RNA–Protein interactions for RNA: ENST00000513761.5

CLCN3-209, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCN3, Length 6,692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-209ENST00000513761 TAS2R14Q9NYV8 317 aa8.16□□□□□ -1.1
CLCN3-209ENST00000513761 MCF2P10911 925 aa8.16□□□□□ -1.1
CLCN3-209ENST00000513761 CYP11B1P15538 503 aa8.16□□□□□ -1.1
CLCN3-209ENST00000513761 RRM1P23921 792 aa8.16□□□□□ -1.1
CLCN3-209ENST00000513761 KCNA1Q09470 495 aa8.16□□□□□ -1.1
CLCN3-209ENST00000513761 TFDP1Q14186 410 aa8.16□□□□□ -1.1
CLCN3-209ENST00000513761 FAM71DQ8N9W8 422 aa8.16□□□□□ -1.1
CLCN3-209ENST00000513761 ATXN2LQ8WWM7 1075 aaKnown RBP8.16□□□□□ -1.1
CLCN3-209ENST00000513761 SNUPNO95149 360 aaKnown RBP8.15□□□□□ -1.1
CLCN3-209ENST00000513761 CASP5P51878 434 aa8.15□□□□□ -1.1
CLCN3-209ENST00000513761 KRT76Q01546 638 aa8.15□□□□□ -1.1
CLCN3-209ENST00000513761 CNGA2Q16280 664 aa8.15□□□□□ -1.1
CLCN3-209ENST00000513761 C16orf87Q6PH81 154 aa8.15□□□□□ -1.1
CLCN3-209ENST00000513761 BZW1Q7L1Q6 419 aaKnown RBP8.15□□□□□ -1.1
CLCN3-209ENST00000513761 NKX2-3Q8TAU0 364 aa8.15□□□□□ -1.1
CLCN3-209ENST00000513761 SPIRE2Q8WWL2 714 aa8.15□□□□□ -1.1
CLCN3-209ENST00000513761 GPRC5CQ9NQ84 441 aa8.15□□□□□ -1.1
CLCN3-209ENST00000513761 KLHL8Q9P2G9 620 aaPredicted RBP8.15□□□□□ -1.1
CLCN3-209ENST00000513761 PRR12Q9ULL5 1215 aa8.15□□□□□ -1.1
CLCN3-209ENST00000513761 SUPT3HO75486 399 aa8.15□□□□□ -1.1
CLCN3-209ENST00000513761 EEF1DP29692 281 aaKnown RBP8.15□□□□□ -1.1
CLCN3-209ENST00000513761 DSG1Q02413 1049 aa8.15□□□□□ -1.1
CLCN3-209ENST00000513761 E2F7Q96AV8 911 aa8.15□□□□□ -1.1
CLCN3-209ENST00000513761 CDHR1Q96JP9 859 aa8.15□□□□□ -1.1
CLCN3-209ENST00000513761 FOXP3Q9BZS1 431 aa8.15□□□□□ -1.1
CLCN3-209ENST00000513761 AS3MTQ9HBK9 375 aa8.15□□□□□ -1.1
CLCN3-209ENST00000513761 TMEM8AQ9HCN3 771 aa8.15□□□□□ -1.1
CLCN3-209ENST00000513761 TRIM49D1C9J1S8 452 aa8.15□□□□□ -1.1
CLCN3-209ENST00000513761 AIM2O14862 343 aa8.15□□□□□ -1.1
CLCN3-209ENST00000513761 HLA-DRAP01903 254 aa8.15□□□□□ -1.1
CLCN3-209ENST00000513761 TCN1P20061 433 aaPredicted RBP8.15□□□□□ -1.1
CLCN3-209ENST00000513761 PTPN4P29074 926 aa8.15□□□□□ -1.1
CLCN3-209ENST00000513761 MROH9Q5TGP6 573 aa8.15□□□□□ -1.1
CLCN3-209ENST00000513761 GRAMD4Q6IC98 578 aa8.15□□□□□ -1.1
CLCN3-209ENST00000513761 RSPH3Q86UC2 560 aa8.15□□□□□ -1.1
CLCN3-209ENST00000513761 HIC2Q96JB3 615 aa8.15□□□□□ -1.1
CLCN3-209ENST00000513761 MCM8Q9UJA3 840 aa8.15□□□□□ -1.1
CLCN3-209ENST00000513761 RNF103-CHMP3A0A140T963 221 aa8.15□□□□□ -1.1
CLCN3-209ENST00000513761 KPNA7A9QM74 516 aa8.15□□□□□ -1.1
CLCN3-209ENST00000513761 SEC24DO94855 1032 aaPredicted RBP8.15□□□□□ -1.1
CLCN3-209ENST00000513761 ENO3P13929 434 aaPredicted RBP8.15□□□□□ -1.1
CLCN3-209ENST00000513761 RFC5P40937 340 aa8.15□□□□□ -1.1
CLCN3-209ENST00000513761 DDR1Q08345 913 aa8.15□□□□□ -1.1
CLCN3-209ENST00000513761 TNFAIP1Q13829 316 aa8.15□□□□□ -1.1
CLCN3-209ENST00000513761 KIF19Q2TAC6 998 aa8.15□□□□□ -1.1
CLCN3-209ENST00000513761 TMEM119Q4V9L6 283 aa8.15□□□□□ -1.1
CLCN3-209ENST00000513761 ZCWPW2Q504Y3 356 aa8.15□□□□□ -1.1
CLCN3-209ENST00000513761 FAXCQ5TGI0 409 aa8.15□□□□□ -1.1
CLCN3-209ENST00000513761 SNX30Q5VWJ9 437 aa8.15□□□□□ -1.1
CLCN3-209ENST00000513761 HEATR6Q6AI08 1181 aaKnown RBP8.15□□□□□ -1.1
CLCN3-209ENST00000513761 NDUFAF2Q8N183 169 aa8.15□□□□□ -1.1
CLCN3-209ENST00000513761 SLC25A41Q8N5S1 370 aa8.15□□□□□ -1.1
CLCN3-209ENST00000513761 SPATA18Q8TC71 538 aa8.15□□□□□ -1.1
CLCN3-209ENST00000513761 SNRNP27Q8WVK2 155 aaKnown RBP8.15□□□□□ -1.1
CLCN3-209ENST00000513761 MOV10L1Q9BXT6 1211 aaKnown RBP8.15□□□□□ -1.1
CLCN3-209ENST00000513761 GGA2Q9UJY4 613 aa8.15□□□□□ -1.1
CLCN3-209ENST00000513761 GPR75-ASB3A0A0A6YYF3 556 aa8.15□□□□□ -1.11
CLCN3-209ENST00000513761 ABCD1P33897 745 aa8.15□□□□□ -1.11
CLCN3-209ENST00000513761 CACNA2D1P54289 1103 aa8.15□□□□□ -1.11
CLCN3-209ENST00000513761 CYP4A22Q5TCH4 519 aa8.15□□□□□ -1.11
CLCN3-209ENST00000513761 PCNX4Q63HM2 1172 aa8.15□□□□□ -1.11
CLCN3-209ENST00000513761 IZUMO2Q6UXV1 221 aa8.15□□□□□ -1.11
CLCN3-209ENST00000513761 APTXQ7Z2E3 356 aaKnown RBP8.15□□□□□ -1.11
CLCN3-209ENST00000513761 TBC1D16Q8TBP0 767 aa8.15□□□□□ -1.11
CLCN3-209ENST00000513761 POLR3CQ9BUI4 534 aaPredicted RBP8.15□□□□□ -1.11
CLCN3-209ENST00000513761 DHX35Q9H5Z1 703 aaKnown RBP8.15□□□□□ -1.11
CLCN3-209ENST00000513761 PDP2Q9P2J9 529 aa8.15□□□□□ -1.11
CLCN3-209ENST00000513761 MID2Q9UJV3 735 aa8.15□□□□□ -1.11
CLCN3-209ENST00000513761 GNGT2O14610 69 aa8.14□□□□□ -1.11
CLCN3-209ENST00000513761 RBP3P10745 1247 aa8.14□□□□□ -1.11
CLCN3-209ENST00000513761 HNRNPH3P31942 346 aaKnown RBP8.14□□□□□ -1.11
CLCN3-209ENST00000513761 AUHQ13825 339 aaKnown RBP8.14□□□□□ -1.11
CLCN3-209ENST00000513761 CDC42EP5Q6NZY7 148 aa8.14□□□□□ -1.11
CLCN3-209ENST00000513761 TRIM67Q6ZTA4 783 aa8.14□□□□□ -1.11
CLCN3-209ENST00000513761 TMEM121Q9BTD3 319 aa8.14□□□□□ -1.11
CLCN3-209ENST00000513761 FAM96AQ9H5X1 160 aa8.14□□□□□ -1.11
CLCN3-209ENST00000513761 NINJ2Q9NZG7 142 aa8.14□□□□□ -1.11
CLCN3-209ENST00000513761 DNM1LO00429 736 aa8.14□□□□□ -1.11
CLCN3-209ENST00000513761 MAP3K6O95382 1288 aa8.14□□□□□ -1.11
CLCN3-209ENST00000513761 SDC4P31431 198 aa8.14□□□□□ -1.11
CLCN3-209ENST00000513761 LAMB3Q13751 1172 aa8.14□□□□□ -1.11
CLCN3-209ENST00000513761 ZNF568Q3ZCX4 644 aa8.14□□□□□ -1.11
CLCN3-209ENST00000513761 FBXO36Q8NEA4 188 aa8.14□□□□□ -1.11
CLCN3-209ENST00000513761 OR6B3Q8NGW1 331 aa8.14□□□□□ -1.11
CLCN3-209ENST00000513761 CYP2W1Q8TAV3 490 aa8.14□□□□□ -1.11
CLCN3-209ENST00000513761 FEZF2Q8TBJ5 459 aa8.14□□□□□ -1.11
CLCN3-209ENST00000513761 TMEM143Q96AN5 459 aa8.14□□□□□ -1.11
CLCN3-209ENST00000513761 TMEM120AQ9BXJ8 343 aa8.14□□□□□ -1.11
CLCN3-209ENST00000513761 TOPORSQ9NS56 1045 aaPredicted RBP8.14□□□□□ -1.11
CLCN3-209ENST00000513761 TRPC5Q9UL62 973 aaPredicted RBP8.14□□□□□ -1.11
CLCN3-209ENST00000513761 GRAP2O75791 330 aa8.14□□□□□ -1.11
CLCN3-209ENST00000513761 AP1G2O75843 785 aa8.14□□□□□ -1.11
CLCN3-209ENST00000513761 DGKIO75912 1065 aa8.14□□□□□ -1.11
CLCN3-209ENST00000513761 KRT16P08779 473 aa8.14□□□□□ -1.11
CLCN3-209ENST00000513761 MARCKSL1P49006 195 aa8.14□□□□□ -1.11
CLCN3-209ENST00000513761 PRAMEP78395 509 aa8.14□□□□□ -1.11
CLCN3-209ENST00000513761 PDCD2Q16342 344 aaPredicted RBP8.14□□□□□ -1.11
CLCN3-209ENST00000513761 C3orf67Q6ZVT6 689 aa8.14□□□□□ -1.11
CLCN3-209ENST00000513761 ARHGEF19Q8IW93 802 aa8.14□□□□□ -1.11
CLCN3-209ENST00000513761 C1orf131Q8NDD1 294 aaKnown RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms