RNA–Protein interactions for RNA: ENST00000512055.5

CPNE4-209, Transcript of copine 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CPNE4, Length 5,431 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-209ENST00000512055 RBM12Q9NTZ6 932 aaKnown RBP11.4□□□□□ -0.58
CPNE4-209ENST00000512055 SLC5A4Q9NY91 659 aa11.4□□□□□ -0.58
CPNE4-209ENST00000512055 RNF181Q9P0P0 153 aa11.4□□□□□ -0.58
CPNE4-209ENST00000512055 KIF17Q9P2E2 1029 aa11.4□□□□□ -0.58
CPNE4-209ENST00000512055 H7C0C1 242 aa11.4□□□□□ -0.58
CPNE4-209ENST00000512055 TMCC1O94876 653 aa11.4□□□□□ -0.58
CPNE4-209ENST00000512055 HSPA6P17066 643 aa11.4□□□□□ -0.58
CPNE4-209ENST00000512055 ATP5OP48047 213 aa11.4□□□□□ -0.58
CPNE4-209ENST00000512055 CUL1Q13616 776 aa11.4□□□□□ -0.58
CPNE4-209ENST00000512055 TRIM71Q2Q1W2 868 aaKnown RBP11.4□□□□□ -0.58
CPNE4-209ENST00000512055 RFX6Q8HWS3 928 aa11.4□□□□□ -0.58
CPNE4-209ENST00000512055 GLIS3Q8NEA6 775 aa11.4□□□□□ -0.58
CPNE4-209ENST00000512055 SLC30A5Q8TAD4 765 aa11.4□□□□□ -0.58
CPNE4-209ENST00000512055 ZNF384Q8TF68 577 aa11.4□□□□□ -0.58
CPNE4-209ENST00000512055 NARS2Q96I59 477 aaKnown RBP11.4□□□□□ -0.58
CPNE4-209ENST00000512055 MED10Q9BTT4 135 aa11.4□□□□□ -0.58
CPNE4-209ENST00000512055 CYP4F11Q9HBI6 524 aa11.4□□□□□ -0.58
CPNE4-209ENST00000512055 DONSONQ9NYP3 566 aa11.4□□□□□ -0.58
CPNE4-209ENST00000512055 TMX2Q9Y320 296 aa11.4□□□□□ -0.58
CPNE4-209ENST00000512055 CAPN6Q9Y6Q1 641 aa11.4□□□□□ -0.58
CPNE4-209ENST00000512055 PJA2O43164 708 aa11.4□□□□□ -0.58
CPNE4-209ENST00000512055 LDHAP00338 332 aaKnown RBP11.4□□□□□ -0.58
CPNE4-209ENST00000512055 PLS3P13797 630 aa11.4□□□□□ -0.58
CPNE4-209ENST00000512055 HERVK_113P62684 666 aa11.4□□□□□ -0.58
CPNE4-209ENST00000512055 RUNX1T1Q06455 604 aa11.4□□□□□ -0.58
CPNE4-209ENST00000512055 CNGA3Q16281 694 aa11.4□□□□□ -0.58
CPNE4-209ENST00000512055 RIN2Q8WYP3 895 aaPredicted RBP11.4□□□□□ -0.58
CPNE4-209ENST00000512055 BTBD6Q96KE9 485 aa11.4□□□□□ -0.58
CPNE4-209ENST00000512055 RBAKQ9NYW8 714 aaPredicted RBP11.4□□□□□ -0.58
CPNE4-209ENST00000512055 HACL1Q9UJ83 578 aa11.4□□□□□ -0.58
CPNE4-209ENST00000512055 AGO2Q9UKV8 859 aaKnown RBP11.4□□□□□ -0.58
CPNE4-209ENST00000512055 A0A0U1RQJ8 604 aa11.4□□□□□ -0.59
CPNE4-209ENST00000512055 HAUS5O94927 633 aa11.4□□□□□ -0.59
CPNE4-209ENST00000512055 ACSL3O95573 720 aa11.4□□□□□ -0.59
CPNE4-209ENST00000512055 CXCL9Q07325 125 aa11.4□□□□□ -0.59
CPNE4-209ENST00000512055 CAPRIN1Q14444 709 aaKnown RBP11.4□□□□□ -0.59
CPNE4-209ENST00000512055 TRIM67Q6ZTA4 783 aa11.4□□□□□ -0.59
CPNE4-209ENST00000512055 DNAAF5Q86Y56 855 aa11.4□□□□□ -0.59
CPNE4-209ENST00000512055 GPD1LQ8N335 351 aa11.4□□□□□ -0.59
CPNE4-209ENST00000512055 SLC35G2Q8TBE7 412 aa11.4□□□□□ -0.59
CPNE4-209ENST00000512055 INPP5FQ9Y2H2 1132 aa11.4□□□□□ -0.59
CPNE4-209ENST00000512055 L3MBTL1Q9Y468 752 aa11.4□□□□□ -0.59
CPNE4-209ENST00000512055 ASAP2O43150 1006 aa11.39□□□□□ -0.59
CPNE4-209ENST00000512055 TTI1O43156 1089 aa11.39□□□□□ -0.59
CPNE4-209ENST00000512055 UBTFL6P0CB48 400 aaPredicted RBP11.39□□□□□ -0.59
CPNE4-209ENST00000512055 ABCD1P33897 745 aa11.39□□□□□ -0.59
CPNE4-209ENST00000512055 BFSP2Q13515 415 aa11.39□□□□□ -0.59
CPNE4-209ENST00000512055 SNRNP35Q16560 246 aaKnown RBP11.39□□□□□ -0.59
CPNE4-209ENST00000512055 KIF19Q2TAC6 998 aa11.39□□□□□ -0.59
CPNE4-209ENST00000512055 GMCL1P1Q8NEA9 526 aa11.39□□□□□ -0.59
CPNE4-209ENST00000512055 BTN2A2Q8WVV5 523 aa11.39□□□□□ -0.59
CPNE4-209ENST00000512055 PNKPQ96T60 521 aa11.39□□□□□ -0.59
CPNE4-209ENST00000512055 ARHGAP20Q9P2F6 1191 aa11.39□□□□□ -0.59
CPNE4-209ENST00000512055 FAM198AQ9UFP1 575 aa11.39□□□□□ -0.59
CPNE4-209ENST00000512055 SEPT3Q9UH03 358 aa11.39□□□□□ -0.59
CPNE4-209ENST00000512055 KLHL20Q9Y2M5 609 aa11.39□□□□□ -0.59
CPNE4-209ENST00000512055 MIF4GDA9UHW6 222 aaKnown RBP11.39□□□□□ -0.59
CPNE4-209ENST00000512055 TLR3O15455 904 aaKnown RBP11.39□□□□□ -0.59
CPNE4-209ENST00000512055 CDC40O60508 579 aaKnown RBP eCLIP11.39□□□□□ -0.59
CPNE4-209ENST00000512055 FGRP09769 529 aa11.39□□□□□ -0.59
CPNE4-209ENST00000512055 FDX1P10109 184 aa11.39□□□□□ -0.59
CPNE4-209ENST00000512055 CCT3P49368 545 aaKnown RBP11.39□□□□□ -0.59
CPNE4-209ENST00000512055 ITKQ08881 620 aa11.39□□□□□ -0.59
CPNE4-209ENST00000512055 PRPSAP1Q14558 356 aa11.39□□□□□ -0.59
CPNE4-209ENST00000512055 DMC1Q14565 340 aa11.39□□□□□ -0.59
CPNE4-209ENST00000512055 ZNF568Q3ZCX4 644 aa11.39□□□□□ -0.59
CPNE4-209ENST00000512055 PCGF5Q86SE9 256 aa11.39□□□□□ -0.59
CPNE4-209ENST00000512055 ERICH1Q86X53 443 aa11.39□□□□□ -0.59
CPNE4-209ENST00000512055 AGBL3Q8NEM8 1001 aa11.39□□□□□ -0.59
CPNE4-209ENST00000512055 HEXIM2Q96MH2 286 aaKnown RBP11.39□□□□□ -0.59
CPNE4-209ENST00000512055 ELP3Q9H9T3 547 aa11.39□□□□□ -0.59
CPNE4-209ENST00000512055 XPO1O14980 1071 aaKnown RBP11.39□□□□□ -0.59
CPNE4-209ENST00000512055 SEMA3DO95025 777 aa11.39□□□□□ -0.59
CPNE4-209ENST00000512055 ICAM1P05362 532 aa11.39□□□□□ -0.59
CPNE4-209ENST00000512055 CTCFP49711 727 aaPredicted RBP11.39□□□□□ -0.59
CPNE4-209ENST00000512055 BZW1Q7L1Q6 419 aaKnown RBP11.39□□□□□ -0.59
CPNE4-209ENST00000512055 FAM149B1Q96BN6 582 aa11.39□□□□□ -0.59
CPNE4-209ENST00000512055 UBE2OQ9C0C9 1292 aaKnown RBP11.39□□□□□ -0.59
CPNE4-209ENST00000512055 ZWILCHQ9H900 591 aa11.39□□□□□ -0.59
CPNE4-209ENST00000512055 KIAA1586Q9HCI6 787 aa11.39□□□□□ -0.59
CPNE4-209ENST00000512055 AGPAT3Q9NRZ7 376 aa11.39□□□□□ -0.59
CPNE4-209ENST00000512055 KRT16P08779 473 aa11.39□□□□□ -0.59
CPNE4-209ENST00000512055 TCF3P15923 654 aa11.39□□□□□ -0.59
CPNE4-209ENST00000512055 SCP2P22307 547 aa11.39□□□□□ -0.59
CPNE4-209ENST00000512055 IFRD2Q12894 506 aaPredicted RBP11.39□□□□□ -0.59
CPNE4-209ENST00000512055 NAB2Q15742 525 aa11.39□□□□□ -0.59
CPNE4-209ENST00000512055 SHROOM1Q2M3G4 852 aaPredicted RBP11.39□□□□□ -0.59
CPNE4-209ENST00000512055 C15orf52Q6ZUT6 534 aaKnown RBP11.39□□□□□ -0.59
CPNE4-209ENST00000512055 SYNGAP1Q96PV0 1343 aa11.39□□□□□ -0.59
CPNE4-209ENST00000512055 LRRC37BQ96QE4 947 aa11.39□□□□□ -0.59
CPNE4-209ENST00000512055 EXOSC4Q9NPD3 245 aaKnown RBP11.39□□□□□ -0.59
CPNE4-209ENST00000512055 HAUS2Q9NVX0 235 aa11.39□□□□□ -0.59
CPNE4-209ENST00000512055 ADA2Q9NZK5 511 aa11.39□□□□□ -0.59
CPNE4-209ENST00000512055 DSEQ9UL01 958 aa11.39□□□□□ -0.59
CPNE4-209ENST00000512055 KCPQ6ZWJ8 1503 aa11.38□□□□□ -0.59
CPNE4-209ENST00000512055 EXOC1LA0A1B0GW35 172 aa11.38□□□□□ -0.59
CPNE4-209ENST00000512055 CFAP73A6NFT4 308 aa11.38□□□□□ -0.59
CPNE4-209ENST00000512055 TAF4O00268 1085 aa11.38□□□□□ -0.59
CPNE4-209ENST00000512055 KRT6AP02538 564 aa11.38□□□□□ -0.59
CPNE4-209ENST00000512055 KRT6BP04259 564 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms