RNA–Protein interactions for RNA: ENST00000513756.5

PTPN20-229, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-229ENST00000513756 SH3PXD2AQ5TCZ1 1133 aa13.23□□□□□ -0.29
PTPN20-229ENST00000513756 ZNF280DQ6N043 979 aa13.23□□□□□ -0.29
PTPN20-229ENST00000513756 PIK3AP1Q6ZUJ8 805 aa13.23□□□□□ -0.29
PTPN20-229ENST00000513756 ARID3BQ8IVW6 561 aaPredicted RBP13.23□□□□□ -0.29
PTPN20-229ENST00000513756 APPL2Q8NEU8 664 aa13.23□□□□□ -0.29
PTPN20-229ENST00000513756 DEPTORQ8TB45 409 aa13.23□□□□□ -0.29
PTPN20-229ENST00000513756 PIGOQ8TEQ8 1089 aa13.23□□□□□ -0.29
PTPN20-229ENST00000513756 ZCCHC14Q8WYQ9 949 aaKnown RBP13.23□□□□□ -0.29
PTPN20-229ENST00000513756 GATA6Q92908 595 aa13.23□□□□□ -0.29
PTPN20-229ENST00000513756 RSPRY1Q96DX4 576 aa13.23□□□□□ -0.29
PTPN20-229ENST00000513756 TMEM121BQ9BXQ6 578 aaPredicted RBP13.23□□□□□ -0.29
PTPN20-229ENST00000513756 GTSE1Q9NYZ3 720 aa13.23□□□□□ -0.29
PTPN20-229ENST00000513756 KCNJ14Q9UNX9 436 aa13.23□□□□□ -0.29
PTPN20-229ENST00000513756 NUB1Q9Y5A7 615 aa13.23□□□□□ -0.29
PTPN20-229ENST00000513756 DMXL2Q8TDJ6 3036 aa13.23□□□□□ -0.29
PTPN20-229ENST00000513756 A0A1W2PRU2 124 aa13.22□□□□□ -0.29
PTPN20-229ENST00000513756 FGF19O95750 216 aa13.22□□□□□ -0.29
PTPN20-229ENST00000513756 CAVIN2O95810 425 aa13.22□□□□□ -0.29
PTPN20-229ENST00000513756 CPB1P15086 417 aa13.22□□□□□ -0.29
PTPN20-229ENST00000513756 SPINK2P20155 84 aa13.22□□□□□ -0.29
PTPN20-229ENST00000513756 RPL9P32969 192 aaKnown RBP13.22□□□□□ -0.29
PTPN20-229ENST00000513756 EPHB3P54753 998 aa13.22□□□□□ -0.29
PTPN20-229ENST00000513756 GRSF1Q12849 480 aaKnown RBP eCLIP13.22□□□□□ -0.29
PTPN20-229ENST00000513756 KARSQ15046 597 aaKnown RBP13.22□□□□□ -0.29
PTPN20-229ENST00000513756 PPP2R5AQ15172 486 aa13.22□□□□□ -0.29
PTPN20-229ENST00000513756 EEF1DP3Q658K8 133 aa13.22□□□□□ -0.29
PTPN20-229ENST00000513756 TMEM209Q96SK2 561 aa13.22□□□□□ -0.29
PTPN20-229ENST00000513756 CCDC94Q9BW85 323 aaPredicted RBP13.22□□□□□ -0.29
PTPN20-229ENST00000513756 SCNM1Q9BWG6 230 aa13.22□□□□□ -0.29
PTPN20-229ENST00000513756 CCDC113Q9H0I3 377 aa13.22□□□□□ -0.29
PTPN20-229ENST00000513756 THG1LQ9NWX6 298 aaKnown RBP13.22□□□□□ -0.29
PTPN20-229ENST00000513756 AKAP13Q12802 2813 aa13.21□□□□□ -0.29
PTPN20-229ENST00000513756 CSRP1P21291 193 aaKnown RBP13.21□□□□□ -0.29
PTPN20-229ENST00000513756 MARCKSP29966 332 aaPredicted RBP13.21□□□□□ -0.29
PTPN20-229ENST00000513756 HOXC13P31276 330 aa13.21□□□□□ -0.29
PTPN20-229ENST00000513756 NAMPTP43490 491 aa13.21□□□□□ -0.29
PTPN20-229ENST00000513756 ALDH1A3P47895 512 aa13.21□□□□□ -0.29
PTPN20-229ENST00000513756 EFNA5P52803 228 aa13.21□□□□□ -0.29
PTPN20-229ENST00000513756 CREB5Q02930 508 aa13.21□□□□□ -0.29
PTPN20-229ENST00000513756 CALCRLQ16602 461 aa13.21□□□□□ -0.29
PTPN20-229ENST00000513756 ITPRIPL2Q3MIP1 535 aa13.21□□□□□ -0.29
PTPN20-229ENST00000513756 ARHGAP15Q53QZ3 475 aa13.21□□□□□ -0.29
PTPN20-229ENST00000513756 BMP2KLQ5H9B9 411 aa13.21□□□□□ -0.29
PTPN20-229ENST00000513756 ATF7IP2Q5U623 682 aa13.21□□□□□ -0.29
PTPN20-229ENST00000513756 TCEAL6Q6IPX3 200 aa13.21□□□□□ -0.29
PTPN20-229ENST00000513756 TCEAL3Q969E4 200 aa13.21□□□□□ -0.29
PTPN20-229ENST00000513756 ZFYVE19Q96K21 471 aa13.21□□□□□ -0.29
PTPN20-229ENST00000513756 SUSD3Q96L08 255 aa13.21□□□□□ -0.29
PTPN20-229ENST00000513756 AIFM3Q96NN9 605 aa13.21□□□□□ -0.29
PTPN20-229ENST00000513756 OXCT2Q9BYC2 517 aaPredicted RBP13.21□□□□□ -0.29
PTPN20-229ENST00000513756 DUSP15Q9H1R2 295 aaPredicted RBP13.21□□□□□ -0.29
PTPN20-229ENST00000513756 TMEM9BQ9NQ34 198 aa13.21□□□□□ -0.29
PTPN20-229ENST00000513756 USP20Q9Y2K6 914 aa13.21□□□□□ -0.29
PTPN20-229ENST00000513756 YIPF1Q9Y548 306 aa13.21□□□□□ -0.29
PTPN20-229ENST00000513756 SNX14Q9Y5W7 946 aa13.21□□□□□ -0.29
PTPN20-229ENST00000513756 TRIP11Q15643 1979 aa13.21□□□□□ -0.29
PTPN20-229ENST00000513756 BCLAF3A2AJT9 711 aaKnown RBP13.2□□□□□ -0.3
PTPN20-229ENST00000513756 MCM4P33991 863 aa13.2□□□□□ -0.3
PTPN20-229ENST00000513756 GRM5P41594 1212 aa13.2□□□□□ -0.3
PTPN20-229ENST00000513756 AMPD2Q01433 879 aa13.2□□□□□ -0.3
PTPN20-229ENST00000513756 SOX4Q06945 474 aaPredicted RBP13.2□□□□□ -0.3
PTPN20-229ENST00000513756 XKR4Q5GH76 650 aa13.2□□□□□ -0.3
PTPN20-229ENST00000513756 ALKAL1Q6UXT8 129 aa13.2□□□□□ -0.3
PTPN20-229ENST00000513756 RNF19BQ6ZMZ0 732 aa13.2□□□□□ -0.3
PTPN20-229ENST00000513756 TMC8Q8IU68 726 aa13.2□□□□□ -0.3
PTPN20-229ENST00000513756 GPIHBP1Q8IV16 184 aa13.2□□□□□ -0.3
PTPN20-229ENST00000513756 BPIFB1Q8TDL5 484 aa13.2□□□□□ -0.3
PTPN20-229ENST00000513756 DDX12PQ92771 950 aa13.2□□□□□ -0.3
PTPN20-229ENST00000513756 EXOC4Q96A65 974 aa13.2□□□□□ -0.3
PTPN20-229ENST00000513756 COL26A1Q96A83 441 aa13.2□□□□□ -0.3
PTPN20-229ENST00000513756 KIF12Q96FN5 646 aa13.2□□□□□ -0.3
PTPN20-229ENST00000513756 ZNF274Q96GC6 653 aaPredicted RBP13.2□□□□□ -0.3
PTPN20-229ENST00000513756 IFT74Q96LB3 600 aa13.2□□□□□ -0.3
PTPN20-229ENST00000513756 LRRC3Q9BY71 257 aa13.2□□□□□ -0.3
PTPN20-229ENST00000513756 TTC12Q9H892 705 aaPredicted RBP13.2□□□□□ -0.3
PTPN20-229ENST00000513756 ASB3Q9Y575 518 aa13.2□□□□□ -0.3
PTPN20-229ENST00000513756 A0A087WWV3 80 aa13.19□□□□□ -0.3
PTPN20-229ENST00000513756 KHNYNO15037 678 aaKnown RBP13.19□□□□□ -0.3
PTPN20-229ENST00000513756 CDKL5O76039 1030 aa13.19□□□□□ -0.3
PTPN20-229ENST00000513756 KCNE1P15382 129 aa13.19□□□□□ -0.3
PTPN20-229ENST00000513756 WEE1P30291 646 aa13.19□□□□□ -0.3
PTPN20-229ENST00000513756 HSPA4P34932 840 aa13.19□□□□□ -0.3
PTPN20-229ENST00000513756 TNK2Q07912 1038 aa13.19□□□□□ -0.3
PTPN20-229ENST00000513756 TMEM196Q5HYL7 178 aa13.19□□□□□ -0.3
PTPN20-229ENST00000513756 NT5DC1Q5TFE4 455 aa13.19□□□□□ -0.3
PTPN20-229ENST00000513756 PKN3Q6P5Z2 889 aa13.19□□□□□ -0.3
PTPN20-229ENST00000513756 C11orf74Q86VG3 221 aa13.19□□□□□ -0.3
PTPN20-229ENST00000513756 BEST2Q8NFU1 509 aa13.19□□□□□ -0.3
PTPN20-229ENST00000513756 BSNDQ8WZ55 320 aa13.19□□□□□ -0.3
PTPN20-229ENST00000513756 TBC1D32Q96NH3 1257 aa13.19□□□□□ -0.3
PTPN20-229ENST00000513756 LRRC3BQ96PB8 259 aa13.19□□□□□ -0.3
PTPN20-229ENST00000513756 NACC1Q96RE7 527 aa13.19□□□□□ -0.3
PTPN20-229ENST00000513756 ATXN3LQ9H3M9 355 aa13.19□□□□□ -0.3
PTPN20-229ENST00000513756 PCDHB8Q9UN66 801 aa13.19□□□□□ -0.3
PTPN20-229ENST00000513756 TNFSF13BQ9Y275 285 aa13.19□□□□□ -0.3
PTPN20-229ENST00000513756 NEUROG3Q9Y4Z2 214 aa13.19□□□□□ -0.3
PTPN20-229ENST00000513756 ITPR1Q14643 2758 aa13.18□□□□□ -0.3
PTPN20-229ENST00000513756 LNP1A1A4G5 178 aa13.18□□□□□ -0.3
PTPN20-229ENST00000513756 TAF4O00268 1085 aa13.18□□□□□ -0.3
PTPN20-229ENST00000513756 TRDMT1O14717 391 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms