RNA–Protein interactions for RNA: ENST00000511767.3

PDLIM5-216, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-216ENST00000511767 CLIC2O15247 247 aa17.46■□□□□ 0.39
PDLIM5-216ENST00000511767 GPR37L1O60883 481 aa17.46■□□□□ 0.39
PDLIM5-216ENST00000511767 HNRNPA1P09651 372 aaKnown RBP eCLIP17.46■□□□□ 0.39
PDLIM5-216ENST00000511767 TYMPP19971 482 aa17.46■□□□□ 0.39
PDLIM5-216ENST00000511767 ROR1Q01973 937 aa17.46■□□□□ 0.39
PDLIM5-216ENST00000511767 KNOP1Q1ED39 458 aaKnown RBP17.46■□□□□ 0.39
PDLIM5-216ENST00000511767 CTXN3Q4LDR2 81 aa17.46■□□□□ 0.39
PDLIM5-216ENST00000511767 DSTYKQ6XUX3 929 aa17.46■□□□□ 0.39
PDLIM5-216ENST00000511767 NELFCDQ8IXH7 590 aa17.46■□□□□ 0.39
PDLIM5-216ENST00000511767 ZDHHC14Q8IZN3 488 aa17.46■□□□□ 0.39
PDLIM5-216ENST00000511767 CXorf38Q8TB03 319 aa17.46■□□□□ 0.39
PDLIM5-216ENST00000511767 CACTINQ8WUQ7 758 aaKnown RBP17.46■□□□□ 0.39
PDLIM5-216ENST00000511767 KIAA1586Q9HCI6 787 aa17.46■□□□□ 0.39
PDLIM5-216ENST00000511767 PDE11AQ9HCR9 933 aa17.46■□□□□ 0.39
PDLIM5-216ENST00000511767 AGPAT3Q9NRZ7 376 aa17.46■□□□□ 0.39
PDLIM5-216ENST00000511767 RBAKQ9NYW8 714 aaPredicted RBP17.46■□□□□ 0.39
PDLIM5-216ENST00000511767 LIMD1Q9UGP4 676 aa17.46■□□□□ 0.39
PDLIM5-216ENST00000511767 DOCK6Q96HP0 2047 aa17.46■□□□□ 0.39
PDLIM5-216ENST00000511767 PDCD11Q14690 1871 aaKnown RBP17.46■□□□□ 0.38
PDLIM5-216ENST00000511767 WDR27A2RRH5 827 aa17.45■□□□□ 0.38
PDLIM5-216ENST00000511767 C8AP07357 584 aa17.45■□□□□ 0.38
PDLIM5-216ENST00000511767 ATF2P15336 505 aa17.45■□□□□ 0.38
PDLIM5-216ENST00000511767 SP100P23497 879 aaPredicted RBP17.45■□□□□ 0.38
PDLIM5-216ENST00000511767 TFAMQ00059 246 aaKnown RBP17.45■□□□□ 0.38
PDLIM5-216ENST00000511767 DPYDQ12882 1025 aa17.45■□□□□ 0.38
PDLIM5-216ENST00000511767 CBWD2Q8IUF1 395 aa17.45■□□□□ 0.38
PDLIM5-216ENST00000511767 PLCD3Q8N3E9 789 aa17.45■□□□□ 0.38
PDLIM5-216ENST00000511767 KIAA0895Q8NCT3 520 aa17.45■□□□□ 0.38
PDLIM5-216ENST00000511767 PIDD1Q9HB75 910 aa17.45■□□□□ 0.38
PDLIM5-216ENST00000511767 TSHZ2Q9NRE2 1034 aa17.45■□□□□ 0.38
PDLIM5-216ENST00000511767 CGNQ9P2M7 1197 aaKnown RBP17.45■□□□□ 0.38
PDLIM5-216ENST00000511767 UBE4BO95155 1302 aa17.45■□□□□ 0.38
PDLIM5-216ENST00000511767 SEC24AO95486 1093 aa17.44■□□□□ 0.38
PDLIM5-216ENST00000511767 RPN1P04843 607 aaKnown RBP17.44■□□□□ 0.38
PDLIM5-216ENST00000511767 PRR29P0C7W0 189 aa17.44■□□□□ 0.38
PDLIM5-216ENST00000511767 HOXA9P31269 272 aa17.44■□□□□ 0.38
PDLIM5-216ENST00000511767 ARPP19P56211 112 aa17.44■□□□□ 0.38
PDLIM5-216ENST00000511767 YWHAHQ04917 246 aaPredicted RBP17.44■□□□□ 0.38
PDLIM5-216ENST00000511767 SNW1Q13573 536 aaKnown RBP17.44■□□□□ 0.38
PDLIM5-216ENST00000511767 SURF1Q15526 300 aa17.44■□□□□ 0.38
PDLIM5-216ENST00000511767 PPM1LQ5SGD2 360 aa17.44■□□□□ 0.38
PDLIM5-216ENST00000511767 TPGS2Q68CL5 300 aa17.44■□□□□ 0.38
PDLIM5-216ENST00000511767 OTOP3Q7RTS5 596 aa17.44■□□□□ 0.38
PDLIM5-216ENST00000511767 C12orf56Q8IXR9 622 aa17.44■□□□□ 0.38
PDLIM5-216ENST00000511767 TCEAL8Q8IYN2 117 aa17.44■□□□□ 0.38
PDLIM5-216ENST00000511767 FMR1NBQ8N0W7 255 aaPredicted RBP17.44■□□□□ 0.38
PDLIM5-216ENST00000511767 RDH13Q8NBN7 331 aa17.44■□□□□ 0.38
PDLIM5-216ENST00000511767 ENGASEQ8NFI3 743 aa17.44■□□□□ 0.38
PDLIM5-216ENST00000511767 EDAQ92838 391 aa17.44■□□□□ 0.38
PDLIM5-216ENST00000511767 FAM84AQ96KN4 292 aa17.44■□□□□ 0.38
PDLIM5-216ENST00000511767 LRFN3Q9BTN0 628 aa17.44■□□□□ 0.38
PDLIM5-216ENST00000511767 OXCT2Q9BYC2 517 aaPredicted RBP17.44■□□□□ 0.38
PDLIM5-216ENST00000511767 INTS13Q9NVM9 706 aa17.44■□□□□ 0.38
PDLIM5-216ENST00000511767 DMAC2Q9NW81 257 aa17.44■□□□□ 0.38
PDLIM5-216ENST00000511767 TRIOO75962 3097 aa17.44■□□□□ 0.38
PDLIM5-216ENST00000511767 SCN1AP35498 2009 aa17.43■□□□□ 0.38
PDLIM5-216ENST00000511767 ARHGEF37A1IGU5 675 aa17.43■□□□□ 0.38
PDLIM5-216ENST00000511767 CYB561D2O14569 222 aa17.43■□□□□ 0.38
PDLIM5-216ENST00000511767 N4BP1O75113 896 aaKnown RBP17.43■□□□□ 0.38
PDLIM5-216ENST00000511767 CYP11A1P05108 521 aa17.43■□□□□ 0.38
PDLIM5-216ENST00000511767 POU2F2P09086 479 aa17.43■□□□□ 0.38
PDLIM5-216ENST00000511767 TAF6P49848 677 aa17.43■□□□□ 0.38
PDLIM5-216ENST00000511767 LIN9Q5TKA1 542 aa17.43■□□□□ 0.38
PDLIM5-216ENST00000511767 ZNF280DQ6N043 979 aa17.43■□□□□ 0.38
PDLIM5-216ENST00000511767 CCDC149Q6ZUS6 474 aa17.43■□□□□ 0.38
PDLIM5-216ENST00000511767 HS2ST1Q7LGA3 356 aa17.43■□□□□ 0.38
PDLIM5-216ENST00000511767 USP37Q86T82 979 aa17.43■□□□□ 0.38
PDLIM5-216ENST00000511767 CSGALNACT2Q8N6G5 542 aa17.43■□□□□ 0.38
PDLIM5-216ENST00000511767 C1orf127Q8N9H9 656 aa17.43■□□□□ 0.38
PDLIM5-216ENST00000511767 XXYLT1Q8NBI6 393 aa17.43■□□□□ 0.38
PDLIM5-216ENST00000511767 SLC7A14Q8TBB6 771 aa17.43■□□□□ 0.38
PDLIM5-216ENST00000511767 NOC3LQ8WTT2 800 aaKnown RBP17.43■□□□□ 0.38
PDLIM5-216ENST00000511767 TMEM174Q8WUU8 243 aa17.43■□□□□ 0.38
PDLIM5-216ENST00000511767 MFSD14AQ96MC6 490 aa17.43■□□□□ 0.38
PDLIM5-216ENST00000511767 EXOC1Q9NV70 894 aa17.43■□□□□ 0.38
PDLIM5-216ENST00000511767 AFF4Q9UHB7 1163 aaKnown RBP17.43■□□□□ 0.38
PDLIM5-216ENST00000511767 MAFFQ9ULX9 164 aa17.43■□□□□ 0.38
PDLIM5-216ENST00000511767 AGAP1Q9UPQ3 857 aa17.43■□□□□ 0.38
PDLIM5-216ENST00000511767 ANK1P16157 1881 aa17.43■□□□□ 0.38
PDLIM5-216ENST00000511767 KPNA7A9QM74 516 aa17.42■□□□□ 0.38
PDLIM5-216ENST00000511767 TULP1O00294 542 aaPredicted RBP17.42■□□□□ 0.38
PDLIM5-216ENST00000511767 CCL16O15467 120 aa17.42■□□□□ 0.38
PDLIM5-216ENST00000511767 RHOBTB3O94955 611 aa17.42■□□□□ 0.38
PDLIM5-216ENST00000511767 ELF1P32519 619 aa17.42■□□□□ 0.38
PDLIM5-216ENST00000511767 RBP5P82980 135 aa17.42■□□□□ 0.38
PDLIM5-216ENST00000511767 ZXDAP98168 799 aa17.42■□□□□ 0.38
PDLIM5-216ENST00000511767 GPR17Q13304 367 aa17.42■□□□□ 0.38
PDLIM5-216ENST00000511767 DUOXA2Q1HG44 320 aa17.42■□□□□ 0.38
PDLIM5-216ENST00000511767 OVOS1Q6IE37 1185 aa17.42■□□□□ 0.38
PDLIM5-216ENST00000511767 GRASPQ7Z6J2 395 aaPredicted RBP17.42■□□□□ 0.38
PDLIM5-216ENST00000511767 OR5B17Q8NGF7 314 aa17.42■□□□□ 0.38
PDLIM5-216ENST00000511767 ACSF2Q96CM8 615 aaPredicted RBP17.42■□□□□ 0.38
PDLIM5-216ENST00000511767 KCTD10Q9H3F6 313 aa17.42■□□□□ 0.38
PDLIM5-216ENST00000511767 DNMT3BQ9UBC3 853 aaKnown RBP17.42■□□□□ 0.38
PDLIM5-216ENST00000511767 SIX4Q9UIU6 781 aa17.42■□□□□ 0.38
PDLIM5-216ENST00000511767 CIZ1Q9ULV3 898 aaPredicted RBP17.42■□□□□ 0.38
PDLIM5-216ENST00000511767 GOLGA6L4A6NEF3 574 aa17.41■□□□□ 0.38
PDLIM5-216ENST00000511767 OR6C75A6NL08 312 aa17.41■□□□□ 0.38
PDLIM5-216ENST00000511767 PDXKO00764 312 aa17.41■□□□□ 0.38
PDLIM5-216ENST00000511767 VNN2O95498 520 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms