RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 CDH22Q9UJ99 828 aa7.95□□□□□ -1.14
USP46-208ENST00000512656 LRRIQ4A6NIV6 560 aa7.94□□□□□ -1.14
USP46-208ENST00000512656 BTBD18B2RXH4 712 aa7.94□□□□□ -1.14
USP46-208ENST00000512656 B4GALT3O60512 393 aa7.94□□□□□ -1.14
USP46-208ENST00000512656 USO1O60763 962 aaKnown RBP7.94□□□□□ -1.14
USP46-208ENST00000512656 LILRB5O75023 590 aa7.94□□□□□ -1.14
USP46-208ENST00000512656 ASGR2P07307 311 aa7.94□□□□□ -1.14
USP46-208ENST00000512656 ARF4P18085 180 aaPredicted RBP7.94□□□□□ -1.14
USP46-208ENST00000512656 GLRA2P23416 452 aa7.94□□□□□ -1.14
USP46-208ENST00000512656 MLH1P40692 756 aa7.94□□□□□ -1.14
USP46-208ENST00000512656 RARRES1P49788 294 aa7.94□□□□□ -1.14
USP46-208ENST00000512656 SCNN1GP51170 649 aa7.94□□□□□ -1.14
USP46-208ENST00000512656 CLCN5P51795 746 aa7.94□□□□□ -1.14
USP46-208ENST00000512656 AFF1P51825 1210 aaKnown RBP7.94□□□□□ -1.14
USP46-208ENST00000512656 NEK4P51957 841 aa7.94□□□□□ -1.14
USP46-208ENST00000512656 DSG1Q02413 1049 aa7.94□□□□□ -1.14
USP46-208ENST00000512656 MBTD1Q05BQ5 628 aa7.94□□□□□ -1.14
USP46-208ENST00000512656 DSC1Q08554 894 aa7.94□□□□□ -1.14
USP46-208ENST00000512656 TCF15Q12870 199 aa7.94□□□□□ -1.14
USP46-208ENST00000512656 GRIK3Q13003 919 aa7.94□□□□□ -1.14
USP46-208ENST00000512656 ORC2Q13416 577 aaPredicted RBP7.94□□□□□ -1.14
USP46-208ENST00000512656 TDGQ13569 410 aa7.94□□□□□ -1.14
USP46-208ENST00000512656 PCSK7Q16549 785 aa7.94□□□□□ -1.14
USP46-208ENST00000512656 ME3Q16798 604 aa7.94□□□□□ -1.14
USP46-208ENST00000512656 USP41Q3LFD5 358 aa7.94□□□□□ -1.14
USP46-208ENST00000512656 RAB44Q7Z6P3 723 aaPredicted RBP7.94□□□□□ -1.14
USP46-208ENST00000512656 NSUN7Q8NE18 718 aaKnown RBP7.94□□□□□ -1.14
USP46-208ENST00000512656 ERMNQ8TAM6 284 aa7.94□□□□□ -1.14
USP46-208ENST00000512656 ASAP3Q8TDY4 903 aa7.94□□□□□ -1.14
USP46-208ENST00000512656 PIGOQ8TEQ8 1089 aa7.94□□□□□ -1.14
USP46-208ENST00000512656 PRIMPOLQ96LW4 560 aa7.94□□□□□ -1.14
USP46-208ENST00000512656 MTMR9Q96QG7 549 aa7.94□□□□□ -1.14
USP46-208ENST00000512656 APOL6Q9BWW8 343 aa7.94□□□□□ -1.14
USP46-208ENST00000512656 RHOBTB2Q9BYZ6 727 aa7.94□□□□□ -1.14
USP46-208ENST00000512656 GSX2Q9BZM3 304 aa7.94□□□□□ -1.14
USP46-208ENST00000512656 POLR3FQ9H1D9 316 aaPredicted RBP7.94□□□□□ -1.14
USP46-208ENST00000512656 C2orf40Q9H1Z8 148 aa7.94□□□□□ -1.14
USP46-208ENST00000512656 PLEKHA4Q9H4M7 779 aa7.94□□□□□ -1.14
USP46-208ENST00000512656 RXFP1Q9HBX9 757 aa7.94□□□□□ -1.14
USP46-208ENST00000512656 MAN1C1Q9NR34 630 aa7.94□□□□□ -1.14
USP46-208ENST00000512656 PPP4R2Q9NY27 417 aa7.94□□□□□ -1.14
USP46-208ENST00000512656 IGSF9Q9P2J2 1179 aa7.94□□□□□ -1.14
USP46-208ENST00000512656 PARP2Q9UGN5 583 aa7.94□□□□□ -1.14
USP46-208ENST00000512656 ZNF292O60281 2723 aa7.94□□□□□ -1.14
USP46-208ENST00000512656 CCDC195A0A1B0GUA6 201 aa7.93□□□□□ -1.14
USP46-208ENST00000512656 A0A1B0GUA9 196 aa7.93□□□□□ -1.14
USP46-208ENST00000512656 N4BP3O15049 544 aa7.93□□□□□ -1.14
USP46-208ENST00000512656 TEX28O15482 410 aa7.93□□□□□ -1.14
USP46-208ENST00000512656 TADA2AO75478 443 aa7.93□□□□□ -1.14
USP46-208ENST00000512656 NPTXRO95502 500 aa7.93□□□□□ -1.14
USP46-208ENST00000512656 PDGFBP01127 241 aaPredicted RBP7.93□□□□□ -1.14
USP46-208ENST00000512656 ATP2B1P20020 1258 aa7.93□□□□□ -1.14
USP46-208ENST00000512656 WEE1P30291 646 aa7.93□□□□□ -1.14
USP46-208ENST00000512656 CCINQ13939 588 aa7.93□□□□□ -1.14
USP46-208ENST00000512656 KIAA0319Q5VV43 1072 aa7.93□□□□□ -1.14
USP46-208ENST00000512656 ERICH6BQ5W0A0 696 aa7.93□□□□□ -1.14
USP46-208ENST00000512656 TAS1R1Q7RTX1 841 aa7.93□□□□□ -1.14
USP46-208ENST00000512656 APBB1IPQ7Z5R6 666 aaPredicted RBP7.93□□□□□ -1.14
USP46-208ENST00000512656 NXPE3Q969Y0 559 aa7.93□□□□□ -1.14
USP46-208ENST00000512656 ADPGKQ9BRR6 497 aa7.93□□□□□ -1.14
USP46-208ENST00000512656 POLR3CQ9BUI4 534 aaPredicted RBP7.93□□□□□ -1.14
USP46-208ENST00000512656 NXF3Q9H4D5 531 aaKnown RBP7.93□□□□□ -1.14
USP46-208ENST00000512656 PIDD1Q9HB75 910 aa7.93□□□□□ -1.14
USP46-208ENST00000512656 CHST7Q9NS84 486 aa7.93□□□□□ -1.14
USP46-208ENST00000512656 MARCH5Q9NX47 278 aa7.93□□□□□ -1.14
USP46-208ENST00000512656 ZDHHC7Q9NXF8 308 aa7.93□□□□□ -1.14
USP46-208ENST00000512656 FNIP2Q9P278 1114 aa7.93□□□□□ -1.14
USP46-208ENST00000512656 ADAM28Q9UKQ2 775 aa7.93□□□□□ -1.14
USP46-208ENST00000512656 FBXL21Q9UKT6 434 aa7.93□□□□□ -1.14
USP46-208ENST00000512656 SLC6A14Q9UN76 642 aa7.93□□□□□ -1.14
USP46-208ENST00000512656 HES2Q9Y543 173 aa7.93□□□□□ -1.14
USP46-208ENST00000512656 FAM186AA6NE01 2351 aa7.93□□□□□ -1.14
USP46-208ENST00000512656 SF3B1O75533 1304 aaKnown RBP eCLIP7.93□□□□□ -1.144e-7■■■■■ 133.7
USP46-208ENST00000512656 GVINP1Q7Z2Y8 2422 aa7.93□□□□□ -1.14
USP46-208ENST00000512656 CFAP54Q96N23 3096 aa7.93□□□□□ -1.14
USP46-208ENST00000512656 MYO10Q9HD67 2058 aa7.93□□□□□ -1.14
USP46-208ENST00000512656 USP34Q70CQ2 3546 aa7.92□□□□□ -1.14
USP46-208ENST00000512656 ARHGEF35A5YM69 484 aa7.92□□□□□ -1.14
USP46-208ENST00000512656 B4GALT5O43286 388 aa7.92□□□□□ -1.14
USP46-208ENST00000512656 JAK2O60674 1132 aa7.92□□□□□ -1.14
USP46-208ENST00000512656 DTNBO60941 627 aa7.92□□□□□ -1.14
USP46-208ENST00000512656 MAP3K6O95382 1288 aa7.92□□□□□ -1.14
USP46-208ENST00000512656 EFEMP2O95967 443 aa7.92□□□□□ -1.14
USP46-208ENST00000512656 MUTP22033 750 aa7.92□□□□□ -1.14
USP46-208ENST00000512656 AKAP5P24588 427 aa7.92□□□□□ -1.14
USP46-208ENST00000512656 GBP2P32456 591 aaPredicted RBP7.92□□□□□ -1.14
USP46-208ENST00000512656 MCM7P33993 719 aa7.92□□□□□ -1.14
USP46-208ENST00000512656 ELAVL2Q12926 359 aaKnown RBP7.92□□□□□ -1.14
USP46-208ENST00000512656 GNL2Q13823 731 aaKnown RBP7.92□□□□□ -1.14
USP46-208ENST00000512656 HSP90AA2PQ14568 343 aaPredicted RBP7.92□□□□□ -1.14
USP46-208ENST00000512656 PPP2R5AQ15172 486 aa7.92□□□□□ -1.14
USP46-208ENST00000512656 MAPK6Q16659 721 aa7.92□□□□□ -1.14
USP46-208ENST00000512656 FAM187BQ17R55 369 aa7.92□□□□□ -1.14
USP46-208ENST00000512656 HAUS3Q68CZ6 603 aa7.92□□□□□ -1.14
USP46-208ENST00000512656 CDCA2Q69YH5 1023 aaPredicted RBP7.92□□□□□ -1.14
USP46-208ENST00000512656 FUT10Q6P4F1 479 aa7.92□□□□□ -1.14
USP46-208ENST00000512656 PDXDC1Q6P996 788 aa7.92□□□□□ -1.14
USP46-208ENST00000512656 CATSPER3Q86XQ3 398 aa7.92□□□□□ -1.14
USP46-208ENST00000512656 RNF168Q8IYW5 571 aaPredicted RBP7.92□□□□□ -1.14
USP46-208ENST00000512656 DEPTORQ8TB45 409 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms