RNA–Protein interactions for RNA: ENST00000515621.5

NR1I3-234, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-234ENST00000515621 WNT8BQ93098 351 aa9.73□□□□□ -0.85
NR1I3-234ENST00000515621 ZNF560Q96MR9 790 aa9.73□□□□□ -0.85
NR1I3-234ENST00000515621 DEFB118Q96PH6 123 aa9.73□□□□□ -0.85
NR1I3-234ENST00000515621 DESI2Q9BSY9 194 aa9.73□□□□□ -0.85
NR1I3-234ENST00000515621 NXF3Q9H4D5 531 aaKnown RBP9.73□□□□□ -0.85
NR1I3-234ENST00000515621 TRMT13Q9NUP7 481 aaKnown RBP9.73□□□□□ -0.85
NR1I3-234ENST00000515621 FAM105AQ9NUU6 356 aa9.73□□□□□ -0.85
NR1I3-234ENST00000515621 DPP3Q9NY33 737 aa9.73□□□□□ -0.85
NR1I3-234ENST00000515621 SIX4Q9UIU6 781 aa9.73□□□□□ -0.85
NR1I3-234ENST00000515621 NOCTQ9UK39 431 aaKnown RBP9.73□□□□□ -0.85
NR1I3-234ENST00000515621 PADI3Q9ULW8 664 aa9.73□□□□□ -0.85
NR1I3-234ENST00000515621 REXO2Q9Y3B8 237 aaKnown RBP9.73□□□□□ -0.85
NR1I3-234ENST00000515621 PCDHA13Q9Y5I0 950 aa9.73□□□□□ -0.85
NR1I3-234ENST00000515621 A0A087X0T9 212 aa9.72□□□□□ -0.85
NR1I3-234ENST00000515621 SMIM28A0A1B0GU29 152 aa9.72□□□□□ -0.85
NR1I3-234ENST00000515621 USP27XA6NNY8 438 aa9.72□□□□□ -0.85
NR1I3-234ENST00000515621 ZNF263O14978 683 aa9.72□□□□□ -0.85
NR1I3-234ENST00000515621 LSM8O95777 96 aaKnown RBP9.72□□□□□ -0.85
NR1I3-234ENST00000515621 FAM228BP0C875 321 aa9.72□□□□□ -0.85
NR1I3-234ENST00000515621 TNNT1P13805 278 aa9.72□□□□□ -0.85
NR1I3-234ENST00000515621 ACO1P21399 889 aaKnown RBP9.72□□□□□ -0.85
NR1I3-234ENST00000515621 ARHGAP25P42331 645 aa9.72□□□□□ -0.85
NR1I3-234ENST00000515621 MAGEA1P43355 309 aa9.72□□□□□ -0.85
NR1I3-234ENST00000515621 ASPAP45381 313 aa9.72□□□□□ -0.85
NR1I3-234ENST00000515621 HADHBP55084 474 aaKnown RBP9.72□□□□□ -0.85
NR1I3-234ENST00000515621 MYL6P60660 151 aa9.72□□□□□ -0.85
NR1I3-234ENST00000515621 OSTNP61366 133 aa9.72□□□□□ -0.85
NR1I3-234ENST00000515621 CDR2Q01850 454 aa9.72□□□□□ -0.85
NR1I3-234ENST00000515621 INCA1Q0VD86 236 aa9.72□□□□□ -0.85
NR1I3-234ENST00000515621 ARHGAP44Q17R89 818 aa9.72□□□□□ -0.85
NR1I3-234ENST00000515621 ZNF618Q5T7W0 954 aa9.72□□□□□ -0.85
NR1I3-234ENST00000515621 LMBRD2Q68DH5 695 aaPredicted RBP9.72□□□□□ -0.85
NR1I3-234ENST00000515621 LRRC8DQ7L1W4 858 aa9.72□□□□□ -0.85
NR1I3-234ENST00000515621 DPH6Q7L8W6 267 aa9.72□□□□□ -0.85
NR1I3-234ENST00000515621 CDR2LQ86X02 465 aaPredicted RBP9.72□□□□□ -0.85
NR1I3-234ENST00000515621 ACRBPQ8NEB7 543 aa9.72□□□□□ -0.85
NR1I3-234ENST00000515621 TRIM58Q8NG06 486 aa9.72□□□□□ -0.85
NR1I3-234ENST00000515621 TRIM11Q96F44 468 aa9.72□□□□□ -0.85
NR1I3-234ENST00000515621 C16orf45Q96MC5 204 aaPredicted RBP9.72□□□□□ -0.85
NR1I3-234ENST00000515621 AGPAT1Q99943 283 aa9.72□□□□□ -0.85
NR1I3-234ENST00000515621 ISCUQ9H1K1 167 aa9.72□□□□□ -0.85
NR1I3-234ENST00000515621 ELAC1Q9H777 363 aaKnown RBP9.72□□□□□ -0.85
NR1I3-234ENST00000515621 APOBEC3GQ9HC16 384 aaKnown RBP9.72□□□□□ -0.85
NR1I3-234ENST00000515621 RGS18Q9NS28 235 aa9.72□□□□□ -0.85
NR1I3-234ENST00000515621 TRMT1Q9NXH9 659 aaKnown RBP9.72□□□□□ -0.85
NR1I3-234ENST00000515621 GDAP2Q9NXN4 497 aa9.72□□□□□ -0.85
NR1I3-234ENST00000515621 SNTG2Q9NY99 539 aa9.72□□□□□ -0.85
NR1I3-234ENST00000515621 ADAMTS1Q9UHI8 967 aa9.72□□□□□ -0.85
NR1I3-234ENST00000515621 TSKSQ9UJT2 592 aa9.72□□□□□ -0.85
NR1I3-234ENST00000515621 KIAA1257Q9ULG3 409 aa9.72□□□□□ -0.85
NR1I3-234ENST00000515621 NUB1Q9Y5A7 615 aa9.72□□□□□ -0.85
NR1I3-234ENST00000515621 ANK1P16157 1881 aa9.71□□□□□ -0.85
NR1I3-234ENST00000515621 ARHGEF37A1IGU5 675 aa9.71□□□□□ -0.86
NR1I3-234ENST00000515621 ANKRD62A6NC57 917 aa9.71□□□□□ -0.86
NR1I3-234ENST00000515621 DCDC2CA8MYV0 355 aa9.71□□□□□ -0.86
NR1I3-234ENST00000515621 DDX3XO00571 662 aaKnown RBP eCLIP9.71□□□□□ -0.86
NR1I3-234ENST00000515621 LRRN2O75325 713 aa9.71□□□□□ -0.86
NR1I3-234ENST00000515621 CST3P01034 146 aaPredicted RBP9.71□□□□□ -0.86
NR1I3-234ENST00000515621 ITGB3P05106 788 aa9.71□□□□□ -0.86
NR1I3-234ENST00000515621 PLEKP08567 350 aaPredicted RBP9.71□□□□□ -0.86
NR1I3-234ENST00000515621 CTSHP09668 335 aa9.71□□□□□ -0.86
NR1I3-234ENST00000515621 H2AFZP0C0S5 128 aa9.71□□□□□ -0.86
NR1I3-234ENST00000515621 TMEM253P0C7T8 217 aa9.71□□□□□ -0.86
NR1I3-234ENST00000515621 ITGA4P13612 1032 aa9.71□□□□□ -0.86
NR1I3-234ENST00000515621 CYP11B1P15538 503 aa9.71□□□□□ -0.86
NR1I3-234ENST00000515621 TNFAIP3P21580 790 aa9.71□□□□□ -0.86
NR1I3-234ENST00000515621 RPL9P32969 192 aaKnown RBP9.71□□□□□ -0.86
NR1I3-234ENST00000515621 RFC2P35250 354 aa9.71□□□□□ -0.86
NR1I3-234ENST00000515621 GJA8P48165 433 aa9.71□□□□□ -0.86
NR1I3-234ENST00000515621 TERF1P54274 439 aa9.71□□□□□ -0.86
NR1I3-234ENST00000515621 ARID5AQ03989 594 aa9.71□□□□□ -0.86
NR1I3-234ENST00000515621 MTFR1Q15390 333 aa9.71□□□□□ -0.86
NR1I3-234ENST00000515621 STILQ15468 1287 aa9.71□□□□□ -0.86
NR1I3-234ENST00000515621 SV2CQ496J9 727 aa9.71□□□□□ -0.86
NR1I3-234ENST00000515621 CCDC122Q5T0U0 273 aa9.71□□□□□ -0.86
NR1I3-234ENST00000515621 H2AFVQ71UI9 128 aa9.71□□□□□ -0.86
NR1I3-234ENST00000515621 LIMS2Q7Z4I7 341 aa9.71□□□□□ -0.86
NR1I3-234ENST00000515621 RHOT2Q8IXI1 618 aa9.71□□□□□ -0.86
NR1I3-234ENST00000515621 OLIG1Q8TAK6 271 aa9.71□□□□□ -0.86
NR1I3-234ENST00000515621 U2AF1L4Q8WU68 220 aaKnown RBP9.71□□□□□ -0.86
NR1I3-234ENST00000515621 DDX1Q92499 740 aaKnown RBP9.71□□□□□ -0.86
NR1I3-234ENST00000515621 SECISBP2LQ93073 1101 aaKnown RBP9.71□□□□□ -0.86
NR1I3-234ENST00000515621 TATDN2Q93075 761 aa9.71□□□□□ -0.86
NR1I3-234ENST00000515621 HPDLQ96IR7 371 aa9.71□□□□□ -0.86
NR1I3-234ENST00000515621 VCPIP1Q96JH7 1222 aa9.71□□□□□ -0.86
NR1I3-234ENST00000515621 UROC1Q96N76 676 aa9.71□□□□□ -0.86
NR1I3-234ENST00000515621 PPP1R10Q96QC0 940 aaKnown RBP9.71□□□□□ -0.86
NR1I3-234ENST00000515621 PI4K2AQ9BTU6 479 aa9.71□□□□□ -0.86
NR1I3-234ENST00000515621 ZNF518BQ9C0D4 1074 aa9.71□□□□□ -0.86
NR1I3-234ENST00000515621 AGO3Q9H9G7 860 aaKnown RBP9.71□□□□□ -0.86
NR1I3-234ENST00000515621 CISHQ9NSE2 258 aa9.71□□□□□ -0.86
NR1I3-234ENST00000515621 LCMT1Q9UIC8 334 aa9.71□□□□□ -0.86
NR1I3-234ENST00000515621 PCDHGA10Q9Y5H3 936 aa9.71□□□□□ -0.86
NR1I3-234ENST00000515621 UMODL1Q5DID0 1318 aa9.71□□□□□ -0.86
NR1I3-234ENST00000515621 PIRO00625 290 aa9.7□□□□□ -0.86
NR1I3-234ENST00000515621 CYP26A1O43174 497 aa9.7□□□□□ -0.86
NR1I3-234ENST00000515621 MED7O43513 233 aa9.7□□□□□ -0.86
NR1I3-234ENST00000515621 RTN2O75298 545 aa9.7□□□□□ -0.86
NR1I3-234ENST00000515621 TACC1O75410 805 aa9.7□□□□□ -0.86
NR1I3-234ENST00000515621 CXCL10P02778 98 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms