RNA–Protein interactions for RNA: ENST00000515562.1

DDX41-217, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 1,184 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-217ENST00000515562 CCDC105Q8IYK2 499 aa18.97■□□□□ 0.63
DDX41-217ENST00000515562 ING5Q8WYH8 240 aa18.97■□□□□ 0.63
DDX41-217ENST00000515562 CORO1BQ9BR76 489 aa18.97■□□□□ 0.63
DDX41-217ENST00000515562 TBC1D17Q9HA65 648 aa18.97■□□□□ 0.63
DDX41-217ENST00000515562 FOXD4L1Q9NU39 408 aa18.97■□□□□ 0.63
DDX41-217ENST00000515562 AGO2Q9UKV8 859 aaKnown RBP18.97■□□□□ 0.63
DDX41-217ENST00000515562 EXOC7Q9UPT5 735 aa18.97■□□□□ 0.63
DDX41-217ENST00000515562 C2CD2Q9Y426 696 aa18.97■□□□□ 0.63
DDX41-217ENST00000515562 OR6C75A6NL08 312 aa18.96■□□□□ 0.63
DDX41-217ENST00000515562 ANKRD63C9JTQ0 380 aa18.96■□□□□ 0.63
DDX41-217ENST00000515562 ZNF197O14709 1029 aa18.96■□□□□ 0.63
DDX41-217ENST00000515562 PI15O43692 258 aa18.96■□□□□ 0.63
DDX41-217ENST00000515562 ODC1P11926 461 aa18.96■□□□□ 0.63
DDX41-217ENST00000515562 TYMPP19971 482 aa18.96■□□□□ 0.63
DDX41-217ENST00000515562 ACOT2P49753 483 aa18.96■□□□□ 0.63
DDX41-217ENST00000515562 POSTNQ15063 836 aa18.96■□□□□ 0.63
DDX41-217ENST00000515562 IQCEQ6IPM2 695 aa18.96■□□□□ 0.63
DDX41-217ENST00000515562 PDZD4Q76G19 769 aaPredicted RBP18.96■□□□□ 0.63
DDX41-217ENST00000515562 TMEM130Q8N3G9 435 aa18.96■□□□□ 0.63
DDX41-217ENST00000515562 ST13P5Q8NFI4 369 aaPredicted RBP18.96■□□□□ 0.63
DDX41-217ENST00000515562 POMGNT1Q8WZA1 660 aa18.96■□□□□ 0.63
DDX41-217ENST00000515562 DNAJC19Q96DA6 116 aa18.96■□□□□ 0.63
DDX41-217ENST00000515562 SHDQ96IW2 340 aa18.96■□□□□ 0.63
DDX41-217ENST00000515562 RPP25Q9BUL9 199 aaKnown RBP18.96■□□□□ 0.63
DDX41-217ENST00000515562 OLFML3Q9NRN5 406 aa18.96■□□□□ 0.63
DDX41-217ENST00000515562 ANK1P16157 1881 aa18.96■□□□□ 0.63
DDX41-217ENST00000515562 TSC2P49815 1807 aa18.95■□□□□ 0.62
DDX41-217ENST00000515562 TISP43B9A030 160 aa18.95■□□□□ 0.62
DDX41-217ENST00000515562 ECI2O75521 394 aa18.95■□□□□ 0.62
DDX41-217ENST00000515562 MICAL2O94851 1124 aa18.95■□□□□ 0.62
DDX41-217ENST00000515562 LILRA4P59901 499 aa18.95■□□□□ 0.62
DDX41-217ENST00000515562 GPC5P78333 572 aa18.95■□□□□ 0.62
DDX41-217ENST00000515562 PFKPQ01813 784 aa18.95■□□□□ 0.62
DDX41-217ENST00000515562 ALCAMQ13740 583 aa18.95■□□□□ 0.62
DDX41-217ENST00000515562 STK38Q15208 465 aa18.95■□□□□ 0.62
DDX41-217ENST00000515562 L1TD1Q5T7N2 865 aaKnown RBP18.95■□□□□ 0.62
DDX41-217ENST00000515562 CYP4A22Q5TCH4 519 aa18.95■□□□□ 0.62
DDX41-217ENST00000515562 C9orf57Q5W0N0 161 aa18.95■□□□□ 0.62
DDX41-217ENST00000515562 OVOS1Q6IE37 1185 aa18.95■□□□□ 0.62
DDX41-217ENST00000515562 RNF19BQ6ZMZ0 732 aa18.95■□□□□ 0.62
DDX41-217ENST00000515562 DTWD2Q8NBA8 298 aa18.95■□□□□ 0.62
DDX41-217ENST00000515562 LEMD2Q8NC56 503 aa18.95■□□□□ 0.62
DDX41-217ENST00000515562 SNX21Q969T3 373 aa18.95■□□□□ 0.62
DDX41-217ENST00000515562 ACCSQ96QU6 501 aa18.95■□□□□ 0.62
DDX41-217ENST00000515562 KXD1Q9BQD3 176 aa18.95■□□□□ 0.62
DDX41-217ENST00000515562 STRA6Q9BX79 667 aa18.95■□□□□ 0.62
DDX41-217ENST00000515562 TIMM13Q9Y5L4 95 aaPredicted RBP18.95■□□□□ 0.62
DDX41-217ENST00000515562 PPEF2O14830 753 aa18.94■□□□□ 0.62
DDX41-217ENST00000515562 IL18RAPO95256 599 aa18.94■□□□□ 0.62
DDX41-217ENST00000515562 GCNT3O95395 438 aa18.94■□□□□ 0.62
DDX41-217ENST00000515562 IDEP14735 1019 aa18.94■□□□□ 0.62
DDX41-217ENST00000515562 CEBPBP17676 345 aa18.94■□□□□ 0.62
DDX41-217ENST00000515562 TWF1Q12792 350 aa18.94■□□□□ 0.62
DDX41-217ENST00000515562 PLD1Q13393 1074 aa18.94■□□□□ 0.62
DDX41-217ENST00000515562 MYBPC2Q14324 1141 aa18.94■□□□□ 0.62
DDX41-217ENST00000515562 PRSS36Q5K4E3 855 aa18.94■□□□□ 0.62
DDX41-217ENST00000515562 MCRS1Q96EZ8 462 aa18.94■□□□□ 0.62
DDX41-217ENST00000515562 ZNF512Q96ME7 567 aaPredicted RBP18.94■□□□□ 0.62
DDX41-217ENST00000515562 ZNF396Q96N95 335 aaPredicted RBP18.94■□□□□ 0.62
DDX41-217ENST00000515562 ASAH2Q9NR71 780 aa18.94■□□□□ 0.62
DDX41-217ENST00000515562 YIPF1Q9Y548 306 aa18.94■□□□□ 0.62
DDX41-217ENST00000515562 PCDHB13Q9Y5F0 798 aa18.94■□□□□ 0.62
DDX41-217ENST00000515562 A0A087X0B3 334 aa18.93■□□□□ 0.62
DDX41-217ENST00000515562 ANO9A1A5B4 782 aa18.93■□□□□ 0.62
DDX41-217ENST00000515562 FRMD3A2A2Y4 597 aa18.93■□□□□ 0.62
DDX41-217ENST00000515562 PROB1E7EW31 1015 aa18.93■□□□□ 0.62
DDX41-217ENST00000515562 PIRO00625 290 aa18.93■□□□□ 0.62
DDX41-217ENST00000515562 PDIA4P13667 645 aaKnown RBP18.93■□□□□ 0.62
DDX41-217ENST00000515562 ADSSP30520 456 aa18.93■□□□□ 0.62
DDX41-217ENST00000515562 GPR17Q13304 367 aa18.93■□□□□ 0.62
DDX41-217ENST00000515562 NT5DC4Q86YG4 428 aa18.93■□□□□ 0.62
DDX41-217ENST00000515562 LINC00301Q8NCQ3 95 aa18.93■□□□□ 0.62
DDX41-217ENST00000515562 SENP8Q96LD8 212 aa18.93■□□□□ 0.62
DDX41-217ENST00000515562 TBC1D7Q9P0N9 293 aa18.93■□□□□ 0.62
DDX41-217ENST00000515562 DSEQ9UL01 958 aa18.93■□□□□ 0.62
DDX41-217ENST00000515562 SPTLC2O15270 562 aa18.92■□□□□ 0.62
DDX41-217ENST00000515562 GFRA3O60609 400 aa18.92■□□□□ 0.62
DDX41-217ENST00000515562 PPP6R2O75170 966 aa18.92■□□□□ 0.62
DDX41-217ENST00000515562 NBL1P41271 181 aa18.92■□□□□ 0.62
DDX41-217ENST00000515562 EPHA5P54756 1037 aa18.92■□□□□ 0.62
DDX41-217ENST00000515562 STARD6P59095 220 aa18.92■□□□□ 0.62
DDX41-217ENST00000515562 PRKCQQ04759 706 aa18.92■□□□□ 0.62
DDX41-217ENST00000515562 ANGPT1Q15389 498 aa18.92■□□□□ 0.62
DDX41-217ENST00000515562 MLF2Q15773 248 aaPredicted RBP18.92■□□□□ 0.62
DDX41-217ENST00000515562 ARMCX5Q6P1M9 558 aa18.92■□□□□ 0.62
DDX41-217ENST00000515562 CRELD2Q6UXH1 353 aaPredicted RBP18.92■□□□□ 0.62
DDX41-217ENST00000515562 HSCBQ8IWL3 235 aa18.92■□□□□ 0.62
DDX41-217ENST00000515562 CCDC65Q8IXS2 484 aa18.92■□□□□ 0.62
DDX41-217ENST00000515562 PDILTQ8N807 584 aa18.92■□□□□ 0.62
DDX41-217ENST00000515562 PJA1Q8NG27 643 aa18.92■□□□□ 0.62
DDX41-217ENST00000515562 ELSPBP1Q96BH3 223 aa18.92■□□□□ 0.62
DDX41-217ENST00000515562 PGLYRP2Q96PD5 576 aa18.92■□□□□ 0.62
DDX41-217ENST00000515562 LRRC27Q9C0I9 530 aa18.92■□□□□ 0.62
DDX41-217ENST00000515562 TNMDQ9H2S6 317 aa18.92■□□□□ 0.62
DDX41-217ENST00000515562 DPP3Q9NY33 737 aa18.92■□□□□ 0.62
DDX41-217ENST00000515562 CEP72Q9P209 647 aa18.92■□□□□ 0.62
DDX41-217ENST00000515562 SIT1Q9Y3P8 196 aa18.92■□□□□ 0.62
DDX41-217ENST00000515562 SPTLC1O15269 473 aa18.91■□□□□ 0.62
DDX41-217ENST00000515562 YEATS4O95619 227 aa18.91■□□□□ 0.62
DDX41-217ENST00000515562 CYP11A1P05108 521 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms