RNA–Protein interactions for RNA: ENST00000516614.1

RNU6-229P-201, Transcript of RNA, U6 small nuclear 229, pseudogene, humanhuman

BASIC

Gene RNU6-229P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-229P-201ENST00000516614 NKD2Q969F2 451 aaPredicted RBP0.66□□□□□ -2.3
RNU6-229P-201ENST00000516614 RMDN1Q96DB5 314 aa0.66□□□□□ -2.3
RNU6-229P-201ENST00000516614 ZBTB10Q96DT7 871 aa0.66□□□□□ -2.3
RNU6-229P-201ENST00000516614 EDC3Q96F86 508 aaKnown RBP0.66□□□□□ -2.3
RNU6-229P-201ENST00000516614 NAF1Q96HR8 494 aaKnown RBP0.66□□□□□ -2.3
RNU6-229P-201ENST00000516614 LRIG1Q96JA1 1093 aa0.66□□□□□ -2.3
RNU6-229P-201ENST00000516614 SCYL1Q96KG9 808 aa0.66□□□□□ -2.3
RNU6-229P-201ENST00000516614 MRGPRX3Q96LB0 322 aa0.66□□□□□ -2.3
RNU6-229P-201ENST00000516614 CFAP53Q96M91 514 aa0.66□□□□□ -2.3
RNU6-229P-201ENST00000516614 PARK7Q99497 189 aaKnown RBP0.66□□□□□ -2.3
RNU6-229P-201ENST00000516614 NUP88Q99567 741 aaPredicted RBP0.66□□□□□ -2.3
RNU6-229P-201ENST00000516614 HNRNPABQ99729 332 aaKnown RBP0.66□□□□□ -2.3
RNU6-229P-201ENST00000516614 HAUS7Q99871 368 aa0.66□□□□□ -2.3
RNU6-229P-201ENST00000516614 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP0.66□□□□□ -2.3
RNU6-229P-201ENST00000516614 LSM14BQ9BX40 385 aaKnown RBP0.66□□□□□ -2.3
RNU6-229P-201ENST00000516614 GBP3Q9H0R5 595 aa0.66□□□□□ -2.3
RNU6-229P-201ENST00000516614 CDIP1Q9H305 208 aa0.66□□□□□ -2.3
RNU6-229P-201ENST00000516614 PRO3102Q9H379 93 aa0.66□□□□□ -2.3
RNU6-229P-201ENST00000516614 NELFAQ9H3P2 528 aa0.66□□□□□ -2.3
RNU6-229P-201ENST00000516614 HIPK3Q9H422 1215 aa0.66□□□□□ -2.3
RNU6-229P-201ENST00000516614 NOL6Q9H6R4 1146 aaKnown RBP0.66□□□□□ -2.3
RNU6-229P-201ENST00000516614 BCAS3Q9H6U6 928 aa0.66□□□□□ -2.3
RNU6-229P-201ENST00000516614 UBE2ZQ9H832 354 aaPredicted RBP0.66□□□□□ -2.3
RNU6-229P-201ENST00000516614 L2HGDHQ9H9P8 463 aa0.66□□□□□ -2.3
RNU6-229P-201ENST00000516614 MRS2Q9HD23 443 aa0.66□□□□□ -2.3
RNU6-229P-201ENST00000516614 TXNRD2Q9NNW7 524 aa0.66□□□□□ -2.3
RNU6-229P-201ENST00000516614 CD209Q9NNX6 404 aa0.66□□□□□ -2.3
RNU6-229P-201ENST00000516614 SLC6A20Q9NP91 592 aa0.66□□□□□ -2.3
RNU6-229P-201ENST00000516614 FSCN3Q9NQT6 498 aa0.66□□□□□ -2.3
RNU6-229P-201ENST00000516614 STARD7Q9NQZ5 370 aa0.66□□□□□ -2.3
RNU6-229P-201ENST00000516614 METTL5Q9NRN9 209 aaKnown RBP0.66□□□□□ -2.3
RNU6-229P-201ENST00000516614 TRMT13Q9NUP7 481 aaKnown RBP0.66□□□□□ -2.3
RNU6-229P-201ENST00000516614 POLR3BQ9NW08 1133 aaPredicted RBP0.66□□□□□ -2.3
RNU6-229P-201ENST00000516614 CWC25Q9NXE8 425 aaPredicted RBP0.66□□□□□ -2.3
RNU6-229P-201ENST00000516614 UBP1Q9NZI7 540 aa0.66□□□□□ -2.3
RNU6-229P-201ENST00000516614 TMOD4Q9NZQ9 345 aa0.66□□□□□ -2.3
RNU6-229P-201ENST00000516614 RAI14Q9P0K7 980 aa0.66□□□□□ -2.3
RNU6-229P-201ENST00000516614 GULP1Q9UBP9 304 aa0.66□□□□□ -2.3
RNU6-229P-201ENST00000516614 FTSJ1Q9UET6 329 aa0.66□□□□□ -2.3
RNU6-229P-201ENST00000516614 CGGBP1Q9UFW8 167 aaPredicted RBP0.66□□□□□ -2.3
RNU6-229P-201ENST00000516614 ITGB1BP2Q9UKP3 347 aa0.66□□□□□ -2.3
RNU6-229P-201ENST00000516614 BARX2Q9UMQ3 279 aaPredicted RBP0.66□□□□□ -2.3
RNU6-229P-201ENST00000516614 WASF3Q9UPY6 502 aa0.66□□□□□ -2.3
RNU6-229P-201ENST00000516614 PA2G4Q9UQ80 394 aaKnown RBP0.66□□□□□ -2.3
RNU6-229P-201ENST00000516614 GINS2Q9Y248 185 aa0.66□□□□□ -2.3
RNU6-229P-201ENST00000516614 RWDD3Q9Y3V2 267 aa0.66□□□□□ -2.3
RNU6-229P-201ENST00000516614 TIMM13Q9Y5L4 95 aaPredicted RBP0.66□□□□□ -2.3
RNU6-229P-201ENST00000516614 MTCH2Q9Y6C9 303 aa0.66□□□□□ -2.3
RNU6-229P-201ENST00000516614 DYNC1LI1Q9Y6G9 523 aaKnown RBP0.66□□□□□ -2.3
RNU6-229P-201ENST00000516614 NUP210Q8TEM1 1887 aaPredicted RBP0.66□□□□□ -2.3
RNU6-229P-201ENST00000516614 GON4LQ3T8J9 2241 aa0.66□□□□□ -2.3
RNU6-229P-201ENST00000516614 RTTNQ86VV8 2226 aa0.66□□□□□ -2.3
RNU6-229P-201ENST00000516614 ASCC3Q8N3C0 2202 aaKnown RBP0.66□□□□□ -2.3
RNU6-229P-201ENST00000516614 PDZD2O15018 2839 aa0.66□□□□□ -2.3
RNU6-229P-201ENST00000516614 RTL1A6NKG5 1358 aa0.66□□□□□ -2.3
RNU6-229P-201ENST00000516614 FER1L5A0AVI2 2057 aa0.66□□□□□ -2.3
RNU6-229P-201ENST00000516614 COL1A1P02452 1464 aaPredicted RBP0.66□□□□□ -2.3
RNU6-229P-201ENST00000516614 RELNP78509 3460 aa0.66□□□□□ -2.3
RNU6-229P-201ENST00000516614 ZNF462Q96JM2 2506 aa0.66□□□□□ -2.3
RNU6-229P-201ENST00000516614 COL6A6A6NMZ7 2263 aa0.66□□□□□ -2.3
RNU6-229P-201ENST00000516614 CENPEQ02224 2701 aa0.66□□□□□ -2.3
RNU6-229P-201ENST00000516614 FAM186AA6NE01 2351 aa0.65□□□□□ -2.3
RNU6-229P-201ENST00000516614 TRPM6Q9BX84 2022 aa0.65□□□□□ -2.3
RNU6-229P-201ENST00000516614 MAP1AP78559 2803 aaPredicted RBP0.65□□□□□ -2.3
RNU6-229P-201ENST00000516614 MAST3O60307 1309 aa0.65□□□□□ -2.3
RNU6-229P-201ENST00000516614 TTC28Q96AY4 2481 aa0.65□□□□□ -2.3
RNU6-229P-201ENST00000516614 DCHS1Q96JQ0 3298 aa0.65□□□□□ -2.3
RNU6-229P-201ENST00000516614 NUMA1Q14980 2115 aa0.65□□□□□ -2.3
RNU6-229P-201ENST00000516614 ZFHX3Q15911 3703 aa0.65□□□□□ -2.3
RNU6-229P-201ENST00000516614 DMXL2Q8TDJ6 3036 aa0.65□□□□□ -2.3
RNU6-229P-201ENST00000516614 SVILO95425 2214 aa0.65□□□□□ -2.3
RNU6-229P-201ENST00000516614 MED13LQ71F56 2210 aa0.65□□□□□ -2.3
RNU6-229P-201ENST00000516614 NUP210LQ5VU65 1888 aa0.65□□□□□ -2.3
RNU6-229P-201ENST00000516614 ZNF106Q9H2Y7 1883 aaKnown RBP0.65□□□□□ -2.3
RNU6-229P-201ENST00000516614 PTPRZ1P23471 2315 aaPredicted RBP0.65□□□□□ -2.3
RNU6-229P-201ENST00000516614 PCDH15Q96QU1 1955 aa0.65□□□□□ -2.31
RNU6-229P-201ENST00000516614 PRRC2CQ9Y520 2896 aaKnown RBP0.65□□□□□ -2.31
RNU6-229P-201ENST00000516614 NCOR2Q9Y618 2525 aa0.65□□□□□ -2.31
RNU6-229P-201ENST00000516614 COL12A1Q99715 3063 aa0.65□□□□□ -2.31
RNU6-229P-201ENST00000516614 FREM2Q5SZK8 3169 aa0.65□□□□□ -2.31
RNU6-229P-201ENST00000516614 A0A1W2PQH9 124 aa0.65□□□□□ -2.31
RNU6-229P-201ENST00000516614 A1L4Q6 167 aa0.65□□□□□ -2.31
RNU6-229P-201ENST00000516614 PI4KAP2A4QPH2 592 aa0.65□□□□□ -2.31
RNU6-229P-201ENST00000516614 FAM149AA5PLN7 773 aa0.65□□□□□ -2.31
RNU6-229P-201ENST00000516614 PRR23AA6NEV1 266 aa0.65□□□□□ -2.31
RNU6-229P-201ENST00000516614 TMEM191CA6NGB0 347 aa0.65□□□□□ -2.31
RNU6-229P-201ENST00000516614 KRTAP29-1A8MX34 341 aaPredicted RBP0.65□□□□□ -2.31
RNU6-229P-201ENST00000516614 KIF28PB7ZC32 967 aa0.65□□□□□ -2.31
RNU6-229P-201ENST00000516614 NT5C1B-RDH14C9J2C7 533 aa0.65□□□□□ -2.31
RNU6-229P-201ENST00000516614 PROB1E7EW31 1015 aa0.65□□□□□ -2.31
RNU6-229P-201ENST00000516614 PI4K2BG5E9Z4 385 aa0.65□□□□□ -2.31
RNU6-229P-201ENST00000516614 MATN2O00339 956 aa0.65□□□□□ -2.31
RNU6-229P-201ENST00000516614 GRM6O15303 877 aa0.65□□□□□ -2.31
RNU6-229P-201ENST00000516614 PDE8AO60658 829 aa0.65□□□□□ -2.31
RNU6-229P-201ENST00000516614 MAFKO60675 156 aa0.65□□□□□ -2.31
RNU6-229P-201ENST00000516614 PPFIA2O75334 1257 aa0.65□□□□□ -2.31
RNU6-229P-201ENST00000516614 MAFO75444 373 aaPredicted RBP0.65□□□□□ -2.31
RNU6-229P-201ENST00000516614 FLOT1O75955 427 aa0.65□□□□□ -2.31
RNU6-229P-201ENST00000516614 RHOBTB3O94955 611 aa0.65□□□□□ -2.31
RNU6-229P-201ENST00000516614 GJB5O95377 273 aa0.65□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms