RNA–Protein interactions for RNA: ENST00000515223.1

TRIM41-207, Transcript of tripartite motif containing 41, humanhuman

TSL 2

Gene TRIM41, Length 5,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-207ENST00000515223 TRIML2Q8N7C3 387 aa16.83■□□□□ 0.28
TRIM41-207ENST00000515223 ARRDC4Q8NCT1 418 aa16.83■□□□□ 0.28
TRIM41-207ENST00000515223 AMACRQ9UHK6 382 aa16.83■□□□□ 0.28
TRIM41-207ENST00000515223 PPP1R37O75864 691 aa16.83■□□□□ 0.28
TRIM41-207ENST00000515223 CD44P16070 742 aaKnown RBP16.83■□□□□ 0.28
TRIM41-207ENST00000515223 IRAK1P51617 712 aa16.83■□□□□ 0.28
TRIM41-207ENST00000515223 KCNB1Q14721 858 aa16.83■□□□□ 0.28
TRIM41-207ENST00000515223 MAPRE1Q15691 268 aaKnown RBP16.83■□□□□ 0.28
TRIM41-207ENST00000515223 KDELC2Q7Z4H8 507 aa16.83■□□□□ 0.28
TRIM41-207ENST00000515223 MOV10L1Q9BXT6 1211 aaKnown RBP16.83■□□□□ 0.28
TRIM41-207ENST00000515223 CATSPERBQ9H7T0 1116 aa16.83■□□□□ 0.28
TRIM41-207ENST00000515223 SPATA31A1Q5TZJ5 1347 aa16.83■□□□□ 0.28
TRIM41-207ENST00000515223 LMTK2Q8IWU2 1503 aa16.82■□□□□ 0.28
TRIM41-207ENST00000515223 MDH1P40925 334 aaKnown RBP16.82■□□□□ 0.28
TRIM41-207ENST00000515223 PDAP1Q13442 181 aaKnown RBP16.82■□□□□ 0.28
TRIM41-207ENST00000515223 P3H1Q32P28 736 aa16.82■□□□□ 0.28
TRIM41-207ENST00000515223 PKN3Q6P5Z2 889 aa16.82■□□□□ 0.28
TRIM41-207ENST00000515223 ADSSL1Q8N142 457 aa16.82■□□□□ 0.28
TRIM41-207ENST00000515223 ARHGAP18Q8N392 663 aa16.82■□□□□ 0.28
TRIM41-207ENST00000515223 TSPAN17Q96FV3 270 aa16.82■□□□□ 0.28
TRIM41-207ENST00000515223 GRID2IPA4D2P6 1211 aa16.82■□□□□ 0.28
TRIM41-207ENST00000515223 PPP1R3GB7ZBB8 358 aa16.82■□□□□ 0.28
TRIM41-207ENST00000515223 SLC15A2Q16348 729 aa16.82■□□□□ 0.28
TRIM41-207ENST00000515223 OOSP2Q86WS3 158 aa16.82■□□□□ 0.28
TRIM41-207ENST00000515223 ZNF34Q8IZ26 560 aa16.82■□□□□ 0.28
TRIM41-207ENST00000515223 FAM167BQ9BTA0 163 aa16.82■□□□□ 0.28
TRIM41-207ENST00000515223 SPATA16Q9BXB7 569 aa16.82■□□□□ 0.28
TRIM41-207ENST00000515223 NDE1Q9NXR1 346 aa16.82■□□□□ 0.28
TRIM41-207ENST00000515223 SCOCQ9UIL1 159 aa16.82■□□□□ 0.28
TRIM41-207ENST00000515223 LMNAP02545 664 aaKnown RBP16.82■□□□□ 0.28
TRIM41-207ENST00000515223 SRGNP10124 158 aa16.82■□□□□ 0.28
TRIM41-207ENST00000515223 PNPLA4P41247 253 aa16.82■□□□□ 0.28
TRIM41-207ENST00000515223 SAMD7Q7Z3H4 446 aa16.82■□□□□ 0.28
TRIM41-207ENST00000515223 KIRREL3Q8IZU9 778 aa16.82■□□□□ 0.28
TRIM41-207ENST00000515223 UCMAQ8WVF2 138 aa16.82■□□□□ 0.28
TRIM41-207ENST00000515223 RIT2Q99578 217 aa16.82■□□□□ 0.28
TRIM41-207ENST00000515223 SNX5Q9Y5X3 404 aa16.82■□□□□ 0.28
TRIM41-207ENST00000515223 C17orf102A2RUQ5 167 aa16.82■□□□□ 0.28
TRIM41-207ENST00000515223 CAMTA2O94983 1202 aa16.82■□□□□ 0.28
TRIM41-207ENST00000515223 PTPAQ15257 358 aa16.82■□□□□ 0.28
TRIM41-207ENST00000515223 TRADDQ15628 312 aa16.82■□□□□ 0.28
TRIM41-207ENST00000515223 KRT35Q92764 455 aa16.82■□□□□ 0.28
TRIM41-207ENST00000515223 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.82■□□□□ 0.28
TRIM41-207ENST00000515223 HOXA2O43364 376 aa16.81■□□□□ 0.28
TRIM41-207ENST00000515223 SESN2P58004 480 aaPredicted RBP16.81■□□□□ 0.28
TRIM41-207ENST00000515223 TWF1Q12792 350 aa16.81■□□□□ 0.28
TRIM41-207ENST00000515223 NCAPHQ15003 741 aa16.81■□□□□ 0.28
TRIM41-207ENST00000515223 IZUMO3Q5VZ72 239 aa16.81■□□□□ 0.28
TRIM41-207ENST00000515223 CCDC137Q6PK04 289 aaKnown RBP16.81■□□□□ 0.28
TRIM41-207ENST00000515223 CCT8L2Q96SF2 557 aa16.81■□□□□ 0.28
TRIM41-207ENST00000515223 SLC13A1Q9BZW2 595 aa16.81■□□□□ 0.28
TRIM41-207ENST00000515223 CCSER1Q9C0I3 900 aa16.81■□□□□ 0.28
TRIM41-207ENST00000515223 ADGRB2O60241 1585 aa16.81■□□□□ 0.28
TRIM41-207ENST00000515223 SUPT3HO75486 399 aa16.81■□□□□ 0.28
TRIM41-207ENST00000515223 ATP5HO75947 161 aa16.81■□□□□ 0.28
TRIM41-207ENST00000515223 KITP10721 976 aa16.81■□□□□ 0.28
TRIM41-207ENST00000515223 POLE2P56282 527 aa16.81■□□□□ 0.28
TRIM41-207ENST00000515223 CORO7P57737 925 aa16.81■□□□□ 0.28
TRIM41-207ENST00000515223 ZIM3Q96PE6 472 aa16.81■□□□□ 0.28
TRIM41-207ENST00000515223 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.81■□□□□ 0.28
TRIM41-207ENST00000515223 RNF103-CHMP3A0A140T963 221 aa16.81■□□□□ 0.28
TRIM41-207ENST00000515223 RCOR2Q8IZ40 523 aa16.81■□□□□ 0.28
TRIM41-207ENST00000515223 EPB41L4AQ9HCS5 686 aaPredicted RBP16.81■□□□□ 0.28
TRIM41-207ENST00000515223 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.81■□□□□ 0.283e-7■■■■□ 24.6
TRIM41-207ENST00000515223 KCNN4O15554 427 aa16.81■□□□□ 0.28
TRIM41-207ENST00000515223 ARSEP51690 589 aa16.81■□□□□ 0.28
TRIM41-207ENST00000515223 SEC24CP53992 1094 aa16.81■□□□□ 0.28
TRIM41-207ENST00000515223 KRT72Q14CN4 511 aa16.81■□□□□ 0.28
TRIM41-207ENST00000515223 CHSY1Q86X52 802 aa16.81■□□□□ 0.28
TRIM41-207ENST00000515223 HNRNPLLQ8WVV9 542 aaKnown RBP16.81■□□□□ 0.28
TRIM41-207ENST00000515223 FAM129AQ9BZQ8 928 aa16.81■□□□□ 0.28
TRIM41-207ENST00000515223 TMEM39BQ9GZU3 492 aa16.81■□□□□ 0.28
TRIM41-207ENST00000515223 ADA2Q9NZK5 511 aa16.81■□□□□ 0.28
TRIM41-207ENST00000515223 GTPBP10A4D1E9 387 aaKnown RBP16.81■□□□□ 0.28
TRIM41-207ENST00000515223 SASH3O75995 380 aa16.81■□□□□ 0.28
TRIM41-207ENST00000515223 SNRNP35Q16560 246 aaKnown RBP16.81■□□□□ 0.28
TRIM41-207ENST00000515223 CYP4A22Q5TCH4 519 aa16.81■□□□□ 0.28
TRIM41-207ENST00000515223 BARGINQ6ZT62 677 aa16.81■□□□□ 0.28
TRIM41-207ENST00000515223 C16orf86Q6ZW13 317 aa16.81■□□□□ 0.28
TRIM41-207ENST00000515223 ABHD8Q96I13 439 aa16.81■□□□□ 0.28
TRIM41-207ENST00000515223 MAP3K14Q99558 947 aa16.81■□□□□ 0.28
TRIM41-207ENST00000515223 ZNF446Q9NWS9 450 aa16.81■□□□□ 0.28
TRIM41-207ENST00000515223 PRG3Q9Y2Y8 225 aaPredicted RBP16.81■□□□□ 0.28
TRIM41-207ENST00000515223 EEF2KO00418 725 aaKnown RBP16.8■□□□□ 0.28
TRIM41-207ENST00000515223 SSTR3P32745 418 aaPredicted RBP16.8■□□□□ 0.28
TRIM41-207ENST00000515223 GNL1P36915 607 aaPredicted RBP16.8■□□□□ 0.28
TRIM41-207ENST00000515223 RGS4P49798 205 aa16.8■□□□□ 0.28
TRIM41-207ENST00000515223 BFSP2Q13515 415 aa16.8■□□□□ 0.28
TRIM41-207ENST00000515223 KAZALD1Q96I82 304 aa16.8■□□□□ 0.28
TRIM41-207ENST00000515223 DACH2Q96NX9 599 aa16.8■□□□□ 0.28
TRIM41-207ENST00000515223 CYTH2Q99418 400 aa16.8■□□□□ 0.28
TRIM41-207ENST00000515223 SH2D3AQ9BRG2 576 aa16.8■□□□□ 0.28
TRIM41-207ENST00000515223 MXRA8Q9BRK3 442 aa16.8■□□□□ 0.28
TRIM41-207ENST00000515223 ECT2Q9H8V3 914 aa16.8■□□□□ 0.28
TRIM41-207ENST00000515223 MAD2L2Q9UI95 211 aa16.8■□□□□ 0.28
TRIM41-207ENST00000515223 NAGPAQ9UK23 515 aa16.8■□□□□ 0.28
TRIM41-207ENST00000515223 ADGRB1O14514 1584 aa16.8■□□□□ 0.28
TRIM41-207ENST00000515223 GCLCP48506 637 aaPredicted RBP16.8■□□□□ 0.28
TRIM41-207ENST00000515223 ABCE1P61221 599 aaKnown RBP16.8■□□□□ 0.28
TRIM41-207ENST00000515223 TDRD10Q5VZ19 366 aaKnown RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms