RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 MXD4Q14582 209 aaPredicted RBP5.38□□□□□ -1.55
TRAPPC11-208ENST00000511955 AADACL4Q5VUY2 407 aa5.38□□□□□ -1.55
TRAPPC11-208ENST00000511955 PRAMEF18Q5VWM3 479 aa5.38□□□□□ -1.55
TRAPPC11-208ENST00000511955 PGM2L1Q6PCE3 622 aa5.38□□□□□ -1.55
TRAPPC11-208ENST00000511955 POTEEQ6S8J3 1075 aa5.38□□□□□ -1.55
TRAPPC11-208ENST00000511955 PPP1R21Q6ZMI0 780 aa5.38□□□□□ -1.55
TRAPPC11-208ENST00000511955 TUBA1AQ71U36 451 aa5.38□□□□□ -1.55
TRAPPC11-208ENST00000511955 KRT74Q7RTS7 529 aa5.38□□□□□ -1.55
TRAPPC11-208ENST00000511955 LSRQ86X29 649 aaPredicted RBP5.38□□□□□ -1.55
TRAPPC11-208ENST00000511955 AHI1Q8N157 1196 aa5.38□□□□□ -1.55
TRAPPC11-208ENST00000511955 ERMNQ8TAM6 284 aa5.38□□□□□ -1.55
TRAPPC11-208ENST00000511955 CEP76Q8TAP6 659 aa5.38□□□□□ -1.55
TRAPPC11-208ENST00000511955 HSPH1Q92598 858 aa5.38□□□□□ -1.55
TRAPPC11-208ENST00000511955 KISS1RQ969F8 398 aaPredicted RBP5.38□□□□□ -1.55
TRAPPC11-208ENST00000511955 SLC10A4Q96EP9 437 aa5.38□□□□□ -1.55
TRAPPC11-208ENST00000511955 FAM163AQ96GL9 167 aaPredicted RBP5.38□□□□□ -1.55
TRAPPC11-208ENST00000511955 CABS1Q96KC9 395 aa5.38□□□□□ -1.55
TRAPPC11-208ENST00000511955 AK8Q96MA6 479 aa5.38□□□□□ -1.55
TRAPPC11-208ENST00000511955 ACPTQ9BZG2 426 aa5.38□□□□□ -1.55
TRAPPC11-208ENST00000511955 RNF38Q9H0F5 515 aa5.38□□□□□ -1.55
TRAPPC11-208ENST00000511955 BHMT2Q9H2M3 363 aa5.38□□□□□ -1.55
TRAPPC11-208ENST00000511955 TAF1DQ9H5J8 278 aaPredicted RBP5.38□□□□□ -1.55
TRAPPC11-208ENST00000511955 ANTXR1Q9H6X2 564 aa5.38□□□□□ -1.55
TRAPPC11-208ENST00000511955 SYNCQ9H7C4 482 aa5.38□□□□□ -1.55
TRAPPC11-208ENST00000511955 CYP4F12Q9HCS2 524 aa5.38□□□□□ -1.55
TRAPPC11-208ENST00000511955 GPR108Q9NPR9 543 aa5.38□□□□□ -1.55
TRAPPC11-208ENST00000511955 MALT1Q9UDY8 824 aa5.38□□□□□ -1.55
TRAPPC11-208ENST00000511955 TNPO3Q9Y5L0 923 aaKnown RBP5.38□□□□□ -1.55
TRAPPC11-208ENST00000511955 SESN1Q9Y6P5 492 aa5.38□□□□□ -1.55
TRAPPC11-208ENST00000511955 A0A1B0GUL6 1792 aa5.38□□□□□ -1.55
TRAPPC11-208ENST00000511955 A0A0B4J269 797 aa5.37□□□□□ -1.55
TRAPPC11-208ENST00000511955 A0A1W2PPL8 197 aa5.37□□□□□ -1.55
TRAPPC11-208ENST00000511955 ZSCAN9O15535 394 aaPredicted RBP5.37□□□□□ -1.55
TRAPPC11-208ENST00000511955 IDH1O75874 414 aaKnown RBP5.37□□□□□ -1.55
TRAPPC11-208ENST00000511955 PIAS2O75928 621 aa5.37□□□□□ -1.55
TRAPPC11-208ENST00000511955 CSTBP04080 98 aaKnown RBP5.37□□□□□ -1.55
TRAPPC11-208ENST00000511955 U2AF2P26368 475 aaKnown RBP eCLIP5.37□□□□□ -1.551e-7■■□□□ 12.8
TRAPPC11-208ENST00000511955 NOS3P29474 1203 aa5.37□□□□□ -1.55
TRAPPC11-208ENST00000511955 HOXD13P35453 343 aa5.37□□□□□ -1.55
TRAPPC11-208ENST00000511955 HIRAP54198 1017 aaPredicted RBP5.37□□□□□ -1.55
TRAPPC11-208ENST00000511955 GPS2Q13227 327 aa5.37□□□□□ -1.55
TRAPPC11-208ENST00000511955 TRPC3Q13507 836 aa5.37□□□□□ -1.55
TRAPPC11-208ENST00000511955 CUL4AQ13619 759 aa5.37□□□□□ -1.55
TRAPPC11-208ENST00000511955 CFAP100Q494V2 611 aa5.37□□□□□ -1.55
TRAPPC11-208ENST00000511955 LRRC69Q6ZNQ3 347 aa5.37□□□□□ -1.55
TRAPPC11-208ENST00000511955 LRRTM4Q86VH4 590 aa5.37□□□□□ -1.55
TRAPPC11-208ENST00000511955 PRR18Q8N4B5 295 aa5.37□□□□□ -1.55
TRAPPC11-208ENST00000511955 Q8NFD4 153 aa5.37□□□□□ -1.55
TRAPPC11-208ENST00000511955 CCDC26Q8TAB7 109 aa5.37□□□□□ -1.55
TRAPPC11-208ENST00000511955 ZSCAN18Q8TBC5 510 aaPredicted RBP5.37□□□□□ -1.55
TRAPPC11-208ENST00000511955 RAPGEF5Q92565 580 aa5.37□□□□□ -1.55
TRAPPC11-208ENST00000511955 ATP2A3Q93084 1043 aa5.37□□□□□ -1.55
TRAPPC11-208ENST00000511955 VPS50Q96JG6 964 aa5.37□□□□□ -1.55
TRAPPC11-208ENST00000511955 CDC6Q99741 560 aa5.37□□□□□ -1.55
TRAPPC11-208ENST00000511955 OCSTAMPQ9BR26 566 aa5.37□□□□□ -1.55
TRAPPC11-208ENST00000511955 EMILIN2Q9BXX0 1053 aa5.37□□□□□ -1.55
TRAPPC11-208ENST00000511955 BCO2Q9BYV7 579 aa5.37□□□□□ -1.55
TRAPPC11-208ENST00000511955 STMN4Q9H169 189 aaPredicted RBP5.37□□□□□ -1.55
TRAPPC11-208ENST00000511955 OR10A4Q9H209 315 aa5.37□□□□□ -1.55
TRAPPC11-208ENST00000511955 EHD1Q9H4M9 534 aa5.37□□□□□ -1.55
TRAPPC11-208ENST00000511955 FAM204AQ9H8W3 233 aa5.37□□□□□ -1.55
TRAPPC11-208ENST00000511955 MYOZ2Q9NPC6 264 aa5.37□□□□□ -1.55
TRAPPC11-208ENST00000511955 SCUBE2Q9NQ36 999 aa5.37□□□□□ -1.55
TRAPPC11-208ENST00000511955 IL1RAPL1Q9NZN1 696 aa5.37□□□□□ -1.55
TRAPPC11-208ENST00000511955 LRP2BPQ9P2M1 347 aa5.37□□□□□ -1.55
TRAPPC11-208ENST00000511955 CCDC169A6NNP5 214 aa5.37□□□□□ -1.55
TRAPPC11-208ENST00000511955 CAPN14A8MX76 684 aa5.37□□□□□ -1.55
TRAPPC11-208ENST00000511955 TRAF5O00463 557 aa5.37□□□□□ -1.55
TRAPPC11-208ENST00000511955 FMO6PO60774 539 aa5.37□□□□□ -1.55
TRAPPC11-208ENST00000511955 CHGBP05060 677 aa5.37□□□□□ -1.55
TRAPPC11-208ENST00000511955 RHOXF2BP0C7M4 288 aa5.37□□□□□ -1.55
TRAPPC11-208ENST00000511955 JMJD7P0C870 316 aa5.37□□□□□ -1.55
TRAPPC11-208ENST00000511955 FGFR1P11362 822 aa5.37□□□□□ -1.55
TRAPPC11-208ENST00000511955 ZNF3P17036 446 aa5.37□□□□□ -1.55
TRAPPC11-208ENST00000511955 ARF4P18085 180 aaPredicted RBP5.37□□□□□ -1.55
TRAPPC11-208ENST00000511955 ADSLP30566 484 aaPredicted RBP5.37□□□□□ -1.55
TRAPPC11-208ENST00000511955 PIK3CBP42338 1070 aa5.37□□□□□ -1.55
TRAPPC11-208ENST00000511955 MSH2P43246 934 aa5.37□□□□□ -1.55
TRAPPC11-208ENST00000511955 GCGRP47871 477 aa5.37□□□□□ -1.55
TRAPPC11-208ENST00000511955 MAP3K10Q02779 954 aa5.37□□□□□ -1.55
TRAPPC11-208ENST00000511955 CUL4BQ13620 913 aa5.37□□□□□ -1.55
TRAPPC11-208ENST00000511955 ZNF792Q3KQV3 632 aa5.37□□□□□ -1.55
TRAPPC11-208ENST00000511955 STXBP5Q5T5C0 1151 aa5.37□□□□□ -1.55
TRAPPC11-208ENST00000511955 ISLR2Q6UXK2 745 aa5.37□□□□□ -1.55
TRAPPC11-208ENST00000511955 C15orf52Q6ZUT6 534 aaKnown RBP5.37□□□□□ -1.55
TRAPPC11-208ENST00000511955 KCTD6Q8NC69 237 aa5.37□□□□□ -1.55
TRAPPC11-208ENST00000511955 CHST13Q8NET6 341 aa5.37□□□□□ -1.55
TRAPPC11-208ENST00000511955 PPP1R35Q8TAP8 253 aa5.37□□□□□ -1.55
TRAPPC11-208ENST00000511955 TUBGCP3Q96CW5 907 aa5.37□□□□□ -1.55
TRAPPC11-208ENST00000511955 ZDHHC15Q96MV8 337 aa5.37□□□□□ -1.55
TRAPPC11-208ENST00000511955 MTMR9Q96QG7 549 aa5.37□□□□□ -1.55
TRAPPC11-208ENST00000511955 RHOXF2Q9BQY4 288 aa5.37□□□□□ -1.55
TRAPPC11-208ENST00000511955 TMEM120AQ9BXJ8 343 aa5.37□□□□□ -1.55
TRAPPC11-208ENST00000511955 TSPAN10Q9H1Z9 355 aaPredicted RBP5.37□□□□□ -1.55
TRAPPC11-208ENST00000511955 PDE7BQ9NP56 450 aa5.37□□□□□ -1.55
TRAPPC11-208ENST00000511955 NPHS2Q9NP85 383 aa5.37□□□□□ -1.55
TRAPPC11-208ENST00000511955 POLMQ9NP87 494 aaPredicted RBP5.37□□□□□ -1.55
TRAPPC11-208ENST00000511955 MAP10Q9P2G4 905 aa5.37□□□□□ -1.55
TRAPPC11-208ENST00000511955 CORO2BQ9UQ03 480 aa5.37□□□□□ -1.55
TRAPPC11-208ENST00000511955 AOX1Q06278 1338 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms