RNA–Protein interactions for RNA: ENST00000517785.1

LINC00535-202, long intergenic non-protein coding RNA 535, humanhuman

TSL 3 BASIC

Gene LINC00535, Length 264 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-202ENST00000517785 MIOSQ9NXC5 875 aa6.33□□□□□ -1.4
LINC00535-202ENST00000517785 DNMT3BQ9UBC3 853 aaKnown RBP6.33□□□□□ -1.4
LINC00535-202ENST00000517785 STK39Q9UEW8 545 aa6.33□□□□□ -1.4
LINC00535-202ENST00000517785 CEP131Q9UPN4 1083 aa6.33□□□□□ -1.4
LINC00535-202ENST00000517785 MRPS23Q9Y3D9 190 aaKnown RBP6.33□□□□□ -1.4
LINC00535-202ENST00000517785 MAFBQ9Y5Q3 323 aaPredicted RBP6.33□□□□□ -1.4
LINC00535-202ENST00000517785 SHROOM3Q8TF72 1996 aa6.33□□□□□ -1.4
LINC00535-202ENST00000517785 GOLGA4Q13439 2230 aaKnown RBP6.33□□□□□ -1.4
LINC00535-202ENST00000517785 PI4KAP42356 2102 aa6.32□□□□□ -1.4
LINC00535-202ENST00000517785 KIF26AQ9ULI4 1882 aaPredicted RBP6.32□□□□□ -1.4
LINC00535-202ENST00000517785 THADAQ6YHU6 1953 aa6.32□□□□□ -1.4
LINC00535-202ENST00000517785 FAM86B1E9PN63 330 aa6.32□□□□□ -1.4
LINC00535-202ENST00000517785 DHX15O43143 795 aaKnown RBP6.32□□□□□ -1.4
LINC00535-202ENST00000517785 EXTL3O43909 919 aa6.32□□□□□ -1.4
LINC00535-202ENST00000517785 ZNF862O60290 1169 aa6.32□□□□□ -1.4
LINC00535-202ENST00000517785 ZNF623O75123 536 aa6.32□□□□□ -1.4
LINC00535-202ENST00000517785 XYLBO75191 536 aa6.32□□□□□ -1.4
LINC00535-202ENST00000517785 RPP40O75818 363 aaKnown RBP6.32□□□□□ -1.4
LINC00535-202ENST00000517785 EFEMP2O95967 443 aa6.32□□□□□ -1.4
LINC00535-202ENST00000517785 FAM86B2P0C5J1 330 aa6.32□□□□□ -1.4
LINC00535-202ENST00000517785 SDSP20132 328 aa6.32□□□□□ -1.4
LINC00535-202ENST00000517785 FCARP24071 287 aa6.32□□□□□ -1.4
LINC00535-202ENST00000517785 MLH1P40692 756 aa6.32□□□□□ -1.4
LINC00535-202ENST00000517785 GATA4P43694 442 aa6.32□□□□□ -1.4
LINC00535-202ENST00000517785 NT5C2P49902 561 aa6.32□□□□□ -1.4
LINC00535-202ENST00000517785 UGCGQ16739 394 aa6.32□□□□□ -1.4
LINC00535-202ENST00000517785 UAP1L1Q3KQV9 507 aa6.32□□□□□ -1.4
LINC00535-202ENST00000517785 USP41Q3LFD5 358 aa6.32□□□□□ -1.4
LINC00535-202ENST00000517785 MTERF2Q49AM1 385 aa6.32□□□□□ -1.4
LINC00535-202ENST00000517785 UBXN11Q5T124 520 aa6.32□□□□□ -1.4
LINC00535-202ENST00000517785 ANKRD45Q5TZF3 282 aa6.32□□□□□ -1.4
LINC00535-202ENST00000517785 LRRC69Q6ZNQ3 347 aa6.32□□□□□ -1.4
LINC00535-202ENST00000517785 CACNA2D4Q7Z3S7 1137 aa6.32□□□□□ -1.4
LINC00535-202ENST00000517785 WDR5BQ86VZ2 330 aa6.32□□□□□ -1.4
LINC00535-202ENST00000517785 CEP57Q86XR8 500 aa6.32□□□□□ -1.4
LINC00535-202ENST00000517785 RHPN2Q8IUC4 686 aa6.32□□□□□ -1.4
LINC00535-202ENST00000517785 SPEM1Q8N4L4 309 aa6.32□□□□□ -1.4
LINC00535-202ENST00000517785 SRBD1Q8N5C6 995 aaKnown RBP6.32□□□□□ -1.4
LINC00535-202ENST00000517785 CTCFLQ8NI51 663 aaPredicted RBP6.32□□□□□ -1.4
LINC00535-202ENST00000517785 HNRNPLLQ8WVV9 542 aaKnown RBP6.32□□□□□ -1.4
LINC00535-202ENST00000517785 DNASE1L2Q92874 299 aa6.32□□□□□ -1.4
LINC00535-202ENST00000517785 MBOAT7Q96N66 472 aa6.32□□□□□ -1.4
LINC00535-202ENST00000517785 GAD1Q99259 594 aa6.32□□□□□ -1.4
LINC00535-202ENST00000517785 MKNK1Q9BUB5 465 aa6.32□□□□□ -1.4
LINC00535-202ENST00000517785 TRAIPQ9BWF2 469 aa6.32□□□□□ -1.4
LINC00535-202ENST00000517785 SPZ1Q9BXG8 430 aa6.32□□□□□ -1.4
LINC00535-202ENST00000517785 ZNF334Q9HCZ1 680 aaPredicted RBP6.32□□□□□ -1.4
LINC00535-202ENST00000517785 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.32□□□□□ -1.4
LINC00535-202ENST00000517785 CHST7Q9NS84 486 aa6.32□□□□□ -1.4
LINC00535-202ENST00000517785 FNIP2Q9P278 1114 aa6.32□□□□□ -1.4
LINC00535-202ENST00000517785 ANKFY1Q9P2R3 1169 aa6.32□□□□□ -1.4
LINC00535-202ENST00000517785 SAMM50Q9Y512 469 aa6.32□□□□□ -1.4
LINC00535-202ENST00000517785 HES2Q9Y543 173 aa6.32□□□□□ -1.4
LINC00535-202ENST00000517785 TAF6LQ9Y6J9 622 aa6.32□□□□□ -1.4
LINC00535-202ENST00000517785 ZNF462Q96JM2 2506 aa6.32□□□□□ -1.4
LINC00535-202ENST00000517785 NCANO14594 1321 aa6.31□□□□□ -1.4
LINC00535-202ENST00000517785 SPAARA0A1B0GVQ0 90 aa6.31□□□□□ -1.4
LINC00535-202ENST00000517785 ARL5CA6NH57 179 aa6.31□□□□□ -1.4
LINC00535-202ENST00000517785 SLC38A8A6NNN8 435 aa6.31□□□□□ -1.4
LINC00535-202ENST00000517785 IPO5O00410 1097 aaKnown RBP6.31□□□□□ -1.4
LINC00535-202ENST00000517785 MEIS1O00470 390 aa6.31□□□□□ -1.4
LINC00535-202ENST00000517785 DCLK1O15075 740 aa6.31□□□□□ -1.4
LINC00535-202ENST00000517785 CHMP2AO43633 222 aa6.31□□□□□ -1.4
LINC00535-202ENST00000517785 SIN3BO75182 1162 aa6.31□□□□□ -1.4
LINC00535-202ENST00000517785 PSAPP07602 524 aa6.31□□□□□ -1.4
LINC00535-202ENST00000517785 RHOP08100 348 aa6.31□□□□□ -1.4
LINC00535-202ENST00000517785 HNRNPA1P09651 372 aaKnown RBP eCLIP6.31□□□□□ -1.4
LINC00535-202ENST00000517785 ITGA4P13612 1032 aa6.31□□□□□ -1.4
LINC00535-202ENST00000517785 ALAS2P22557 587 aa6.31□□□□□ -1.4
LINC00535-202ENST00000517785 VIPR2P41587 438 aa6.31□□□□□ -1.4
LINC00535-202ENST00000517785 RAP1GAPP47736 663 aa6.31□□□□□ -1.4
LINC00535-202ENST00000517785 CREB5Q02930 508 aa6.31□□□□□ -1.4
LINC00535-202ENST00000517785 DSC1Q08554 894 aa6.31□□□□□ -1.4
LINC00535-202ENST00000517785 TRDNQ13061 729 aa6.31□□□□□ -1.4
LINC00535-202ENST00000517785 NCOA4Q13772 614 aa6.31□□□□□ -1.4
LINC00535-202ENST00000517785 FAM78AQ5JUQ0 283 aa6.31□□□□□ -1.4
LINC00535-202ENST00000517785 TBCELQ5QJ74 424 aa6.31□□□□□ -1.4
LINC00535-202ENST00000517785 AXDND1Q5T1B0 1012 aaPredicted RBP6.31□□□□□ -1.4
LINC00535-202ENST00000517785 DAB2IPQ5VWQ8 1189 aa6.31□□□□□ -1.4
LINC00535-202ENST00000517785 PKN3Q6P5Z2 889 aa6.31□□□□□ -1.4
LINC00535-202ENST00000517785 VITQ6UXI7 678 aa6.31□□□□□ -1.4
LINC00535-202ENST00000517785 PROSER1Q86XN7 944 aa6.31□□□□□ -1.4
LINC00535-202ENST00000517785 SLC9A9Q8IVB4 645 aa6.31□□□□□ -1.4
LINC00535-202ENST00000517785 ZNF654Q8IZM8 581 aa6.31□□□□□ -1.4
LINC00535-202ENST00000517785 SMG8Q8ND04 991 aaKnown RBP6.31□□□□□ -1.4
LINC00535-202ENST00000517785 GAB3Q8WWW8 586 aa6.31□□□□□ -1.4
LINC00535-202ENST00000517785 RSPH1Q8WYR4 309 aa6.31□□□□□ -1.4
LINC00535-202ENST00000517785 ELSPBP1Q96BH3 223 aa6.31□□□□□ -1.4
LINC00535-202ENST00000517785 TCEAL4Q96EI5 215 aa6.31□□□□□ -1.4
LINC00535-202ENST00000517785 LRIG1Q96JA1 1093 aa6.31□□□□□ -1.4
LINC00535-202ENST00000517785 FAM167AQ96KS9 214 aa6.31□□□□□ -1.4
LINC00535-202ENST00000517785 CLSTN3Q9BQT9 956 aa6.31□□□□□ -1.4
LINC00535-202ENST00000517785 PAAF1Q9BRP4 392 aa6.31□□□□□ -1.4
LINC00535-202ENST00000517785 ZNF577Q9BSK1 485 aa6.31□□□□□ -1.4
LINC00535-202ENST00000517785 IER2Q9BTL4 223 aa6.31□□□□□ -1.4
LINC00535-202ENST00000517785 TRMT61BQ9BVS5 477 aaKnown RBP6.31□□□□□ -1.4
LINC00535-202ENST00000517785 COLEC11Q9BWP8 271 aa6.31□□□□□ -1.4
LINC00535-202ENST00000517785 EIF2AQ9BY44 585 aaKnown RBP6.31□□□□□ -1.4
LINC00535-202ENST00000517785 IL25Q9H293 177 aa6.31□□□□□ -1.4
LINC00535-202ENST00000517785 VPS45Q9NRW7 570 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms