RNA–Protein interactions for RNA: ENST00000513725.1

SFXN1-210, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-210ENST00000513725 ALDH1A2O94788 518 aa13.12□□□□□ -0.31
SFXN1-210ENST00000513725 SEC24AO95486 1093 aa13.12□□□□□ -0.31
SFXN1-210ENST00000513725 PRKCBP05771 671 aa13.12□□□□□ -0.31
SFXN1-210ENST00000513725 P2RY2P41231 377 aa13.12□□□□□ -0.31
SFXN1-210ENST00000513725 MCM2P49736 904 aa13.12□□□□□ -0.31
SFXN1-210ENST00000513725 ARPP19P56211 112 aa13.12□□□□□ -0.31
SFXN1-210ENST00000513725 AP3B2Q13367 1082 aa13.12□□□□□ -0.31
SFXN1-210ENST00000513725 BYSLQ13895 437 aaKnown RBP13.12□□□□□ -0.31
SFXN1-210ENST00000513725 PREPLQ4J6C6 727 aaPredicted RBP13.12□□□□□ -0.31
SFXN1-210ENST00000513725 C2orf27AQ580R0 203 aa13.12□□□□□ -0.31
SFXN1-210ENST00000513725 TTC30AQ86WT1 665 aa13.12□□□□□ -0.31
SFXN1-210ENST00000513725 ZNF513Q8N8E2 541 aaPredicted RBP13.12□□□□□ -0.31
SFXN1-210ENST00000513725 MDGA1Q8NFP4 955 aa13.12□□□□□ -0.31
SFXN1-210ENST00000513725 SETD7Q8WTS6 366 aaKnown RBP13.12□□□□□ -0.31
SFXN1-210ENST00000513725 DDX27Q96GQ7 796 aaKnown RBP13.12□□□□□ -0.31
SFXN1-210ENST00000513725 CPB2Q96IY4 423 aa13.12□□□□□ -0.31
SFXN1-210ENST00000513725 P2RY13Q9BPV8 354 aa13.12□□□□□ -0.31
SFXN1-210ENST00000513725 SH2D3AQ9BRG2 576 aa13.12□□□□□ -0.31
SFXN1-210ENST00000513725 FBRSL1Q9HCM7 1045 aaKnown RBP13.12□□□□□ -0.31
SFXN1-210ENST00000513725 RIC8AQ9NPQ8 531 aa13.12□□□□□ -0.31
SFXN1-210ENST00000513725 GKN1Q9NS71 199 aa13.12□□□□□ -0.31
SFXN1-210ENST00000513725 RELNP78509 3460 aa13.11□□□□□ -0.31
SFXN1-210ENST00000513725 TRAPPC3O43617 180 aa13.11□□□□□ -0.31
SFXN1-210ENST00000513725 TLX3O43711 291 aaPredicted RBP13.11□□□□□ -0.31
SFXN1-210ENST00000513725 TSPAN1O60635 241 aa13.11□□□□□ -0.31
SFXN1-210ENST00000513725 TKTP29401 623 aaKnown RBP13.11□□□□□ -0.31
SFXN1-210ENST00000513725 SFNP31947 248 aa13.11□□□□□ -0.31
SFXN1-210ENST00000513725 TPGS2Q68CL5 300 aa13.11□□□□□ -0.31
SFXN1-210ENST00000513725 SRBD1Q8N5C6 995 aaKnown RBP13.11□□□□□ -0.31
SFXN1-210ENST00000513725 PRPF31Q8WWY3 499 aaKnown RBP13.11□□□□□ -0.31
SFXN1-210ENST00000513725 PSPC1Q8WXF1 523 aaKnown RBP13.11□□□□□ -0.31
SFXN1-210ENST00000513725 RLN3Q8WXF3 142 aa13.11□□□□□ -0.31
SFXN1-210ENST00000513725 TMEM150BA6NC51 233 aa13.1□□□□□ -0.31
SFXN1-210ENST00000513725 AP5Z1O43299 807 aa13.1□□□□□ -0.31
SFXN1-210ENST00000513725 DKK1O94907 266 aa13.1□□□□□ -0.31
SFXN1-210ENST00000513725 THP07101 528 aa13.1□□□□□ -0.31
SFXN1-210ENST00000513725 ADSSP30520 456 aa13.1□□□□□ -0.31
SFXN1-210ENST00000513725 JAK3P52333 1124 aa13.1□□□□□ -0.31
SFXN1-210ENST00000513725 RIPPLY3P57055 190 aa13.1□□□□□ -0.31
SFXN1-210ENST00000513725 SEMG2Q02383 582 aa13.1□□□□□ -0.31
SFXN1-210ENST00000513725 LY6DQ14210 128 aa13.1□□□□□ -0.31
SFXN1-210ENST00000513725 C4orf17Q53FE4 359 aa13.1□□□□□ -0.31
SFXN1-210ENST00000513725 STXBP5Q5T5C0 1151 aa13.1□□□□□ -0.31
SFXN1-210ENST00000513725 ZNF574Q6ZN55 896 aaPredicted RBP13.1□□□□□ -0.31
SFXN1-210ENST00000513725 WHAMMQ8TF30 809 aa13.1□□□□□ -0.31
SFXN1-210ENST00000513725 CHFRQ96EP1 664 aa13.1□□□□□ -0.31
SFXN1-210ENST00000513725 PNMA5Q96PV4 448 aa13.1□□□□□ -0.31
SFXN1-210ENST00000513725 TOR4AQ9NXH8 423 aa13.1□□□□□ -0.31
SFXN1-210ENST00000513725 MAFFQ9ULX9 164 aa13.1□□□□□ -0.31
SFXN1-210ENST00000513725 NUP210Q8TEM1 1887 aaPredicted RBP13.1□□□□□ -0.31
SFXN1-210ENST00000513725 NBPF19A0A087WUL8 3843 aa13.09□□□□□ -0.31
SFXN1-210ENST00000513725 hCG_1642624A0A1W2PR95 340 aa13.09□□□□□ -0.31
SFXN1-210ENST00000513725 TMEM189-UBE2V1I3L0A0 370 aa13.09□□□□□ -0.31
SFXN1-210ENST00000513725 PLK4O00444 970 aa13.09□□□□□ -0.31
SFXN1-210ENST00000513725 B3GAT3O94766 335 aa13.09□□□□□ -0.31
SFXN1-210ENST00000513725 PLEKHA8P1O95397 391 aa13.09□□□□□ -0.31
SFXN1-210ENST00000513725 CYP3A4P08684 503 aa13.09□□□□□ -0.31
SFXN1-210ENST00000513725 ATXN1LP0C7T5 689 aaKnown RBP13.09□□□□□ -0.31
SFXN1-210ENST00000513725 ADCY7P51828 1080 aa13.09□□□□□ -0.31
SFXN1-210ENST00000513725 NAPAP54920 295 aa13.09□□□□□ -0.31
SFXN1-210ENST00000513725 LAMTOR4Q0VGL1 99 aa13.09□□□□□ -0.31
SFXN1-210ENST00000513725 SERINC3Q13530 473 aa13.09□□□□□ -0.31
SFXN1-210ENST00000513725 SMAD1Q15797 465 aaKnown RBP13.09□□□□□ -0.31
SFXN1-210ENST00000513725 ARHGAP15Q53QZ3 475 aa13.09□□□□□ -0.31
SFXN1-210ENST00000513725 EXOC8Q8IYI6 725 aa13.09□□□□□ -0.31
SFXN1-210ENST00000513725 CMTR1Q8N1G2 835 aaKnown RBP13.09□□□□□ -0.31
SFXN1-210ENST00000513725 RNF149Q8NC42 400 aa13.09□□□□□ -0.31
SFXN1-210ENST00000513725 SLC7A3Q8WY07 619 aa13.09□□□□□ -0.31
SFXN1-210ENST00000513725 MED8Q96G25 268 aa13.09□□□□□ -0.31
SFXN1-210ENST00000513725 TBC1D32Q96NH3 1257 aa13.09□□□□□ -0.31
SFXN1-210ENST00000513725 CDC6Q99741 560 aa13.09□□□□□ -0.31
SFXN1-210ENST00000513725 FAM83CQ9BQN1 747 aa13.09□□□□□ -0.31
SFXN1-210ENST00000513725 DSCC1Q9BVC3 393 aa13.09□□□□□ -0.31
SFXN1-210ENST00000513725 EBF3Q9H4W6 596 aa13.09□□□□□ -0.31
SFXN1-210ENST00000513725 HPS4Q9NQG7 708 aa13.09□□□□□ -0.31
SFXN1-210ENST00000513725 PAXBP1Q9Y5B6 917 aa13.09□□□□□ -0.31
SFXN1-210ENST00000513725 OTOL1A6NHN0 477 aaPredicted RBP13.08□□□□□ -0.32
SFXN1-210ENST00000513725 GOLGA8CPA6NN73 597 aa13.08□□□□□ -0.32
SFXN1-210ENST00000513725 DDX11L8A8MPP1 907 aa13.08□□□□□ -0.32
SFXN1-210ENST00000513725 ASAP2O43150 1006 aa13.08□□□□□ -0.32
SFXN1-210ENST00000513725 CHMP2AO43633 222 aa13.08□□□□□ -0.32
SFXN1-210ENST00000513725 DDAH1O94760 285 aa13.08□□□□□ -0.32
SFXN1-210ENST00000513725 U2AF2P26368 475 aaKnown RBP eCLIP13.08□□□□□ -0.32
SFXN1-210ENST00000513725 WEE1P30291 646 aa13.08□□□□□ -0.32
SFXN1-210ENST00000513725 TLE3Q04726 772 aa13.08□□□□□ -0.32
SFXN1-210ENST00000513725 PKDCCQ504Y2 493 aa13.08□□□□□ -0.32
SFXN1-210ENST00000513725 C6orf118Q5T5N4 469 aa13.08□□□□□ -0.32
SFXN1-210ENST00000513725 GPR158Q5T848 1215 aa13.08□□□□□ -0.32
SFXN1-210ENST00000513725 FRMD1Q8N878 549 aa13.08□□□□□ -0.32
SFXN1-210ENST00000513725 SNIP1Q8TAD8 396 aaKnown RBP13.08□□□□□ -0.32
SFXN1-210ENST00000513725 TRIM4Q9C037 500 aa13.08□□□□□ -0.32
SFXN1-210ENST00000513725 ATXN3LQ9H3M9 355 aa13.08□□□□□ -0.32
SFXN1-210ENST00000513725 PRDM16Q9HAZ2 1276 aa13.08□□□□□ -0.32
SFXN1-210ENST00000513725 HEMK1Q9Y5R4 338 aaPredicted RBP13.08□□□□□ -0.32
SFXN1-210ENST00000513725 H7C4K7 107 aa13.07□□□□□ -0.32
SFXN1-210ENST00000513725 NPTXRO95502 500 aa13.07□□□□□ -0.32
SFXN1-210ENST00000513725 PRAMEF12O95522 483 aa13.07□□□□□ -0.32
SFXN1-210ENST00000513725 FGF19O95750 216 aa13.07□□□□□ -0.32
SFXN1-210ENST00000513725 CALM1P0DP23 149 aa13.07□□□□□ -0.32
SFXN1-210ENST00000513725 CALM2P0DP24 149 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms