RNA–Protein interactions for RNA: ENST00000515066.6

AP3S1-208, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 2

Gene AP3S1, Length 1,670 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-208ENST00000515066 UPP2O95045 317 aa18.04■□□□□ 0.48
AP3S1-208ENST00000515066 PTMAP06454 111 aaKnown RBP18.04■□□□□ 0.48
AP3S1-208ENST00000515066 HNRNPH3P31942 346 aaKnown RBP18.04■□□□□ 0.48
AP3S1-208ENST00000515066 ARHGAP44Q17R89 818 aa18.04■□□□□ 0.48
AP3S1-208ENST00000515066 WDR59Q6PJI9 974 aa18.04■□□□□ 0.48
AP3S1-208ENST00000515066 TMEM139Q8IV31 216 aa18.04■□□□□ 0.48
AP3S1-208ENST00000515066 UBR7Q8N806 425 aa18.04■□□□□ 0.48
AP3S1-208ENST00000515066 OR8K1Q8NGG5 319 aa18.04■□□□□ 0.48
AP3S1-208ENST00000515066 URGCPQ8TCY9 931 aa18.04■□□□□ 0.48
AP3S1-208ENST00000515066 PANX2Q96RD6 677 aa18.04■□□□□ 0.48
AP3S1-208ENST00000515066 BCO2Q9BYV7 579 aa18.04■□□□□ 0.48
AP3S1-208ENST00000515066 KCNF1Q9H3M0 494 aa18.04■□□□□ 0.48
AP3S1-208ENST00000515066 CXXC1Q9P0U4 656 aaPredicted RBP18.04■□□□□ 0.48
AP3S1-208ENST00000515066 KANSL3Q9P2N6 904 aa18.04■□□□□ 0.48
AP3S1-208ENST00000515066 MYO6Q9UM54 1294 aa18.04■□□□□ 0.48
AP3S1-208ENST00000515066 POLIQ9UNA4 740 aa18.04■□□□□ 0.48
AP3S1-208ENST00000515066 GBF1Q92538 1859 aa18.03■□□□□ 0.48
AP3S1-208ENST00000515066 FGBP02675 491 aa18.03■□□□□ 0.48
AP3S1-208ENST00000515066 FECHP22830 423 aa18.03■□□□□ 0.48
AP3S1-208ENST00000515066 ZNF667Q5HYK9 610 aa18.03■□□□□ 0.48
AP3S1-208ENST00000515066 COLGALT2Q8IYK4 626 aa18.03■□□□□ 0.48
AP3S1-208ENST00000515066 ABI1Q8IZP0 508 aa18.03■□□□□ 0.48
AP3S1-208ENST00000515066 ZNF397Q8NF99 534 aaPredicted RBP18.03■□□□□ 0.48
AP3S1-208ENST00000515066 RABGGTAQ92696 567 aa18.03■□□□□ 0.48
AP3S1-208ENST00000515066 SPAG5Q96R06 1193 aa18.03■□□□□ 0.48
AP3S1-208ENST00000515066 RNF216Q9NWF9 866 aaPredicted RBP18.03■□□□□ 0.48
AP3S1-208ENST00000515066 FOXN3O00409 490 aaPredicted RBP18.03■□□□□ 0.48
AP3S1-208ENST00000515066 PODXLO00592 558 aa18.03■□□□□ 0.48
AP3S1-208ENST00000515066 AMHP03971 560 aa18.03■□□□□ 0.48
AP3S1-208ENST00000515066 ACO1P21399 889 aaKnown RBP18.03■□□□□ 0.48
AP3S1-208ENST00000515066 TBXAS1P24557 533 aaPredicted RBP18.03■□□□□ 0.48
AP3S1-208ENST00000515066 RPL9P32969 192 aaKnown RBP18.03■□□□□ 0.48
AP3S1-208ENST00000515066 MFAP3P55082 362 aa18.03■□□□□ 0.48
AP3S1-208ENST00000515066 LILRA4P59901 499 aa18.03■□□□□ 0.48
AP3S1-208ENST00000515066 MYO1EQ12965 1108 aa18.03■□□□□ 0.48
AP3S1-208ENST00000515066 MEA1Q16626 185 aa18.03■□□□□ 0.48
AP3S1-208ENST00000515066 PSRC1Q6PGN9 363 aaPredicted RBP18.03■□□□□ 0.48
AP3S1-208ENST00000515066 CD300LGQ6UXG3 332 aa18.03■□□□□ 0.48
AP3S1-208ENST00000515066 SCARA5Q6ZMJ2 495 aa18.03■□□□□ 0.48
AP3S1-208ENST00000515066 ENOSF1Q7L5Y1 443 aa18.03■□□□□ 0.48
AP3S1-208ENST00000515066 GPIHBP1Q8IV16 184 aa18.03■□□□□ 0.48
AP3S1-208ENST00000515066 ZNF689Q96CS4 500 aaPredicted RBP18.03■□□□□ 0.48
AP3S1-208ENST00000515066 FAXDC2Q96IV6 333 aa18.03■□□□□ 0.48
AP3S1-208ENST00000515066 ZNF560Q96MR9 790 aa18.03■□□□□ 0.48
AP3S1-208ENST00000515066 SDCBP2Q9H190 292 aa18.03■□□□□ 0.48
AP3S1-208ENST00000515066 AIPL1Q9NZN9 384 aa18.03■□□□□ 0.48
AP3S1-208ENST00000515066 NXF1Q9UBU9 619 aaKnown RBP18.03■□□□□ 0.48
AP3S1-208ENST00000515066 DNAJB4Q9UDY4 337 aa18.03■□□□□ 0.48
AP3S1-208ENST00000515066 TBKBP1A7MCY6 615 aa18.02■□□□□ 0.47
AP3S1-208ENST00000515066 F8W810 466 aa18.02■□□□□ 0.47
AP3S1-208ENST00000515066 PNPLA4P41247 253 aa18.02■□□□□ 0.47
AP3S1-208ENST00000515066 AARSP49588 968 aaKnown RBP eCLIP18.02■□□□□ 0.47
AP3S1-208ENST00000515066 TAF6P49848 677 aa18.02■□□□□ 0.47
AP3S1-208ENST00000515066 RSPH1Q8WYR4 309 aa18.02■□□□□ 0.47
AP3S1-208ENST00000515066 SYN2Q92777 582 aaPredicted RBP18.02■□□□□ 0.47
AP3S1-208ENST00000515066 FAM81BQ96LP2 452 aa18.02■□□□□ 0.47
AP3S1-208ENST00000515066 SMYD3Q9H7B4 428 aa18.02■□□□□ 0.47
AP3S1-208ENST00000515066 NRDE2Q9H7Z3 1164 aa18.02■□□□□ 0.47
AP3S1-208ENST00000515066 R3HCC1Q9Y3T6 440 aaKnown RBP18.02■□□□□ 0.47
AP3S1-208ENST00000515066 KPNA7A9QM74 516 aa18.01■□□□□ 0.47
AP3S1-208ENST00000515066 CLSTN1O94985 981 aa18.01■□□□□ 0.47
AP3S1-208ENST00000515066 ITGB1P05556 798 aa18.01■□□□□ 0.47
AP3S1-208ENST00000515066 WEE2P0C1S8 567 aa18.01■□□□□ 0.47
AP3S1-208ENST00000515066 SOX5P35711 763 aa18.01■□□□□ 0.47
AP3S1-208ENST00000515066 CCZ1BP86790 482 aa18.01■□□□□ 0.47
AP3S1-208ENST00000515066 CCZ1P86791 482 aaPredicted RBP18.01■□□□□ 0.47
AP3S1-208ENST00000515066 HGSNATQ68CP4 663 aa18.01■□□□□ 0.47
AP3S1-208ENST00000515066 IRF2BP2Q7Z5L9 587 aa18.01■□□□□ 0.47
AP3S1-208ENST00000515066 FAM71AQ8IYT1 594 aa18.01■□□□□ 0.47
AP3S1-208ENST00000515066 LRRC43Q8N309 656 aa18.01■□□□□ 0.47
AP3S1-208ENST00000515066 JAKMIP2Q96AA8 810 aa18.01■□□□□ 0.47
AP3S1-208ENST00000515066 UROC1Q96N76 676 aa18.01■□□□□ 0.47
AP3S1-208ENST00000515066 ZNF830Q96NB3 372 aaPredicted RBP18.01■□□□□ 0.47
AP3S1-208ENST00000515066 MRPL9Q9BYD2 267 aaKnown RBP18.01■□□□□ 0.47
AP3S1-208ENST00000515066 NUCKS1Q9H1E3 243 aaKnown RBP18.01■□□□□ 0.47
AP3S1-208ENST00000515066 GDAP2Q9NXN4 497 aa18.01■□□□□ 0.47
AP3S1-208ENST00000515066 CNTN6Q9UQ52 1028 aa18.01■□□□□ 0.47
AP3S1-208ENST00000515066 SNX9Q9Y5X1 595 aa18.01■□□□□ 0.47
AP3S1-208ENST00000515066 NLRC5Q86WI3 1866 aa18■□□□□ 0.47
AP3S1-208ENST00000515066 STAT1P42224 750 aa18■□□□□ 0.47
AP3S1-208ENST00000515066 RAP1GAPP47736 663 aa18■□□□□ 0.47
AP3S1-208ENST00000515066 KCNJ6P48051 423 aa18■□□□□ 0.47
AP3S1-208ENST00000515066 CDH8P55286 799 aa18■□□□□ 0.47
AP3S1-208ENST00000515066 RNASELQ05823 741 aaKnown RBP18■□□□□ 0.47
AP3S1-208ENST00000515066 SV2CQ496J9 727 aa18■□□□□ 0.47
AP3S1-208ENST00000515066 PAN2Q504Q3 1202 aaKnown RBP18■□□□□ 0.47
AP3S1-208ENST00000515066 SFMBT2Q5VUG0 894 aa18■□□□□ 0.47
AP3S1-208ENST00000515066 LIMS2Q7Z4I7 341 aa18■□□□□ 0.47
AP3S1-208ENST00000515066 HERVK_113Q902F9 699 aa18■□□□□ 0.47
AP3S1-208ENST00000515066 DDX27Q96GQ7 796 aaKnown RBP18■□□□□ 0.47
AP3S1-208ENST00000515066 CHD7Q9P2D1 2997 aa18■□□□□ 0.47
AP3S1-208ENST00000515066 ZBBXA8MT70 800 aa17.99■□□□□ 0.47
AP3S1-208ENST00000515066 GFPT2O94808 682 aa17.99■□□□□ 0.47
AP3S1-208ENST00000515066 KIF4AO95239 1232 aa17.99■□□□□ 0.47
AP3S1-208ENST00000515066 SOWAHAQ2M3V2 549 aa17.99■□□□□ 0.47
AP3S1-208ENST00000515066 FAM117BQ6P1L5 589 aa17.99■□□□□ 0.47
AP3S1-208ENST00000515066 CHP1Q99653 195 aa17.99■□□□□ 0.47
AP3S1-208ENST00000515066 LBHD1Q9BQE6 289 aaPredicted RBP17.99■□□□□ 0.47
AP3S1-208ENST00000515066 CISHQ9NSE2 258 aa17.99■□□□□ 0.47
AP3S1-208ENST00000515066 ARHGAP20Q9P2F6 1191 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms