RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 PNPLA7Q6ZV29 1317 aa0□□□□□ -2.41
RNU6-539P-201ENST00000516665 SLC29A4Q7RTT9 530 aa0□□□□□ -2.41
RNU6-539P-201ENST00000516665 ERMP1Q7Z2K6 904 aa0□□□□□ -2.41
RNU6-539P-201ENST00000516665 FBXO33Q7Z6M2 555 aa0□□□□□ -2.41
RNU6-539P-201ENST00000516665 ZNF227Q86WZ6 799 aa0□□□□□ -2.41
RNU6-539P-201ENST00000516665 FANCBQ8NB91 859 aa0□□□□□ -2.41
RNU6-539P-201ENST00000516665 MAFAQ8NHW3 353 aaPredicted RBP0□□□□□ -2.41
RNU6-539P-201ENST00000516665 CCDC140Q96MF4 163 aa0□□□□□ -2.41
RNU6-539P-201ENST00000516665 LINC00167Q96N53 147 aa0□□□□□ -2.41
RNU6-539P-201ENST00000516665 ADGRA2Q96PE1 1338 aa0□□□□□ -2.41
RNU6-539P-201ENST00000516665 MACROD1Q9BQ69 325 aa0□□□□□ -2.41
RNU6-539P-201ENST00000516665 ZSCAN21Q9Y5A6 473 aaPredicted RBP0□□□□□ -2.41
RNU6-539P-201ENST00000516665 A0A1W2PQH9 124 aa-0.01□□□□□ -2.41
RNU6-539P-201ENST00000516665 FAM47E-STBD1D6RA91 191 aa-0.01□□□□□ -2.41
RNU6-539P-201ENST00000516665 DSCR3O14972 297 aa-0.01□□□□□ -2.41
RNU6-539P-201ENST00000516665 PRLP01236 227 aa-0.01□□□□□ -2.41
RNU6-539P-201ENST00000516665 GCSHP23434 173 aa-0.01□□□□□ -2.41
RNU6-539P-201ENST00000516665 THBS4P35443 961 aa-0.01□□□□□ -2.41
RNU6-539P-201ENST00000516665 LRMPQ12912 555 aa-0.01□□□□□ -2.41
RNU6-539P-201ENST00000516665 ODF3L2Q3SX64 289 aa-0.01□□□□□ -2.41
RNU6-539P-201ENST00000516665 KLHDC8BQ8IXV7 354 aa-0.01□□□□□ -2.41
RNU6-539P-201ENST00000516665 SLC25A28Q96A46 364 aa-0.01□□□□□ -2.41
RNU6-539P-201ENST00000516665 PBKQ96KB5 322 aa-0.01□□□□□ -2.41
RNU6-539P-201ENST00000516665 OSBPL6Q9BZF3 934 aa-0.01□□□□□ -2.41
RNU6-539P-201ENST00000516665 SERTAD4Q9NUC0 356 aa-0.01□□□□□ -2.41
RNU6-539P-201ENST00000516665 KRTAP16-1A8MUX0 517 aa-0.02□□□□□ -2.41
RNU6-539P-201ENST00000516665 ZNF561-AS1K7EIQ3 104 aa-0.02□□□□□ -2.41
RNU6-539P-201ENST00000516665 BMPR1BO00238 502 aa-0.02□□□□□ -2.41
RNU6-539P-201ENST00000516665 ASAP2O43150 1006 aa-0.02□□□□□ -2.41
RNU6-539P-201ENST00000516665 KRT36O76013 467 aa-0.02□□□□□ -2.41
RNU6-539P-201ENST00000516665 RHOP08100 348 aa-0.02□□□□□ -2.41
RNU6-539P-201ENST00000516665 GSPT1P15170 499 aaKnown RBP-0.02□□□□□ -2.41
RNU6-539P-201ENST00000516665 ART1P52961 327 aa-0.02□□□□□ -2.41
RNU6-539P-201ENST00000516665 RBM6P78332 1123 aaKnown RBP-0.02□□□□□ -2.41
RNU6-539P-201ENST00000516665 SLC6A3Q01959 620 aa-0.02□□□□□ -2.41
RNU6-539P-201ENST00000516665 EGR4Q05215 589 aa-0.02□□□□□ -2.41
RNU6-539P-201ENST00000516665 EEF1A2Q05639 463 aaKnown RBP-0.02□□□□□ -2.41
RNU6-539P-201ENST00000516665 MTX1Q13505 466 aa-0.02□□□□□ -2.41
RNU6-539P-201ENST00000516665 INO80DQ53TQ3 878 aaPredicted RBP-0.02□□□□□ -2.41
RNU6-539P-201ENST00000516665 PRAMEF19Q5SWL8 479 aa-0.02□□□□□ -2.41
RNU6-539P-201ENST00000516665 C9orf57Q5W0N0 161 aa-0.02□□□□□ -2.41
RNU6-539P-201ENST00000516665 FOXR2Q6PJQ5 311 aa-0.02□□□□□ -2.41
RNU6-539P-201ENST00000516665 RSPO2Q6UXX9 243 aaPredicted RBP-0.02□□□□□ -2.41
RNU6-539P-201ENST00000516665 DSTYKQ6XUX3 929 aa-0.02□□□□□ -2.41
RNU6-539P-201ENST00000516665 DEF8Q6ZN54 512 aa-0.02□□□□□ -2.41
RNU6-539P-201ENST00000516665 ARMC9Q7Z3E5 817 aa-0.02□□□□□ -2.41
RNU6-539P-201ENST00000516665 ELP5Q8TE02 316 aa-0.02□□□□□ -2.41
RNU6-539P-201ENST00000516665 OIT3Q8WWZ8 545 aa-0.02□□□□□ -2.41
RNU6-539P-201ENST00000516665 TBC1D5Q92609 795 aa-0.02□□□□□ -2.41
RNU6-539P-201ENST00000516665 TMEM125Q96AQ2 219 aa-0.02□□□□□ -2.41
RNU6-539P-201ENST00000516665 ZNF428Q96B54 188 aa-0.02□□□□□ -2.41
RNU6-539P-201ENST00000516665 NLRP4Q96MN2 994 aa-0.02□□□□□ -2.41
RNU6-539P-201ENST00000516665 UHRF2Q96PU4 802 aa-0.02□□□□□ -2.41
RNU6-539P-201ENST00000516665 FERD3LQ96RJ6 166 aa-0.02□□□□□ -2.41
RNU6-539P-201ENST00000516665 DUSP9Q99956 384 aaKnown RBP-0.02□□□□□ -2.41
RNU6-539P-201ENST00000516665 ABCB10Q9NRK6 738 aa-0.02□□□□□ -2.41
RNU6-539P-201ENST00000516665 KLC4Q9NSK0 619 aa-0.02□□□□□ -2.41
RNU6-539P-201ENST00000516665 INTS13Q9NVM9 706 aa-0.02□□□□□ -2.41
RNU6-539P-201ENST00000516665 PPT2Q9UMR5 302 aa-0.02□□□□□ -2.41
RNU6-539P-201ENST00000516665 BTBD18B2RXH4 712 aa-0.03□□□□□ -2.41
RNU6-539P-201ENST00000516665 PRPF40AO75400 957 aaKnown RBP-0.03□□□□□ -2.41
RNU6-539P-201ENST00000516665 FSBPO95073 299 aa-0.03□□□□□ -2.41
RNU6-539P-201ENST00000516665 PPP3CBP16298 524 aa-0.03□□□□□ -2.41
RNU6-539P-201ENST00000516665 ZNF16P17020 682 aaPredicted RBP-0.03□□□□□ -2.41
RNU6-539P-201ENST00000516665 SLC6A2P23975 617 aa-0.03□□□□□ -2.41
RNU6-539P-201ENST00000516665 GRIA2P42262 883 aa-0.03□□□□□ -2.41
RNU6-539P-201ENST00000516665 PDLIM4P50479 330 aa-0.03□□□□□ -2.41
RNU6-539P-201ENST00000516665 CYP4F2P78329 520 aa-0.03□□□□□ -2.41
RNU6-539P-201ENST00000516665 CD69Q07108 199 aa-0.03□□□□□ -2.41
RNU6-539P-201ENST00000516665 PRTGQ2VWP7 1150 aa-0.03□□□□□ -2.41
RNU6-539P-201ENST00000516665 MFSD14BQ5SR56 506 aa-0.03□□□□□ -2.41
RNU6-539P-201ENST00000516665 FBXW10Q5XX13 1052 aa-0.03□□□□□ -2.41
RNU6-539P-201ENST00000516665 SLC39A5Q6ZMH5 540 aa-0.03□□□□□ -2.41
RNU6-539P-201ENST00000516665 USP53Q70EK8 1073 aa-0.03□□□□□ -2.41
RNU6-539P-201ENST00000516665 TXNDC2Q86VQ3 553 aa-0.03□□□□□ -2.41
RNU6-539P-201ENST00000516665 ANKRD13BQ86YJ7 626 aa-0.03□□□□□ -2.41
RNU6-539P-201ENST00000516665 NOSTRINQ8IVI9 506 aa-0.03□□□□□ -2.41
RNU6-539P-201ENST00000516665 UNC5BQ8IZJ1 945 aa-0.03□□□□□ -2.41
RNU6-539P-201ENST00000516665 GADD45GIP1Q8TAE8 222 aaPredicted RBP-0.03□□□□□ -2.41
RNU6-539P-201ENST00000516665 RTP4Q96DX8 246 aa-0.03□□□□□ -2.41
RNU6-539P-201ENST00000516665 ORAI2Q96SN7 254 aa-0.03□□□□□ -2.41
RNU6-539P-201ENST00000516665 UHRF1Q96T88 793 aaPredicted RBP-0.03□□□□□ -2.41
RNU6-539P-201ENST00000516665 TRMT61BQ9BVS5 477 aaKnown RBP-0.03□□□□□ -2.41
RNU6-539P-201ENST00000516665 RETREG1Q9H6L5 497 aa-0.03□□□□□ -2.41
RNU6-539P-201ENST00000516665 SEMA4BQ9NPR2 832 aaPredicted RBP-0.03□□□□□ -2.41
RNU6-539P-201ENST00000516665 THSD1Q9NS62 852 aa-0.03□□□□□ -2.41
RNU6-539P-201ENST00000516665 COL20A1Q9P218 1284 aa-0.03□□□□□ -2.41
RNU6-539P-201ENST00000516665 IGSF9Q9P2J2 1179 aa-0.03□□□□□ -2.41
RNU6-539P-201ENST00000516665 DKK3Q9UBP4 350 aa-0.03□□□□□ -2.41
RNU6-539P-201ENST00000516665 SIK3Q9Y2K2 1263 aa-0.03□□□□□ -2.41
RNU6-539P-201ENST00000516665 SLC12A7Q9Y666 1083 aa-0.03□□□□□ -2.41
RNU6-539P-201ENST00000516665 COL16A1Q07092 1604 aaPredicted RBP-0.03□□□□□ -2.41
RNU6-539P-201ENST00000516665 C17orf51A8MQB3 221 aa-0.04□□□□□ -2.42
RNU6-539P-201ENST00000516665 SCDO00767 359 aa-0.04□□□□□ -2.42
RNU6-539P-201ENST00000516665 KIF1CO43896 1103 aaKnown RBP-0.04□□□□□ -2.42
RNU6-539P-201ENST00000516665 GJB6O95452 261 aa-0.04□□□□□ -2.42
RNU6-539P-201ENST00000516665 FAM163BP0C2L3 166 aa-0.04□□□□□ -2.42
RNU6-539P-201ENST00000516665 ALAS1P13196 640 aa-0.04□□□□□ -2.42
RNU6-539P-201ENST00000516665 CDC25CP30307 473 aa-0.04□□□□□ -2.42
RNU6-539P-201ENST00000516665 NDUFV1P49821 464 aa-0.04□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms