517862 TMC8Q8IU68 726 aa3.95□□□□□ -1.78
CPNE3-204ENST00000517862 MCATQ8IVS2 390 aaKnown RBP3.95□□□□□ -1.78
CPNE3-204ENST00000517862 EXOC8Q8IYI6 725 aa3.95□□□□□ -1.78
CPNE3-204ENST00000517862 SLFN12Q8IYM2 578 aa3.95□□□□□ -1.78
CPNE3-204ENST00000517862 ABRAQ8N0Z2 381 aa3.95□□□□□ -1.78
CPNE3-204ENST00000517862 SLC7A14Q8TBB6 771 aa3.95□□□□□ -1.78
CPNE3-204ENST00000517862 BTN2A2Q8WVV5 523 aa3.95□□□□□ -1.78
CPNE3-204ENST00000517862 BRF1Q92994 677 aa3.95□□□□□ -1.78
CPNE3-204ENST00000517862 P2RX5Q93086 422 aa3.95□□□□□ -1.78
CPNE3-204ENST00000517862 TOP1MTQ969P6 601 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms