RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 LXNQ9BS40 222 aa6.06□□□□□ -1.44
USP38-203ENST00000511739 CATSPERBQ9H7T0 1116 aa6.06□□□□□ -1.44
USP38-203ENST00000511739 WDR41Q9HAD4 459 aa6.06□□□□□ -1.44
USP38-203ENST00000511739 SH3GLB2Q9NR46 395 aa6.06□□□□□ -1.44
USP38-203ENST00000511739 ARHGEF38Q9NXL2 777 aa6.06□□□□□ -1.44
USP38-203ENST00000511739 ZFATQ9P243 1243 aa6.06□□□□□ -1.44
USP38-203ENST00000511739 DUX4Q9UBX2 424 aa6.06□□□□□ -1.44
USP38-203ENST00000511739 NAGPAQ9UK23 515 aa6.06□□□□□ -1.44
USP38-203ENST00000511739 SALL3Q9BXA9 1300 aa6.06□□□□□ -1.44
USP38-203ENST00000511739 TADA3O75528 432 aa6.06□□□□□ -1.44
USP38-203ENST00000511739 RASSF9O75901 435 aa6.06□□□□□ -1.44
USP38-203ENST00000511739 CKMP06732 381 aa6.06□□□□□ -1.44
USP38-203ENST00000511739 VCAM1P19320 739 aa6.06□□□□□ -1.44
USP38-203ENST00000511739 TNNI3P19429 210 aa6.06□□□□□ -1.44
USP38-203ENST00000511739 KIF23Q02241 960 aaPredicted RBP6.06□□□□□ -1.44
USP38-203ENST00000511739 TAP1Q03518 808 aa6.06□□□□□ -1.44
USP38-203ENST00000511739 PDIA6Q15084 440 aa6.06□□□□□ -1.44
USP38-203ENST00000511739 PCSK7Q16549 785 aa6.06□□□□□ -1.44
USP38-203ENST00000511739 SV2CQ496J9 727 aa6.06□□□□□ -1.44
USP38-203ENST00000511739 LVRNQ6Q4G3 990 aa6.06□□□□□ -1.44
USP38-203ENST00000511739 ENOSF1Q7L5Y1 443 aa6.06□□□□□ -1.44
USP38-203ENST00000511739 TMC7Q7Z402 723 aa6.06□□□□□ -1.44
USP38-203ENST00000511739 GRAMD1CQ8IYS0 662 aa6.06□□□□□ -1.44
USP38-203ENST00000511739 SCFD2Q8WU76 684 aa6.06□□□□□ -1.44
USP38-203ENST00000511739 SPACA7Q96KW9 195 aa6.06□□□□□ -1.44
USP38-203ENST00000511739 SAMSN1Q9NSI8 373 aaKnown RBP6.06□□□□□ -1.44
USP38-203ENST00000511739 SPTLC3Q9NUV7 552 aa6.06□□□□□ -1.44
USP38-203ENST00000511739 SYBUQ9NX95 663 aa6.06□□□□□ -1.44
USP38-203ENST00000511739 NDE1Q9NXR1 346 aa6.06□□□□□ -1.44
USP38-203ENST00000511739 PNMA8BQ9ULN7 279 aaPredicted RBP6.06□□□□□ -1.44
USP38-203ENST00000511739 AKAP12Q02952 1782 aa6.06□□□□□ -1.44
USP38-203ENST00000511739 ITIH6Q6UXX5 1313 aa6.06□□□□□ -1.44
USP38-203ENST00000511739 MYO1GB0I1T2 1018 aa6.06□□□□□ -1.44
USP38-203ENST00000511739 P4HA2O15460 535 aa6.06□□□□□ -1.44
USP38-203ENST00000511739 RAG1P15918 1043 aa6.06□□□□□ -1.44
USP38-203ENST00000511739 CSE1LP55060 971 aaKnown RBP6.06□□□□□ -1.44
USP38-203ENST00000511739 CAV1Q03135 178 aa6.06□□□□□ -1.44
USP38-203ENST00000511739 GABPB1Q06547 395 aaPredicted RBP6.06□□□□□ -1.44
USP38-203ENST00000511739 CDC16Q13042 620 aa6.06□□□□□ -1.44
USP38-203ENST00000511739 GPS1Q13098 491 aa6.06□□□□□ -1.44
USP38-203ENST00000511739 CAMK2GQ13555 558 aaPredicted RBP6.06□□□□□ -1.44
USP38-203ENST00000511739 DGKDQ16760 1214 aa6.06□□□□□ -1.44
USP38-203ENST00000511739 C11orf74Q86VG3 221 aa6.06□□□□□ -1.44
USP38-203ENST00000511739 ZBED8Q8IZ13 594 aa6.06□□□□□ -1.44
USP38-203ENST00000511739 ZSCAN18Q8TBC5 510 aaPredicted RBP6.06□□□□□ -1.44
USP38-203ENST00000511739 SPATA18Q8TC71 538 aa6.06□□□□□ -1.44
USP38-203ENST00000511739 SEPT1Q8WYJ6 367 aa6.06□□□□□ -1.44
USP38-203ENST00000511739 OSBPL6Q9BZF3 934 aa6.06□□□□□ -1.44
USP38-203ENST00000511739 PUS7LQ9H0K6 701 aaKnown RBP6.06□□□□□ -1.44
USP38-203ENST00000511739 GID8Q9NWU2 228 aa6.06□□□□□ -1.44
USP38-203ENST00000511739 GGA3Q9NZ52 723 aa6.06□□□□□ -1.44
USP38-203ENST00000511739 PCDHB12Q9Y5F1 795 aa6.06□□□□□ -1.44
USP38-203ENST00000511739 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.06□□□□□ -1.44
USP38-203ENST00000511739 TRIM16O95361 564 aa6.06□□□□□ -1.44
USP38-203ENST00000511739 MYBL1P10243 752 aa6.06□□□□□ -1.44
USP38-203ENST00000511739 CHRNA5P30532 468 aa6.06□□□□□ -1.44
USP38-203ENST00000511739 THPOP40225 353 aa6.06□□□□□ -1.44
USP38-203ENST00000511739 SLC11A2P49281 568 aa6.06□□□□□ -1.44
USP38-203ENST00000511739 SESN2P58004 480 aaPredicted RBP6.06□□□□□ -1.44
USP38-203ENST00000511739 ZNF177Q13360 481 aaPredicted RBP6.06□□□□□ -1.44
USP38-203ENST00000511739 PTPAQ15257 358 aa6.06□□□□□ -1.44
USP38-203ENST00000511739 TKFCQ3LXA3 575 aa6.06□□□□□ -1.44
USP38-203ENST00000511739 ANGEL2Q5VTE6 544 aaKnown RBP6.06□□□□□ -1.44
USP38-203ENST00000511739 ARL6IP4Q66PJ3 421 aaKnown RBP6.06□□□□□ -1.44
USP38-203ENST00000511739 PI16Q6UXB8 463 aa6.06□□□□□ -1.44
USP38-203ENST00000511739 UNC13DQ70J99 1090 aa6.06□□□□□ -1.44
USP38-203ENST00000511739 ATG9AQ7Z3C6 839 aa6.06□□□□□ -1.44
USP38-203ENST00000511739 ZC3H18Q86VM9 953 aaKnown RBP6.06□□□□□ -1.44
USP38-203ENST00000511739 ARMC2Q8NEN0 867 aa6.06□□□□□ -1.44
USP38-203ENST00000511739 ZNF564Q8TBZ8 553 aaPredicted RBP6.06□□□□□ -1.44
USP38-203ENST00000511739 AGR3Q8TD06 166 aa6.06□□□□□ -1.44
USP38-203ENST00000511739 ELMO2Q96JJ3 720 aa6.06□□□□□ -1.44
USP38-203ENST00000511739 CALR3Q96L12 384 aaKnown RBP6.06□□□□□ -1.44
USP38-203ENST00000511739 NUP85Q9BW27 656 aa6.06□□□□□ -1.44
USP38-203ENST00000511739 THG1LQ9NWX6 298 aaKnown RBP6.06□□□□□ -1.44
USP38-203ENST00000511739 USE1Q9NZ43 259 aa6.06□□□□□ -1.44
USP38-203ENST00000511739 FRMD3A2A2Y4 597 aa6.06□□□□□ -1.44
USP38-203ENST00000511739 LRRC14BA6NHZ5 514 aa6.06□□□□□ -1.44
USP38-203ENST00000511739 SLC25A27O95847 323 aa6.06□□□□□ -1.44
USP38-203ENST00000511739 ASS1P00966 412 aaKnown RBP6.06□□□□□ -1.44
USP38-203ENST00000511739 MBL2P11226 248 aaPredicted RBP6.06□□□□□ -1.44
USP38-203ENST00000511739 GPC1P35052 558 aa6.06□□□□□ -1.44
USP38-203ENST00000511739 ALDH18A1P54886 795 aaKnown RBP6.06□□□□□ -1.44
USP38-203ENST00000511739 CNTN1Q12860 1018 aa6.06□□□□□ -1.44
USP38-203ENST00000511739 CCDC142Q17RM4 750 aa6.06□□□□□ -1.44
USP38-203ENST00000511739 C1orf146Q5VVC0 180 aa6.06□□□□□ -1.44
USP38-203ENST00000511739 RGS9BPQ6ZS82 235 aa6.06□□□□□ -1.44
USP38-203ENST00000511739 LDHDQ86WU2 507 aa6.06□□□□□ -1.44
USP38-203ENST00000511739 SYTL1Q8IYJ3 562 aa6.06□□□□□ -1.44
USP38-203ENST00000511739 ZNF280CQ8ND82 737 aa6.06□□□□□ -1.44
USP38-203ENST00000511739 SPIRE2Q8WWL2 714 aa6.06□□□□□ -1.44
USP38-203ENST00000511739 CEP95Q96GE4 821 aa6.06□□□□□ -1.44
USP38-203ENST00000511739 CHST12Q9NRB3 414 aa6.06□□□□□ -1.44
USP38-203ENST00000511739 ABI2Q9NYB9 513 aaPredicted RBP6.06□□□□□ -1.44
USP38-203ENST00000511739 MAN1B1Q9UKM7 699 aa6.06□□□□□ -1.44
USP38-203ENST00000511739 POTEMA6NI47 508 aa6.05□□□□□ -1.44
USP38-203ENST00000511739 LARGE1O95461 756 aa6.05□□□□□ -1.44
USP38-203ENST00000511739 CHRM3P20309 590 aa6.05□□□□□ -1.44
USP38-203ENST00000511739 ETFBP38117 255 aa6.05□□□□□ -1.44
USP38-203ENST00000511739 MCAMP43121 646 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms