RNA–Protein interactions for RNA: ENST00000514305.5

USP53-208, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-208ENST00000514305 SLC10A6Q3KNW5 377 aa21.8■■□□□ 1.08
USP53-208ENST00000514305 TTI2Q6NXR4 508 aa21.8■■□□□ 1.08
USP53-208ENST00000514305 ZNF280BQ86YH2 543 aa21.8■■□□□ 1.08
USP53-208ENST00000514305 AUTS2Q8WXX7 1259 aa21.8■■□□□ 1.08
USP53-208ENST00000514305 ADAM7Q9H2U9 754 aa21.8■■□□□ 1.08
USP53-208ENST00000514305 KLK14Q9P0G3 267 aa21.8■■□□□ 1.08
USP53-208ENST00000514305 CNTN3Q9P232 1028 aa21.8■■□□□ 1.08
USP53-208ENST00000514305 MUC6Q6W4X9 2439 aa21.79■■□□□ 1.08
USP53-208ENST00000514305 TTC26A0AVF1 554 aa21.79■■□□□ 1.08
USP53-208ENST00000514305 TMEM221A6NGB7 291 aa21.79■■□□□ 1.08
USP53-208ENST00000514305 M0R296 226 aa21.79■■□□□ 1.08
USP53-208ENST00000514305 FAM189A1O60320 539 aa21.79■■□□□ 1.08
USP53-208ENST00000514305 STX10O60499 249 aa21.79■■□□□ 1.08
USP53-208ENST00000514305 ALDH2P05091 517 aa21.79■■□□□ 1.08
USP53-208ENST00000514305 ADRB2P07550 413 aa21.79■■□□□ 1.08
USP53-208ENST00000514305 TNFSF9P41273 254 aa21.79■■□□□ 1.08
USP53-208ENST00000514305 AP3M2P53677 418 aa21.79■■□□□ 1.08
USP53-208ENST00000514305 ENOX2Q16206 610 aaKnown RBP21.79■■□□□ 1.08
USP53-208ENST00000514305 SEZ6Q53EL9 994 aa21.79■■□□□ 1.08
USP53-208ENST00000514305 XKR4Q5GH76 650 aa21.79■■□□□ 1.08
USP53-208ENST00000514305 CRELD2Q6UXH1 353 aaPredicted RBP21.79■■□□□ 1.08
USP53-208ENST00000514305 ALKAL1Q6UXT8 129 aa21.79■■□□□ 1.08
USP53-208ENST00000514305 FAM186BQ8IYM0 893 aa21.79■■□□□ 1.08
USP53-208ENST00000514305 ENOX1Q8TC92 643 aaKnown RBP21.79■■□□□ 1.08
USP53-208ENST00000514305 RIPOR3Q96MK2 946 aa21.79■■□□□ 1.08
USP53-208ENST00000514305 TMEM175Q9BSA9 504 aa21.79■■□□□ 1.08
USP53-208ENST00000514305 MAGEC2Q9UBF1 373 aaPredicted RBP21.79■■□□□ 1.08
USP53-208ENST00000514305 UBQLN1Q9UMX0 589 aaKnown RBP21.79■■□□□ 1.08
USP53-208ENST00000514305 FAN1Q9Y2M0 1017 aa21.79■■□□□ 1.08
USP53-208ENST00000514305 C2CD2Q9Y426 696 aa21.79■■□□□ 1.08
USP53-208ENST00000514305 TRIM49BA6NDI0 452 aa21.78■■□□□ 1.08
USP53-208ENST00000514305 LACTBL1A8MY62 500 aa21.78■■□□□ 1.08
USP53-208ENST00000514305 POMCP01189 267 aa21.78■■□□□ 1.08
USP53-208ENST00000514305 SP100P23497 879 aaPredicted RBP21.78■■□□□ 1.08
USP53-208ENST00000514305 MTHFRP42898 656 aa21.78■■□□□ 1.08
USP53-208ENST00000514305 PSMD6Q15008 389 aa21.78■■□□□ 1.08
USP53-208ENST00000514305 CCDC40Q4G0X9 1142 aa21.78■■□□□ 1.08
USP53-208ENST00000514305 SPATA1Q5VX52 437 aa21.78■■□□□ 1.08
USP53-208ENST00000514305 BMP8AQ7Z5Y6 402 aa21.78■■□□□ 1.08
USP53-208ENST00000514305 PPFIBP1Q86W92 1011 aa21.78■■□□□ 1.08
USP53-208ENST00000514305 ZC3H3Q8IXZ2 948 aaKnown RBP21.78■■□□□ 1.08
USP53-208ENST00000514305 BEST2Q8NFU1 509 aa21.78■■□□□ 1.08
USP53-208ENST00000514305 BCL7CQ8WUZ0 217 aaPredicted RBP21.78■■□□□ 1.08
USP53-208ENST00000514305 PBXIP1Q96AQ6 731 aa21.78■■□□□ 1.08
USP53-208ENST00000514305 UROC1Q96N76 676 aa21.78■■□□□ 1.08
USP53-208ENST00000514305 BPIFA3Q9BQP9 254 aa21.78■■□□□ 1.08
USP53-208ENST00000514305 SRRTQ9BXP5 876 aaKnown RBP21.78■■□□□ 1.08
USP53-208ENST00000514305 SMIM28A0A1B0GU29 152 aa21.77■■□□□ 1.08
USP53-208ENST00000514305 BECN2A8MW95 431 aa21.77■■□□□ 1.08
USP53-208ENST00000514305 DDHD2O94830 711 aa21.77■■□□□ 1.08
USP53-208ENST00000514305 PRKCSHP14314 528 aaPredicted RBP21.77■■□□□ 1.08
USP53-208ENST00000514305 CYP3A5P20815 502 aa21.77■■□□□ 1.08
USP53-208ENST00000514305 SCNN1GP51170 649 aa21.77■■□□□ 1.08
USP53-208ENST00000514305 PMS1P54277 932 aaKnown RBP21.77■■□□□ 1.08
USP53-208ENST00000514305 TPM4P67936 248 aa21.77■■□□□ 1.08
USP53-208ENST00000514305 CYP24A1Q07973 514 aa21.77■■□□□ 1.08
USP53-208ENST00000514305 TMEM132DQ14C87 1099 aa21.77■■□□□ 1.08
USP53-208ENST00000514305 PTPN21Q16825 1174 aa21.77■■□□□ 1.08
USP53-208ENST00000514305 ANO6Q4KMQ2 910 aa21.77■■□□□ 1.08
USP53-208ENST00000514305 FRMD5Q7Z6J6 570 aa21.77■■□□□ 1.08
USP53-208ENST00000514305 CBWD2Q8IUF1 395 aa21.77■■□□□ 1.08
USP53-208ENST00000514305 SUGP1Q8IWZ8 645 aaKnown RBP21.77■■□□□ 1.08
USP53-208ENST00000514305 TMC2Q8TDI7 906 aa21.77■■□□□ 1.08
USP53-208ENST00000514305 DDX27Q96GQ7 796 aaKnown RBP21.77■■□□□ 1.08
USP53-208ENST00000514305 ANKRD36BP1Q96IX9 119 aa21.77■■□□□ 1.08
USP53-208ENST00000514305 EMILIN2Q9BXX0 1053 aa21.77■■□□□ 1.08
USP53-208ENST00000514305 DNAJC25Q9H1X3 360 aa21.77■■□□□ 1.08
USP53-208ENST00000514305 ARMCX3Q9UH62 379 aaPredicted RBP21.77■■□□□ 1.08
USP53-208ENST00000514305 ZNF318Q5VUA4 2279 aa21.77■■□□□ 1.08
USP53-208ENST00000514305 TNNC2P02585 160 aa21.76■■□□□ 1.07
USP53-208ENST00000514305 TMEM191BP0C7N4 346 aa21.76■■□□□ 1.07
USP53-208ENST00000514305 TNNI1P19237 187 aa21.76■■□□□ 1.07
USP53-208ENST00000514305 PAX3P23760 479 aa21.76■■□□□ 1.07
USP53-208ENST00000514305 AFF1P51825 1210 aaKnown RBP21.76■■□□□ 1.07
USP53-208ENST00000514305 MYL5Q02045 173 aa21.76■■□□□ 1.07
USP53-208ENST00000514305 SIGLEC14Q08ET2 396 aa21.76■■□□□ 1.07
USP53-208ENST00000514305 TUSC3Q13454 348 aa21.76■■□□□ 1.07
USP53-208ENST00000514305 PTPN14Q15678 1187 aa21.76■■□□□ 1.07
USP53-208ENST00000514305 DUOXA2Q1HG44 320 aa21.76■■□□□ 1.07
USP53-208ENST00000514305 ZBTB41Q5SVQ8 909 aa21.76■■□□□ 1.07
USP53-208ENST00000514305 RARS2Q5T160 578 aaKnown RBP21.76■■□□□ 1.07
USP53-208ENST00000514305 WDR49Q8IV35 697 aa21.76■■□□□ 1.07
USP53-208ENST00000514305 ANKRD20A12PQ8NF67 263 aa21.76■■□□□ 1.07
USP53-208ENST00000514305 ZFP42Q96MM3 310 aa21.76■■□□□ 1.07
USP53-208ENST00000514305 DUSP9Q99956 384 aaKnown RBP21.76■■□□□ 1.07
USP53-208ENST00000514305 POMKQ9H5K3 350 aa21.76■■□□□ 1.07
USP53-208ENST00000514305 THAP9Q9H5L6 903 aa21.76■■□□□ 1.07
USP53-208ENST00000514305 NRP1O14786 923 aa21.75■■□□□ 1.07
USP53-208ENST00000514305 B4GALT3O60512 393 aa21.75■■□□□ 1.07
USP53-208ENST00000514305 AKAP3O75969 853 aa21.75■■□□□ 1.07
USP53-208ENST00000514305 TPM2P07951 284 aa21.75■■□□□ 1.07
USP53-208ENST00000514305 EPCAMP16422 314 aa21.75■■□□□ 1.07
USP53-208ENST00000514305 KLRC2P26717 231 aa21.75■■□□□ 1.07
USP53-208ENST00000514305 RPL9P32969 192 aaKnown RBP21.75■■□□□ 1.07
USP53-208ENST00000514305 ZNF165P49910 485 aa21.75■■□□□ 1.07
USP53-208ENST00000514305 VAMP7P51809 220 aa21.75■■□□□ 1.07
USP53-208ENST00000514305 ATAT1Q5SQI0 421 aa21.75■■□□□ 1.07
USP53-208ENST00000514305 LRSAM1Q6UWE0 723 aa21.75■■□□□ 1.07
USP53-208ENST00000514305 GZF1Q9H116 711 aaPredicted RBP21.75■■□□□ 1.07
USP53-208ENST00000514305 MRPL17Q9NRX2 175 aaKnown RBP21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms