RNA–Protein interactions for RNA: ENST00000513988.1

CLDND1-229, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-229ENST00000513988 BAZ2BQ9UIF8 2168 aaKnown RBP8.52□□□□□ -1.04
CLDND1-229ENST00000513988 A0A087WZ62 844 aa8.52□□□□□ -1.05
CLDND1-229ENST00000513988 PNMA6FA0A0J9YX94 578 aa8.52□□□□□ -1.05
CLDND1-229ENST00000513988 BLACEA4D250 179 aa8.52□□□□□ -1.05
CLDND1-229ENST00000513988 DDX39AO00148 427 aaKnown RBP8.52□□□□□ -1.05
CLDND1-229ENST00000513988 MOSPD3O75425 235 aa8.52□□□□□ -1.05
CLDND1-229ENST00000513988 CCNE2O96020 404 aa8.52□□□□□ -1.05
CLDND1-229ENST00000513988 CDC42EP1Q00587 391 aa8.52□□□□□ -1.05
CLDND1-229ENST00000513988 PSMD2Q13200 908 aa8.52□□□□□ -1.05
CLDND1-229ENST00000513988 HSP90AA2PQ14568 343 aaPredicted RBP8.52□□□□□ -1.05
CLDND1-229ENST00000513988 TEAD2Q15562 447 aa8.52□□□□□ -1.05
CLDND1-229ENST00000513988 TMPRSS12Q86WS5 348 aa8.52□□□□□ -1.05
CLDND1-229ENST00000513988 IQCA1Q86XH1 822 aa8.52□□□□□ -1.05
CLDND1-229ENST00000513988 GPIHBP1Q8IV16 184 aa8.52□□□□□ -1.05
CLDND1-229ENST00000513988 MDGA1Q8NFP4 955 aa8.52□□□□□ -1.05
CLDND1-229ENST00000513988 OLIG1Q8TAK6 271 aa8.52□□□□□ -1.05
CLDND1-229ENST00000513988 HASPINQ8TF76 798 aa8.52□□□□□ -1.05
CLDND1-229ENST00000513988 ESR2Q92731 530 aa8.52□□□□□ -1.05
CLDND1-229ENST00000513988 FDXACB1Q9BRP7 624 aaPredicted RBP8.52□□□□□ -1.05
CLDND1-229ENST00000513988 CDY1Q9Y6F8 540 aa8.52□□□□□ -1.05
CLDND1-229ENST00000513988 MYH9P35579 1960 aaKnown RBP8.52□□□□□ -1.05
CLDND1-229ENST00000513988 NBASA2RRP1 2371 aa8.51□□□□□ -1.05
CLDND1-229ENST00000513988 A0A1B0GTL3 188 aa8.51□□□□□ -1.05
CLDND1-229ENST00000513988 PIK3CDO00329 1044 aa8.51□□□□□ -1.05
CLDND1-229ENST00000513988 MEIS2O14770 477 aa8.51□□□□□ -1.05
CLDND1-229ENST00000513988 AP5Z1O43299 807 aa8.51□□□□□ -1.05
CLDND1-229ENST00000513988 RAB11FIP3O75154 756 aa8.51□□□□□ -1.05
CLDND1-229ENST00000513988 ALDH1A2O94788 518 aa8.51□□□□□ -1.05
CLDND1-229ENST00000513988 PCP11498 1178 aaKnown RBP8.51□□□□□ -1.05
CLDND1-229ENST00000513988 JUPP14923 745 aa8.51□□□□□ -1.05
CLDND1-229ENST00000513988 ACTN2P35609 894 aa8.51□□□□□ -1.05
CLDND1-229ENST00000513988 HNF1BP35680 557 aa8.51□□□□□ -1.05
CLDND1-229ENST00000513988 NFKB2Q00653 900 aa8.51□□□□□ -1.05
CLDND1-229ENST00000513988 AMPD2Q01433 879 aa8.51□□□□□ -1.05
CLDND1-229ENST00000513988 ITGB3BPQ13352 177 aaPredicted RBP8.51□□□□□ -1.05
CLDND1-229ENST00000513988 BYSLQ13895 437 aaKnown RBP8.51□□□□□ -1.05
CLDND1-229ENST00000513988 PLEKHG6Q3KR16 790 aa8.51□□□□□ -1.05
CLDND1-229ENST00000513988 ZMYM1Q5SVZ6 1142 aa8.51□□□□□ -1.05
CLDND1-229ENST00000513988 SWT1Q5T5J6 900 aaKnown RBP8.51□□□□□ -1.05
CLDND1-229ENST00000513988 VPS53Q5VIR6 699 aa8.51□□□□□ -1.05
CLDND1-229ENST00000513988 DHRS13Q6UX07 377 aa8.51□□□□□ -1.05
CLDND1-229ENST00000513988 ARID3BQ8IVW6 561 aaPredicted RBP8.51□□□□□ -1.05
CLDND1-229ENST00000513988 LEMD2Q8NC56 503 aa8.51□□□□□ -1.05
CLDND1-229ENST00000513988 CNNM3Q8NE01 707 aa8.51□□□□□ -1.05
CLDND1-229ENST00000513988 BAHD1Q8TBE0 780 aaPredicted RBP8.51□□□□□ -1.05
CLDND1-229ENST00000513988 RHBDD1Q8TEB9 315 aa8.51□□□□□ -1.05
CLDND1-229ENST00000513988 EXOC4Q96A65 974 aa8.51□□□□□ -1.05
CLDND1-229ENST00000513988 ZNF512Q96ME7 567 aaPredicted RBP8.51□□□□□ -1.05
CLDND1-229ENST00000513988 ZFP42Q96MM3 310 aa8.51□□□□□ -1.05
CLDND1-229ENST00000513988 LRRC3BQ96PB8 259 aa8.51□□□□□ -1.05
CLDND1-229ENST00000513988 CSRNP2Q9H175 543 aa8.51□□□□□ -1.05
CLDND1-229ENST00000513988 ASAH2Q9NR71 780 aa8.51□□□□□ -1.05
CLDND1-229ENST00000513988 ECHDC1Q9NTX5 307 aa8.51□□□□□ -1.05
CLDND1-229ENST00000513988 AGPAT5Q9NUQ2 364 aa8.51□□□□□ -1.05
CLDND1-229ENST00000513988 MIOSQ9NXC5 875 aa8.51□□□□□ -1.05
CLDND1-229ENST00000513988 HELZP42694 1942 aaKnown RBP8.5□□□□□ -1.05
CLDND1-229ENST00000513988 CLEC18AA5D8T8 446 aa8.5□□□□□ -1.05
CLDND1-229ENST00000513988 SUV39H1O43463 412 aa8.5□□□□□ -1.05
CLDND1-229ENST00000513988 NDUFV2P19404 249 aa8.5□□□□□ -1.05
CLDND1-229ENST00000513988 HAND2P61296 217 aa8.5□□□□□ -1.05
CLDND1-229ENST00000513988 ELAVL2Q12926 359 aaKnown RBP8.5□□□□□ -1.05
CLDND1-229ENST00000513988 RTP5Q14D33 572 aa8.5□□□□□ -1.05
CLDND1-229ENST00000513988 ALX1Q15699 326 aa8.5□□□□□ -1.05
CLDND1-229ENST00000513988 CLEC18BQ6UXF7 455 aa8.5□□□□□ -1.05
CLDND1-229ENST00000513988 ITPRIPQ8IWB1 547 aa8.5□□□□□ -1.05
CLDND1-229ENST00000513988 DEFB119Q8N690 84 aa8.5□□□□□ -1.05
CLDND1-229ENST00000513988 FRMD1Q8N878 549 aa8.5□□□□□ -1.05
CLDND1-229ENST00000513988 CLEC18CQ8NCF0 446 aa8.5□□□□□ -1.05
CLDND1-229ENST00000513988 NAF1Q96HR8 494 aaKnown RBP8.5□□□□□ -1.05
CLDND1-229ENST00000513988 FAM167AQ96KS9 214 aa8.5□□□□□ -1.05
CLDND1-229ENST00000513988 MXRA8Q9BRK3 442 aa8.5□□□□□ -1.05
CLDND1-229ENST00000513988 NRSN2Q9GZP1 204 aa8.5□□□□□ -1.05
CLDND1-229ENST00000513988 ZNF768Q9H5H4 540 aaKnown RBP8.5□□□□□ -1.05
CLDND1-229ENST00000513988 FBRSL1Q9HCM7 1045 aaKnown RBP8.5□□□□□ -1.05
CLDND1-229ENST00000513988 THG1LQ9NWX6 298 aaKnown RBP8.5□□□□□ -1.05
CLDND1-229ENST00000513988 MTRRQ9UBK8 725 aa8.5□□□□□ -1.05
CLDND1-229ENST00000513988 TPCN1Q9ULQ1 816 aa8.5□□□□□ -1.05
CLDND1-229ENST00000513988 CABIN1Q9Y6J0 2220 aa8.5□□□□□ -1.05
CLDND1-229ENST00000513988 OTOGQ6ZRI0 2925 aa8.5□□□□□ -1.05
CLDND1-229ENST00000513988 NAV3Q8IVL0 2385 aa8.49□□□□□ -1.05
CLDND1-229ENST00000513988 PTPRDP23468 1912 aa8.49□□□□□ -1.05
CLDND1-229ENST00000513988 A0A1W2PQD8 194 aa8.49□□□□□ -1.05
CLDND1-229ENST00000513988 BRINP1O60477 761 aa8.49□□□□□ -1.05
CLDND1-229ENST00000513988 U2AF2P26368 475 aaKnown RBP eCLIP8.49□□□□□ -1.051e-6■□□□□ 11.2
CLDND1-229ENST00000513988 GALK1P51570 392 aa8.49□□□□□ -1.05
CLDND1-229ENST00000513988 RPL6Q02878 288 aaKnown RBP8.49□□□□□ -1.05
CLDND1-229ENST00000513988 TLE1Q04724 770 aa8.49□□□□□ -1.05
CLDND1-229ENST00000513988 VAC14Q08AM6 782 aa8.49□□□□□ -1.05
CLDND1-229ENST00000513988 GRIK2Q13002 908 aa8.49□□□□□ -1.05
CLDND1-229ENST00000513988 RUNX3Q13761 415 aa8.49□□□□□ -1.05
CLDND1-229ENST00000513988 UBXN11Q5T124 520 aa8.49□□□□□ -1.05
CLDND1-229ENST00000513988 ZNF410Q86VK4 478 aa8.49□□□□□ -1.05
CLDND1-229ENST00000513988 ERICH1Q86X53 443 aa8.49□□□□□ -1.05
CLDND1-229ENST00000513988 FAM26EQ8N5C1 309 aa8.49□□□□□ -1.05
CLDND1-229ENST00000513988 ENAHQ8N8S7 591 aaPredicted RBP8.49□□□□□ -1.05
CLDND1-229ENST00000513988 SMG8Q8ND04 991 aaKnown RBP8.49□□□□□ -1.05
CLDND1-229ENST00000513988 ZNF248Q8NDW4 579 aa8.49□□□□□ -1.05
CLDND1-229ENST00000513988 SHKBP1Q8TBC3 707 aa8.49□□□□□ -1.05
CLDND1-229ENST00000513988 BPIFB1Q8TDL5 484 aa8.49□□□□□ -1.05
CLDND1-229ENST00000513988 PIBF1Q8WXW3 757 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms