RNA–Protein interactions for RNA: ENST00000514439.1

CPNE4-211, Transcript of copine 4, humanhuman

TSL 1 (best)

Gene CPNE4, Length 2,312 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-211ENST00000514439 PTPN22Q9Y2R2 807 aa8.73□□□□□ -1.01
CPNE4-211ENST00000514439 MCM3APO60318 1980 aa8.73□□□□□ -1.01
CPNE4-211ENST00000514439 LOC102724159A0A0B4J2E5 919 aa8.72□□□□□ -1.01
CPNE4-211ENST00000514439 ASB14A6NK59 587 aa8.72□□□□□ -1.01
CPNE4-211ENST00000514439 ACKR2O00590 384 aa8.72□□□□□ -1.01
CPNE4-211ENST00000514439 EIF3HO15372 352 aaKnown RBP eCLIP8.72□□□□□ -1.01
CPNE4-211ENST00000514439 ERLIN2O94905 339 aa8.72□□□□□ -1.01
CPNE4-211ENST00000514439 TMEM191BP0C7N4 346 aa8.72□□□□□ -1.01
CPNE4-211ENST00000514439 CD58P19256 250 aa8.72□□□□□ -1.01
CPNE4-211ENST00000514439 KCNJ1P48048 391 aa8.72□□□□□ -1.01
CPNE4-211ENST00000514439 TFAMQ00059 246 aaKnown RBP8.72□□□□□ -1.01
CPNE4-211ENST00000514439 MBTD1Q05BQ5 628 aa8.72□□□□□ -1.01
CPNE4-211ENST00000514439 PDCLQ13371 301 aa8.72□□□□□ -1.01
CPNE4-211ENST00000514439 PWP2Q15269 919 aaKnown RBP8.72□□□□□ -1.01
CPNE4-211ENST00000514439 SURF1Q15526 300 aa8.72□□□□□ -1.01
CPNE4-211ENST00000514439 SGO2Q562F6 1265 aa8.72□□□□□ -1.01
CPNE4-211ENST00000514439 GJC2Q5T442 439 aaPredicted RBP8.72□□□□□ -1.01
CPNE4-211ENST00000514439 EEF1DP3Q658K8 133 aa8.72□□□□□ -1.01
CPNE4-211ENST00000514439 PLEKHA7Q6IQ23 1121 aa8.72□□□□□ -1.01
CPNE4-211ENST00000514439 EFCAB12Q6NXP0 572 aa8.72□□□□□ -1.01
CPNE4-211ENST00000514439 ARMCX2Q7L311 632 aa8.72□□□□□ -1.01
CPNE4-211ENST00000514439 SHCBP1Q8NEM2 672 aa8.72□□□□□ -1.01
CPNE4-211ENST00000514439 ZNF606Q8WXB4 792 aa8.72□□□□□ -1.01
CPNE4-211ENST00000514439 HERPUD2Q9BSE4 406 aa8.72□□□□□ -1.01
CPNE4-211ENST00000514439 FZD8Q9H461 694 aa8.72□□□□□ -1.01
CPNE4-211ENST00000514439 LRRC19Q9H756 370 aa8.72□□□□□ -1.01
CPNE4-211ENST00000514439 MINDY3Q9H8M7 445 aa8.72□□□□□ -1.01
CPNE4-211ENST00000514439 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.72□□□□□ -1.01
CPNE4-211ENST00000514439 SCINQ9Y6U3 715 aa8.72□□□□□ -1.01
CPNE4-211ENST00000514439 O00370 1275 aa8.72□□□□□ -1.01
CPNE4-211ENST00000514439 PPFIA4O75335 1185 aa8.72□□□□□ -1.01
CPNE4-211ENST00000514439 GJB6O95452 261 aa8.72□□□□□ -1.01
CPNE4-211ENST00000514439 C22orf31O95567 290 aa8.72□□□□□ -1.01
CPNE4-211ENST00000514439 ECEL1O95672 775 aa8.72□□□□□ -1.01
CPNE4-211ENST00000514439 BRD2P25440 801 aaKnown RBP8.72□□□□□ -1.01
CPNE4-211ENST00000514439 GBP1P32455 592 aa8.72□□□□□ -1.01
CPNE4-211ENST00000514439 OSTNP61366 133 aa8.72□□□□□ -1.01
CPNE4-211ENST00000514439 ARHGAP1Q07960 439 aa8.72□□□□□ -1.01
CPNE4-211ENST00000514439 TRPC3Q13507 836 aa8.72□□□□□ -1.01
CPNE4-211ENST00000514439 TMEM132AQ24JP5 1023 aa8.72□□□□□ -1.01
CPNE4-211ENST00000514439 SGSM1Q2NKQ1 1148 aa8.72□□□□□ -1.01
CPNE4-211ENST00000514439 ZNF699Q32M78 642 aa8.72□□□□□ -1.01
CPNE4-211ENST00000514439 ZNF394Q53GI3 561 aa8.72□□□□□ -1.01
CPNE4-211ENST00000514439 EAPPQ56P03 285 aaPredicted RBP8.72□□□□□ -1.01
CPNE4-211ENST00000514439 SPDYCQ5MJ68 293 aa8.72□□□□□ -1.01
CPNE4-211ENST00000514439 LDLRAD1Q5T700 205 aa8.72□□□□□ -1.01
CPNE4-211ENST00000514439 EMC10Q5UCC4 262 aa8.72□□□□□ -1.01
CPNE4-211ENST00000514439 PPP1R2P3Q6NXS1 205 aa8.72□□□□□ -1.01
CPNE4-211ENST00000514439 SCARA5Q6ZMJ2 495 aa8.72□□□□□ -1.01
CPNE4-211ENST00000514439 C1orf54Q8WWF1 131 aa8.72□□□□□ -1.01
CPNE4-211ENST00000514439 SYT17Q9BSW7 474 aa8.72□□□□□ -1.01
CPNE4-211ENST00000514439 XYLT2Q9H1B5 865 aa8.72□□□□□ -1.01
CPNE4-211ENST00000514439 CDT1Q9H211 546 aa8.72□□□□□ -1.01
CPNE4-211ENST00000514439 EPB41L4BQ9H329 900 aa8.72□□□□□ -1.01
CPNE4-211ENST00000514439 RNPEPQ9H4A4 650 aa8.72□□□□□ -1.01
CPNE4-211ENST00000514439 MRPL47Q9HD33 250 aaKnown RBP8.72□□□□□ -1.01
CPNE4-211ENST00000514439 CISHQ9NSE2 258 aa8.72□□□□□ -1.01
CPNE4-211ENST00000514439 ERAP1Q9NZ08 941 aa8.72□□□□□ -1.01
CPNE4-211ENST00000514439 PASKQ96RG2 1323 aa8.72□□□□□ -1.01
CPNE4-211ENST00000514439 TLR3O15455 904 aaKnown RBP8.71□□□□□ -1.01
CPNE4-211ENST00000514439 PSTPIP1O43586 416 aa8.71□□□□□ -1.01
CPNE4-211ENST00000514439 B4GALT4O60513 344 aa8.71□□□□□ -1.01
CPNE4-211ENST00000514439 LGALS2P05162 132 aa8.71□□□□□ -1.01
CPNE4-211ENST00000514439 IQCF3P0C7M6 154 aa8.71□□□□□ -1.01
CPNE4-211ENST00000514439 MMP8P22894 467 aa8.71□□□□□ -1.01
CPNE4-211ENST00000514439 TAS2R40P59535 323 aa8.71□□□□□ -1.01
CPNE4-211ENST00000514439 IGBP1P78318 339 aa8.71□□□□□ -1.01
CPNE4-211ENST00000514439 RUFY4Q6ZNE9 571 aa8.71□□□□□ -1.01
CPNE4-211ENST00000514439 TMEM192Q8IY95 271 aa8.71□□□□□ -1.01
CPNE4-211ENST00000514439 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.71□□□□□ -1.01
CPNE4-211ENST00000514439 ATG4AQ8WYN0 398 aa8.71□□□□□ -1.01
CPNE4-211ENST00000514439 SLCO2A1Q92959 643 aa8.71□□□□□ -1.01
CPNE4-211ENST00000514439 ANKRD36BP1Q96IX9 119 aa8.71□□□□□ -1.01
CPNE4-211ENST00000514439 LRRC4CQ9HCJ2 640 aa8.71□□□□□ -1.01
CPNE4-211ENST00000514439 CHST7Q9NS84 486 aa8.71□□□□□ -1.01
CPNE4-211ENST00000514439 PARP2Q9UGN5 583 aa8.71□□□□□ -1.01
CPNE4-211ENST00000514439 A6NNZ2 444 aa8.71□□□□□ -1.02
CPNE4-211ENST00000514439 ASAP2O43150 1006 aa8.71□□□□□ -1.02
CPNE4-211ENST00000514439 LSM8O95777 96 aaKnown RBP8.71□□□□□ -1.02
CPNE4-211ENST00000514439 TNNC2P02585 160 aa8.71□□□□□ -1.02
CPNE4-211ENST00000514439 WEE2P0C1S8 567 aa8.71□□□□□ -1.02
CPNE4-211ENST00000514439 CXCL8P10145 99 aa8.71□□□□□ -1.02
CPNE4-211ENST00000514439 INSRRP14616 1297 aa8.71□□□□□ -1.02
CPNE4-211ENST00000514439 ADORA2AP29274 412 aa8.71□□□□□ -1.02
CPNE4-211ENST00000514439 HPDP32754 393 aaPredicted RBP8.71□□□□□ -1.02
CPNE4-211ENST00000514439 ASPAP45381 313 aa8.71□□□□□ -1.02
CPNE4-211ENST00000514439 PMS2P54278 862 aa8.71□□□□□ -1.02
CPNE4-211ENST00000514439 IFFO1Q0D2I5 559 aa8.71□□□□□ -1.02
CPNE4-211ENST00000514439 SNX1Q13596 522 aa8.71□□□□□ -1.02
CPNE4-211ENST00000514439 KRT71Q3SY84 523 aa8.71□□□□□ -1.02
CPNE4-211ENST00000514439 TUBB8Q3ZCM7 444 aa8.71□□□□□ -1.02
CPNE4-211ENST00000514439 TAPT1Q6NXT6 567 aa8.71□□□□□ -1.02
CPNE4-211ENST00000514439 CCDC50Q8IVM0 306 aa8.71□□□□□ -1.02
CPNE4-211ENST00000514439 RHOT1Q8IXI2 618 aa8.71□□□□□ -1.02
CPNE4-211ENST00000514439 FEZF2Q8TBJ5 459 aa8.71□□□□□ -1.02
CPNE4-211ENST00000514439 MAIP1Q8WWC4 291 aa8.71□□□□□ -1.02
CPNE4-211ENST00000514439 PABPC3Q9H361 631 aaKnown RBP8.71□□□□□ -1.02
CPNE4-211ENST00000514439 RABEP2Q9H5N1 569 aa8.71□□□□□ -1.02
CPNE4-211ENST00000514439 IFT122Q9HBG6 1241 aa8.71□□□□□ -1.02
CPNE4-211ENST00000514439 PARVAQ9NVD7 372 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 129.8 ms