RNA–Protein interactions for RNA: ENST00000512756.5

COL11A1-210, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL11A1, Length 5,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-210ENST00000512756 GANCQ8TET4 914 aa13.08□□□□□ -0.31
COL11A1-210ENST00000512756 KDM4CQ9H3R0 1056 aa13.08□□□□□ -0.31
COL11A1-210ENST00000512756 TJP2Q9UDY2 1190 aa13.08□□□□□ -0.31
COL11A1-210ENST00000512756 NCOA3Q9Y6Q9 1424 aa13.08□□□□□ -0.32
COL11A1-210ENST00000512756 GPR75-ASB3A0A0A6YYF3 556 aa13.08□□□□□ -0.32
COL11A1-210ENST00000512756 C3orf62Q6ZUJ4 267 aa13.08□□□□□ -0.32
COL11A1-210ENST00000512756 TEX9Q8N6V9 391 aa13.08□□□□□ -0.32
COL11A1-210ENST00000512756 FEZF2Q8TBJ5 459 aa13.08□□□□□ -0.32
COL11A1-210ENST00000512756 MAP3K20Q9NYL2 800 aaKnown RBP13.08□□□□□ -0.32
COL11A1-210ENST00000512756 GRID1Q9ULK0 1009 aa13.08□□□□□ -0.32
COL11A1-210ENST00000512756 ZNRF3Q9ULT6 936 aa13.08□□□□□ -0.32
COL11A1-210ENST00000512756 TRAPPC3O43617 180 aa13.08□□□□□ -0.32
COL11A1-210ENST00000512756 MAN1A2O60476 641 aa13.08□□□□□ -0.32
COL11A1-210ENST00000512756 NTSR2O95665 410 aa13.08□□□□□ -0.32
COL11A1-210ENST00000512756 WEE2P0C1S8 567 aa13.08□□□□□ -0.32
COL11A1-210ENST00000512756 KLK7P49862 253 aa13.08□□□□□ -0.32
COL11A1-210ENST00000512756 PDK1Q15118 436 aa13.08□□□□□ -0.32
COL11A1-210ENST00000512756 SETD3Q86TU7 594 aaPredicted RBP13.08□□□□□ -0.32
COL11A1-210ENST00000512756 TPCN2Q8NHX9 752 aa13.08□□□□□ -0.32
COL11A1-210ENST00000512756 FAM151AQ8WW52 585 aa13.08□□□□□ -0.32
COL11A1-210ENST00000512756 ATXN7L3BQ96GX2 97 aa13.08□□□□□ -0.32
COL11A1-210ENST00000512756 NIF3L1Q9GZT8 377 aa13.08□□□□□ -0.32
COL11A1-210ENST00000512756 UNC45AQ9H3U1 944 aa13.08□□□□□ -0.32
COL11A1-210ENST00000512756 IRAK4Q9NWZ3 460 aa13.08□□□□□ -0.32
COL11A1-210ENST00000512756 SMARCAL1Q9NZC9 954 aa13.08□□□□□ -0.32
COL11A1-210ENST00000512756 PKD2L2Q9NZM6 624 aa13.08□□□□□ -0.32
COL11A1-210ENST00000512756 GGT7Q9UJ14 662 aa13.08□□□□□ -0.32
COL11A1-210ENST00000512756 CD4P01730 458 aa13.08□□□□□ -0.32
COL11A1-210ENST00000512756 PPP4CP60510 307 aa13.08□□□□□ -0.32
COL11A1-210ENST00000512756 BARGINQ6ZT62 677 aa13.08□□□□□ -0.32
COL11A1-210ENST00000512756 NT5C1AQ9BXI3 368 aa13.08□□□□□ -0.32
COL11A1-210ENST00000512756 HPSEQ9Y251 543 aa13.08□□□□□ -0.32
COL11A1-210ENST00000512756 MTSS1O43312 755 aa13.07□□□□□ -0.32
COL11A1-210ENST00000512756 MAP3K10Q02779 954 aa13.07□□□□□ -0.32
COL11A1-210ENST00000512756 TTC39BQ5VTQ0 682 aaPredicted RBP13.07□□□□□ -0.32
COL11A1-210ENST00000512756 PPIL6Q8IXY8 311 aa13.07□□□□□ -0.32
COL11A1-210ENST00000512756 SPATA18Q8TC71 538 aa13.07□□□□□ -0.32
COL11A1-210ENST00000512756 AGR3Q8TD06 166 aa13.07□□□□□ -0.32
COL11A1-210ENST00000512756 LZICQ8WZA0 190 aa13.07□□□□□ -0.32
COL11A1-210ENST00000512756 VPS33BQ9H267 617 aa13.07□□□□□ -0.32
COL11A1-210ENST00000512756 NEXMIFQ5QGS0 1516 aa13.07□□□□□ -0.32
COL11A1-210ENST00000512756 MYO3AQ8NEV4 1616 aa13.07□□□□□ -0.32
COL11A1-210ENST00000512756 RBP3P10745 1247 aa13.07□□□□□ -0.32
COL11A1-210ENST00000512756 MUTP22033 750 aa13.07□□□□□ -0.32
COL11A1-210ENST00000512756 FLOT2Q14254 428 aa13.07□□□□□ -0.32
COL11A1-210ENST00000512756 USP10Q14694 798 aaKnown RBP13.07□□□□□ -0.32
COL11A1-210ENST00000512756 VEPH1Q14D04 833 aa13.07□□□□□ -0.32
COL11A1-210ENST00000512756 FBXW10Q5XX13 1052 aa13.07□□□□□ -0.32
COL11A1-210ENST00000512756 PRR5LQ6MZQ0 368 aa13.07□□□□□ -0.32
COL11A1-210ENST00000512756 KDM7AQ6ZMT4 941 aa13.07□□□□□ -0.32
COL11A1-210ENST00000512756 RFX8Q6ZV50 586 aa13.07□□□□□ -0.32
COL11A1-210ENST00000512756 CATSPER3Q86XQ3 398 aa13.07□□□□□ -0.32
COL11A1-210ENST00000512756 SLC13A5Q86YT5 568 aaPredicted RBP13.07□□□□□ -0.32
COL11A1-210ENST00000512756 CALML6Q8TD86 181 aa13.07□□□□□ -0.32
COL11A1-210ENST00000512756 DACH2Q96NX9 599 aa13.07□□□□□ -0.32
COL11A1-210ENST00000512756 FRMD8P1Q9BZ68 369 aaPredicted RBP13.07□□□□□ -0.32
COL11A1-210ENST00000512756 MAD2L2Q9UI95 211 aa13.07□□□□□ -0.32
COL11A1-210ENST00000512756 NAGPAQ9UK23 515 aa13.07□□□□□ -0.32
COL11A1-210ENST00000512756 CHMP2BQ9UQN3 213 aa13.07□□□□□ -0.32
COL11A1-210ENST00000512756 PIN4Q9Y237 131 aaKnown RBP13.07□□□□□ -0.32
COL11A1-210ENST00000512756 NEMP1O14524 444 aa13.07□□□□□ -0.32
COL11A1-210ENST00000512756 PRKCEQ02156 737 aa13.07□□□□□ -0.32
COL11A1-210ENST00000512756 GRIN1Q05586 938 aa13.07□□□□□ -0.32
COL11A1-210ENST00000512756 SLC29A2Q14542 456 aa13.07□□□□□ -0.32
COL11A1-210ENST00000512756 MOXD1Q6UVY6 613 aa13.07□□□□□ -0.32
COL11A1-210ENST00000512756 SZRD1Q7Z422 152 aa13.07□□□□□ -0.32
COL11A1-210ENST00000512756 PCYOX1LQ8NBM8 494 aa13.07□□□□□ -0.32
COL11A1-210ENST00000512756 SCFD2Q8WU76 684 aa13.07□□□□□ -0.32
COL11A1-210ENST00000512756 COG4Q9H9E3 785 aa13.07□□□□□ -0.32
COL11A1-210ENST00000512756 ABT1Q9ULW3 272 aaKnown RBP13.07□□□□□ -0.32
COL11A1-210ENST00000512756 POLIQ9UNA4 740 aa13.07□□□□□ -0.32
COL11A1-210ENST00000512756 CST8O60676 142 aa13.07□□□□□ -0.32
COL11A1-210ENST00000512756 POLBP06746 335 aa13.07□□□□□ -0.32
COL11A1-210ENST00000512756 CPB1P15086 417 aa13.07□□□□□ -0.32
COL11A1-210ENST00000512756 PTPRN2Q92932 1015 aa13.07□□□□□ -0.32
COL11A1-210ENST00000512756 CELF4Q9BZC1 486 aaKnown RBP13.07□□□□□ -0.32
COL11A1-210ENST00000512756 RUBCNLQ9H714 662 aa13.07□□□□□ -0.32
COL11A1-210ENST00000512756 CEMIPQ8WUJ3 1361 aa13.07□□□□□ -0.32
COL11A1-210ENST00000512756 IQSEC2Q5JU85 1478 aa13.07□□□□□ -0.32
COL11A1-210ENST00000512756 CHD1O14646 1710 aa13.06□□□□□ -0.32
COL11A1-210ENST00000512756 RGS7P49802 495 aa13.06□□□□□ -0.32
COL11A1-210ENST00000512756 AFF2P51816 1311 aa13.06□□□□□ -0.32
COL11A1-210ENST00000512756 PTK2BQ14289 1009 aa13.06□□□□□ -0.32
COL11A1-210ENST00000512756 MFSD14CQ5VZR4 134 aa13.06□□□□□ -0.32
COL11A1-210ENST00000512756 DDX42Q86XP3 938 aaKnown RBP eCLIP13.06□□□□□ -0.32
COL11A1-210ENST00000512756 RMDN2Q96LZ7 410 aa13.06□□□□□ -0.32
COL11A1-210ENST00000512756 PABPC3Q9H361 631 aaKnown RBP13.06□□□□□ -0.32
COL11A1-210ENST00000512756 SLC24A3Q9HC58 644 aa13.06□□□□□ -0.32
COL11A1-210ENST00000512756 CASS4Q9NQ75 786 aa13.06□□□□□ -0.32
COL11A1-210ENST00000512756 PRMT7Q9NVM4 692 aaPredicted RBP13.06□□□□□ -0.32
COL11A1-210ENST00000512756 ARHGEF38Q9NXL2 777 aa13.06□□□□□ -0.32
COL11A1-210ENST00000512756 CDY2AQ9Y6F7 541 aa13.06□□□□□ -0.32
COL11A1-210ENST00000512756 CDY1Q9Y6F8 540 aa13.06□□□□□ -0.32
COL11A1-210ENST00000512756 LRRIQ3A6PVS8 624 aaPredicted RBP13.06□□□□□ -0.32
COL11A1-210ENST00000512756 POLRMTO00411 1230 aaKnown RBP13.06□□□□□ -0.32
COL11A1-210ENST00000512756 MYL2P10916 166 aa13.06□□□□□ -0.32
COL11A1-210ENST00000512756 GPD1P21695 349 aa13.06□□□□□ -0.32
COL11A1-210ENST00000512756 HSD17B3P37058 310 aa13.06□□□□□ -0.32
COL11A1-210ENST00000512756 NPEPPSP55786 919 aa13.06□□□□□ -0.32
COL11A1-210ENST00000512756 IER5Q5VY09 327 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms