RNA–Protein interactions for RNA: ENST00000512243.5

SNF8-211, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 863 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-211ENST00000512243 GSDMAQ96QA5 445 aa10.33□□□□□ -0.76
SNF8-211ENST00000512243 IFIH1Q9BYX4 1025 aaKnown RBP10.33□□□□□ -0.76
SNF8-211ENST00000512243 PRMT7Q9NVM4 692 aaPredicted RBP10.33□□□□□ -0.76
SNF8-211ENST00000512243 DZANK1Q9NVP4 752 aa10.33□□□□□ -0.76
SNF8-211ENST00000512243 NOC2LQ9Y3T9 749 aaKnown RBP10.33□□□□□ -0.76
SNF8-211ENST00000512243 TRIP11Q15643 1979 aa10.32□□□□□ -0.76
SNF8-211ENST00000512243 RALGAPA2Q2PPJ7 1873 aa10.32□□□□□ -0.76
SNF8-211ENST00000512243 K7ERI5 159 aa10.32□□□□□ -0.76
SNF8-211ENST00000512243 FSCN2O14926 492 aa10.32□□□□□ -0.76
SNF8-211ENST00000512243 EREGO14944 169 aa10.32□□□□□ -0.76
SNF8-211ENST00000512243 EIF3DO15371 548 aaKnown RBP eCLIP10.32□□□□□ -0.76
SNF8-211ENST00000512243 NBNO60934 754 aa10.32□□□□□ -0.76
SNF8-211ENST00000512243 PHACTR2O75167 634 aa10.32□□□□□ -0.76
SNF8-211ENST00000512243 TNFRSF21O75509 655 aa10.32□□□□□ -0.76
SNF8-211ENST00000512243 CSDE1O75534 798 aaKnown RBP10.32□□□□□ -0.76
SNF8-211ENST00000512243 RHOBTB3O94955 611 aa10.32□□□□□ -0.76
SNF8-211ENST00000512243 CXCL10P02778 98 aa10.32□□□□□ -0.76
SNF8-211ENST00000512243 PFKMP08237 780 aa10.32□□□□□ -0.76
SNF8-211ENST00000512243 MYBP10242 640 aa10.32□□□□□ -0.76
SNF8-211ENST00000512243 CSF2RAP15509 400 aa10.32□□□□□ -0.76
SNF8-211ENST00000512243 FGFR4P22455 802 aa10.32□□□□□ -0.76
SNF8-211ENST00000512243 CD52P31358 61 aa10.32□□□□□ -0.76
SNF8-211ENST00000512243 CD68P34810 354 aaPredicted RBP10.32□□□□□ -0.76
SNF8-211ENST00000512243 SERPINB4P48594 390 aa10.32□□□□□ -0.76
SNF8-211ENST00000512243 EHHADHQ08426 723 aa10.32□□□□□ -0.76
SNF8-211ENST00000512243 NCBP1Q09161 790 aaKnown RBP10.32□□□□□ -0.76
SNF8-211ENST00000512243 PSMD2Q13200 908 aa10.32□□□□□ -0.76
SNF8-211ENST00000512243 FAM187BQ17R55 369 aa10.32□□□□□ -0.76
SNF8-211ENST00000512243 CAVIN1Q6NZI2 390 aaKnown RBP10.32□□□□□ -0.76
SNF8-211ENST00000512243 HAUS6Q7Z4H7 955 aa10.32□□□□□ -0.76
SNF8-211ENST00000512243 RPUSD2Q8IZ73 545 aaKnown RBP10.32□□□□□ -0.76
SNF8-211ENST00000512243 TMEM130Q8N3G9 435 aa10.32□□□□□ -0.76
SNF8-211ENST00000512243 SEPT8Q92599 483 aa10.32□□□□□ -0.76
SNF8-211ENST00000512243 APBB2Q92870 758 aa10.32□□□□□ -0.76
SNF8-211ENST00000512243 BICD1Q96G01 975 aa10.32□□□□□ -0.76
SNF8-211ENST00000512243 FIZ1Q96SL8 496 aa10.32□□□□□ -0.76
SNF8-211ENST00000512243 NTPCRQ9BSD7 190 aaKnown RBP10.32□□□□□ -0.76
SNF8-211ENST00000512243 GTPBP4Q9BZE4 634 aaKnown RBP10.32□□□□□ -0.76
SNF8-211ENST00000512243 CCDC113Q9H0I3 377 aa10.32□□□□□ -0.76
SNF8-211ENST00000512243 ST6GALNAC4Q9H4F1 302 aa10.32□□□□□ -0.76
SNF8-211ENST00000512243 MINDY3Q9H8M7 445 aa10.32□□□□□ -0.76
SNF8-211ENST00000512243 ERVK-5Q9HDB9 667 aa10.32□□□□□ -0.76
SNF8-211ENST00000512243 IL23AQ9NPF7 189 aa10.32□□□□□ -0.76
SNF8-211ENST00000512243 PIN4Q9Y237 131 aaKnown RBP10.32□□□□□ -0.76
SNF8-211ENST00000512243 PCDHA5Q9Y5H7 936 aa10.32□□□□□ -0.76
SNF8-211ENST00000512243 TTC3P53804 2025 aa10.32□□□□□ -0.76
SNF8-211ENST00000512243 CNTNAP2Q9UHC6 1331 aa10.32□□□□□ -0.76
SNF8-211ENST00000512243 PTPRSQ13332 1948 aa10.31□□□□□ -0.76
SNF8-211ENST00000512243 SCO2A0A1W2PP80 73 aa10.31□□□□□ -0.76
SNF8-211ENST00000512243 GLB1P16278 677 aa10.31□□□□□ -0.76
SNF8-211ENST00000512243 AXLP30530 894 aa10.31□□□□□ -0.76
SNF8-211ENST00000512243 GTF2BQ00403 316 aa10.31□□□□□ -0.76
SNF8-211ENST00000512243 PRPF4BQ13523 1007 aaKnown RBP10.31□□□□□ -0.76
SNF8-211ENST00000512243 PLEKHG4Q58EX7 1191 aa10.31□□□□□ -0.76
SNF8-211ENST00000512243 L1TD1Q5T7N2 865 aaKnown RBP10.31□□□□□ -0.76
SNF8-211ENST00000512243 NT5DC1Q5TFE4 455 aa10.31□□□□□ -0.76
SNF8-211ENST00000512243 FAM117BQ6P1L5 589 aa10.31□□□□□ -0.76
SNF8-211ENST00000512243 NOTUMQ6P988 496 aa10.31□□□□□ -0.76
SNF8-211ENST00000512243 CNKSR3Q6P9H4 555 aa10.31□□□□□ -0.76
SNF8-211ENST00000512243 PSRC1Q6PGN9 363 aaPredicted RBP10.31□□□□□ -0.76
SNF8-211ENST00000512243 ACAD11Q709F0 780 aa10.31□□□□□ -0.76
SNF8-211ENST00000512243 ZNF720Q7Z2F6 126 aa10.31□□□□□ -0.76
SNF8-211ENST00000512243 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.31□□□□□ -0.76
SNF8-211ENST00000512243 SPATA20Q8TB22 786 aa10.31□□□□□ -0.76
SNF8-211ENST00000512243 KCNN1Q92952 543 aa10.31□□□□□ -0.76
SNF8-211ENST00000512243 HPS3Q969F9 1004 aa10.31□□□□□ -0.76
SNF8-211ENST00000512243 ACCSQ96QU6 501 aa10.31□□□□□ -0.76
SNF8-211ENST00000512243 MRPL4Q9BYD3 311 aaKnown RBP10.31□□□□□ -0.76
SNF8-211ENST00000512243 FZD8Q9H461 694 aa10.31□□□□□ -0.76
SNF8-211ENST00000512243 AGO3Q9H9G7 860 aaKnown RBP10.31□□□□□ -0.76
SNF8-211ENST00000512243 SLC39A2Q9NP94 309 aa10.31□□□□□ -0.76
SNF8-211ENST00000512243 AGPAT5Q9NUQ2 364 aa10.31□□□□□ -0.76
SNF8-211ENST00000512243 MAN1B1Q9UKM7 699 aa10.31□□□□□ -0.76
SNF8-211ENST00000512243 PADI3Q9ULW8 664 aa10.31□□□□□ -0.76
SNF8-211ENST00000512243 TBX20Q9UMR3 447 aa10.31□□□□□ -0.76
SNF8-211ENST00000512243 ST3GAL5Q9UNP4 418 aa10.31□□□□□ -0.76
SNF8-211ENST00000512243 EXOC7Q9UPT5 735 aa10.31□□□□□ -0.76
SNF8-211ENST00000512243 PDCD11Q14690 1871 aaKnown RBP10.3□□□□□ -0.76
SNF8-211ENST00000512243 PDE2AO00408 941 aaPredicted RBP10.3□□□□□ -0.76
SNF8-211ENST00000512243 BIN1O00499 593 aa10.3□□□□□ -0.76
SNF8-211ENST00000512243 ACKR2O00590 384 aa10.3□□□□□ -0.76
SNF8-211ENST00000512243 N4BP3O15049 544 aa10.3□□□□□ -0.76
SNF8-211ENST00000512243 DDX3YO15523 660 aaKnown RBP10.3□□□□□ -0.76
SNF8-211ENST00000512243 TSPAN1O60635 241 aa10.3□□□□□ -0.76
SNF8-211ENST00000512243 PRPF6O94906 941 aaKnown RBP10.3□□□□□ -0.76
SNF8-211ENST00000512243 KIF20AO95235 890 aa10.3□□□□□ -0.76
SNF8-211ENST00000512243 ACTN1P12814 892 aa10.3□□□□□ -0.76
SNF8-211ENST00000512243 ZSCAN20P17040 1043 aaPredicted RBP10.3□□□□□ -0.76
SNF8-211ENST00000512243 SARSP49591 514 aaKnown RBP10.3□□□□□ -0.76
SNF8-211ENST00000512243 LIG4P49917 911 aa10.3□□□□□ -0.76
SNF8-211ENST00000512243 CASP5P51878 434 aa10.3□□□□□ -0.76
SNF8-211ENST00000512243 STIM1Q13586 685 aa10.3□□□□□ -0.76
SNF8-211ENST00000512243 GPNMBQ14956 572 aa10.3□□□□□ -0.76
SNF8-211ENST00000512243 ZC2HC1CQ53FD0 456 aaPredicted RBP10.3□□□□□ -0.76
SNF8-211ENST00000512243 ZNF658Q5TYW1 1059 aaPredicted RBP10.3□□□□□ -0.76
SNF8-211ENST00000512243 TWF2Q6IBS0 349 aaKnown RBP10.3□□□□□ -0.76
SNF8-211ENST00000512243 FAM43BQ6ZT52 329 aaPredicted RBP10.3□□□□□ -0.76
SNF8-211ENST00000512243 APBB1IPQ7Z5R6 666 aaPredicted RBP10.3□□□□□ -0.76
SNF8-211ENST00000512243 SYCP3Q8IZU3 236 aa10.3□□□□□ -0.76
SNF8-211ENST00000512243 TRIML1Q8N9V2 468 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms