RNA–Protein interactions for RNA: ENST00000513098.5

UBE2D3-231, Transcript of ubiquitin conjugating enzyme E2 D3, human

TSL 3

Gene UBE2D3, Length 702 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2D3-231	ENST00000513098	CCDC39	Q9UFE4	941 aa		13.64	□□□□□ -0.23
UBE2D3-231	ENST00000513098	C2CD2	Q9Y426	696 aa		13.64	□□□□□ -0.23
UBE2D3-231	ENST00000513098	MYH15	Q9Y2K3	1946 aa		13.64	□□□□□ -0.23
UBE2D3-231	ENST00000513098	SPTBN4	Q9H254	2564 aa		13.63	□□□□□ -0.23
UBE2D3-231	ENST00000513098	ANO9	A1A5B4	782 aa		13.63	□□□□□ -0.23
UBE2D3-231	ENST00000513098	VPS37C	A5D8V6	355 aa	Predicted RBP	13.63	□□□□□ -0.23
UBE2D3-231	ENST00000513098	OR6C75	A6NL08	312 aa		13.63	□□□□□ -0.23
UBE2D3-231	ENST00000513098	STK25	O00506	426 aa		13.63	□□□□□ -0.23
UBE2D3-231	ENST00000513098	PPP1R37	O75864	691 aa		13.63	□□□□□ -0.23
UBE2D3-231	ENST00000513098	NMT1	P30419	496 aa	Known RBP	13.63	□□□□□ -0.23
UBE2D3-231	ENST00000513098	ARPP19	P56211	112 aa		13.63	□□□□□ -0.23
UBE2D3-231	ENST00000513098	SPAG1	Q07617	926 aa		13.63	□□□□□ -0.23
UBE2D3-231	ENST00000513098	ADCY1	Q08828	1119 aa		13.63	□□□□□ -0.23
UBE2D3-231	ENST00000513098	REST	Q13127	1097 aa		13.63	□□□□□ -0.23
UBE2D3-231	ENST00000513098	GPR17	Q13304	367 aa		13.63	□□□□□ -0.23
UBE2D3-231	ENST00000513098	MYBPC2	Q14324	1141 aa		13.63	□□□□□ -0.23
UBE2D3-231	ENST00000513098	CYP4A22	Q5TCH4	519 aa		13.63	□□□□□ -0.23
UBE2D3-231	ENST00000513098	RASSF8	Q8NHQ8	419 aa		13.63	□□□□□ -0.23
UBE2D3-231	ENST00000513098	DNAJC19	Q96DA6	116 aa		13.63	□□□□□ -0.23
UBE2D3-231	ENST00000513098	ZNF512	Q96ME7	567 aa	Predicted RBP	13.63	□□□□□ -0.23
UBE2D3-231	ENST00000513098	BACH2	Q9BYV9	841 aa		13.63	□□□□□ -0.23
UBE2D3-231	ENST00000513098	SEMA4A	Q9H3S1	761 aa		13.63	□□□□□ -0.23
UBE2D3-231	ENST00000513098	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	13.63	□□□□□ -0.23
UBE2D3-231	ENST00000513098	TRPV4	Q9HBA0	871 aa		13.63	□□□□□ -0.23
UBE2D3-231	ENST00000513098	EP300	Q09472	2414 aa	Predicted RBP	13.63	□□□□□ -0.23
UBE2D3-231	ENST00000513098	GVINP1	Q7Z2Y8	2422 aa		13.63	□□□□□ -0.23
UBE2D3-231	ENST00000513098	KANSL1L	A0AUZ9	987 aa		13.62	□□□□□ -0.23
UBE2D3-231	ENST00000513098	PRR23A	A6NEV1	266 aa		13.62	□□□□□ -0.23
UBE2D3-231	ENST00000513098	ANKRD63	C9JTQ0	380 aa		13.62	□□□□□ -0.23
UBE2D3-231	ENST00000513098	VNN2	O95498	520 aa		13.62	□□□□□ -0.23
UBE2D3-231	ENST00000513098	CYP11A1	P05108	521 aa		13.62	□□□□□ -0.23
UBE2D3-231	ENST00000513098	GAP43	P17677	238 aa		13.62	□□□□□ -0.23
UBE2D3-231	ENST00000513098	ADSS	P30520	456 aa		13.62	□□□□□ -0.23
UBE2D3-231	ENST00000513098	SLC39A14	Q15043	492 aa		13.62	□□□□□ -0.23
UBE2D3-231	ENST00000513098	POSTN	Q15063	836 aa		13.62	□□□□□ -0.23
UBE2D3-231	ENST00000513098	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	13.62	□□□□□ -0.23
UBE2D3-231	ENST00000513098	RRAGB	Q5VZM2	374 aa		13.62	□□□□□ -0.23
UBE2D3-231	ENST00000513098	C9orf57	Q5W0N0	161 aa		13.62	□□□□□ -0.23
UBE2D3-231	ENST00000513098	JADE1	Q6IE81	842 aa		13.62	□□□□□ -0.23
UBE2D3-231	ENST00000513098	IQCE	Q6IPM2	695 aa		13.62	□□□□□ -0.23
UBE2D3-231	ENST00000513098	RNF19B	Q6ZMZ0	732 aa		13.62	□□□□□ -0.23
UBE2D3-231	ENST00000513098	SV2B	Q7L1I2	683 aa		13.62	□□□□□ -0.23
UBE2D3-231	ENST00000513098	USP37	Q86T82	979 aa		13.62	□□□□□ -0.23
UBE2D3-231	ENST00000513098	NT5DC4	Q86YG4	428 aa		13.62	□□□□□ -0.23
UBE2D3-231	ENST00000513098	ELMOD1	Q8N336	334 aa		13.62	□□□□□ -0.23
UBE2D3-231	ENST00000513098	PJA1	Q8NG27	643 aa		13.62	□□□□□ -0.23
UBE2D3-231	ENST00000513098	MCRS1	Q96EZ8	462 aa		13.62	□□□□□ -0.23
UBE2D3-231	ENST00000513098	BORCS6	Q96GS4	357 aa		13.62	□□□□□ -0.23
UBE2D3-231	ENST00000513098	NELL2	Q99435	816 aa		13.62	□□□□□ -0.23
UBE2D3-231	ENST00000513098	CORO1B	Q9BR76	489 aa		13.62	□□□□□ -0.23
UBE2D3-231	ENST00000513098	GPR88	Q9GZN0	384 aa		13.62	□□□□□ -0.23
UBE2D3-231	ENST00000513098	TRPV5	Q9NQA5	729 aa		13.62	□□□□□ -0.23
UBE2D3-231	ENST00000513098	CEP72	Q9P209	647 aa		13.62	□□□□□ -0.23
UBE2D3-231	ENST00000513098	AGO2	Q9UKV8	859 aa	Known RBP	13.62	□□□□□ -0.23
UBE2D3-231	ENST00000513098	MTMR6	Q9Y217	621 aa		13.62	□□□□□ -0.23
UBE2D3-231	ENST00000513098	FRMD3	A2A2Y4	597 aa		13.61	□□□□□ -0.23
UBE2D3-231	ENST00000513098	MYMK	A6NI61	221 aa		13.61	□□□□□ -0.23
UBE2D3-231	ENST00000513098	MOSPD3	O75425	235 aa		13.61	□□□□□ -0.23
UBE2D3-231	ENST00000513098	GLUL	P15104	373 aa		13.61	□□□□□ -0.23
UBE2D3-231	ENST00000513098	CEBPB	P17676	345 aa		13.61	□□□□□ -0.23
UBE2D3-231	ENST00000513098	FCAR	P24071	287 aa		13.61	□□□□□ -0.23
UBE2D3-231	ENST00000513098	CCR2	P41597	374 aa		13.61	□□□□□ -0.23
UBE2D3-231	ENST00000513098	MAGEA9	P43362	315 aa		13.61	□□□□□ -0.23
UBE2D3-231	ENST00000513098	PLD1	Q13393	1074 aa		13.61	□□□□□ -0.23
UBE2D3-231	ENST00000513098	SNW1	Q13573	536 aa	Known RBP	13.61	□□□□□ -0.23
UBE2D3-231	ENST00000513098	TMEM132D	Q14C87	1099 aa		13.61	□□□□□ -0.23
UBE2D3-231	ENST00000513098	MLF2	Q15773	248 aa	Predicted RBP	13.61	□□□□□ -0.23
UBE2D3-231	ENST00000513098	SPECC1	Q5M775	1068 aa		13.61	□□□□□ -0.23
UBE2D3-231	ENST00000513098	ADAL	Q6DHV7	355 aa		13.61	□□□□□ -0.23
UBE2D3-231	ENST00000513098	TANGO2	Q6ICL3	276 aa		13.61	□□□□□ -0.23
UBE2D3-231	ENST00000513098	OVOS1	Q6IE37	1185 aa		13.61	□□□□□ -0.23
UBE2D3-231	ENST00000513098	CENPP	Q6IPU0	288 aa		13.61	□□□□□ -0.23
UBE2D3-231	ENST00000513098	CRELD2	Q6UXH1	353 aa	Predicted RBP	13.61	□□□□□ -0.23
UBE2D3-231	ENST00000513098	DSTYK	Q6XUX3	929 aa		13.61	□□□□□ -0.23
UBE2D3-231	ENST00000513098	PDZD4	Q76G19	769 aa	Predicted RBP	13.61	□□□□□ -0.23
UBE2D3-231	ENST00000513098	ASCL5	Q7RTU5	278 aa		13.61	□□□□□ -0.23
UBE2D3-231	ENST00000513098	FRMD5	Q7Z6J6	570 aa		13.61	□□□□□ -0.23
UBE2D3-231	ENST00000513098	C1orf210	Q8IVY1	113 aa		13.61	□□□□□ -0.23
UBE2D3-231	ENST00000513098	TMEM130	Q8N3G9	435 aa		13.61	□□□□□ -0.23
UBE2D3-231	ENST00000513098	ST13P5	Q8NFI4	369 aa	Predicted RBP	13.61	□□□□□ -0.23
UBE2D3-231	ENST00000513098	ING5	Q8WYH8	240 aa		13.61	□□□□□ -0.23
UBE2D3-231	ENST00000513098	NKD2	Q969F2	451 aa	Predicted RBP	13.61	□□□□□ -0.23
UBE2D3-231	ENST00000513098	TCEAL4	Q96EI5	215 aa		13.61	□□□□□ -0.23
UBE2D3-231	ENST00000513098	SENP8	Q96LD8	212 aa		13.61	□□□□□ -0.23
UBE2D3-231	ENST00000513098	ASB16	Q96NS5	453 aa		13.61	□□□□□ -0.23
UBE2D3-231	ENST00000513098	CLIC6	Q96NY7	704 aa		13.61	□□□□□ -0.23
UBE2D3-231	ENST00000513098	KXD1	Q9BQD3	176 aa		13.61	□□□□□ -0.23
UBE2D3-231	ENST00000513098	LRRC3	Q9BY71	257 aa		13.61	□□□□□ -0.23
UBE2D3-231	ENST00000513098	PLA2G2F	Q9BZM2	168 aa		13.61	□□□□□ -0.23
UBE2D3-231	ENST00000513098	ZHX3	Q9H4I2	956 aa		13.61	□□□□□ -0.23
UBE2D3-231	ENST00000513098	OLFML3	Q9NRN5	406 aa		13.61	□□□□□ -0.23
UBE2D3-231	ENST00000513098	TIMM13	Q9Y5L4	95 aa	Predicted RBP	13.61	□□□□□ -0.23
UBE2D3-231	ENST00000513098	PPEF2	O14830	753 aa		13.6	□□□□□ -0.23
UBE2D3-231	ENST00000513098	SPTLC1	O15269	473 aa		13.6	□□□□□ -0.23
UBE2D3-231	ENST00000513098	DCN	P07585	359 aa	Known RBP	13.6	□□□□□ -0.23
UBE2D3-231	ENST00000513098	CPB1	P15086	417 aa		13.6	□□□□□ -0.23
UBE2D3-231	ENST00000513098	RFX1	P22670	979 aa		13.6	□□□□□ -0.23
UBE2D3-231	ENST00000513098	SCN1A	P35498	2009 aa		13.6	□□□□□ -0.23
UBE2D3-231	ENST00000513098	TXLNA	P40222	546 aa		13.6	□□□□□ -0.23
UBE2D3-231	ENST00000513098	ACOT2	P49753	483 aa		13.6	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 36 ms