RNA–Protein interactions for RNA: ENST00000511313.5

POLR2J3-215, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best) BASIC

Gene POLR2J3, Length 4,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-215ENST00000511313 IER2Q9BTL4 223 aa10.27□□□□□ -0.77
POLR2J3-215ENST00000511313 NKX2-4Q9H2Z4 354 aa10.27□□□□□ -0.77
POLR2J3-215ENST00000511313 PCIF1Q9H4Z3 704 aa10.27□□□□□ -0.77
POLR2J3-215ENST00000511313 DOLKQ9UPQ8 538 aa10.27□□□□□ -0.77
POLR2J3-215ENST00000511313 IKBKGQ9Y6K9 419 aa10.27□□□□□ -0.77
POLR2J3-215ENST00000511313 MYH14Q7Z406 1995 aaKnown RBP10.27□□□□□ -0.77
POLR2J3-215ENST00000511313 ZNF623O75123 536 aa10.27□□□□□ -0.77
POLR2J3-215ENST00000511313 EZRP15311 586 aaKnown RBP10.27□□□□□ -0.77
POLR2J3-215ENST00000511313 BMP8BP34820 402 aa10.27□□□□□ -0.77
POLR2J3-215ENST00000511313 SNRNP35Q16560 246 aaKnown RBP10.27□□□□□ -0.77
POLR2J3-215ENST00000511313 CCDC122Q5T0U0 273 aa10.27□□□□□ -0.77
POLR2J3-215ENST00000511313 ADAT2Q7Z6V5 191 aaKnown RBP10.27□□□□□ -0.77
POLR2J3-215ENST00000511313 CCDC60Q8IWA6 550 aaPredicted RBP10.27□□□□□ -0.77
POLR2J3-215ENST00000511313 PAGE5Q96GU1 130 aa10.27□□□□□ -0.77
POLR2J3-215ENST00000511313 FUBP3Q96I24 572 aaKnown RBP eCLIP10.27□□□□□ -0.77
POLR2J3-215ENST00000511313 PPP1R16AQ96I34 528 aa10.27□□□□□ -0.77
POLR2J3-215ENST00000511313 MAGEB5Q9BZ81 275 aa10.27□□□□□ -0.77
POLR2J3-215ENST00000511313 CRISPLD2Q9H0B8 497 aa10.27□□□□□ -0.77
POLR2J3-215ENST00000511313 AGPAT5Q9NUQ2 364 aa10.27□□□□□ -0.77
POLR2J3-215ENST00000511313 FAM169AQ9Y6X4 670 aa10.27□□□□□ -0.77
POLR2J3-215ENST00000511313 SIPA1L3O60292 1781 aaPredicted RBP10.27□□□□□ -0.77
POLR2J3-215ENST00000511313 KCNJ18B7U540 433 aa10.26□□□□□ -0.77
POLR2J3-215ENST00000511313 EPHB1P54762 984 aa10.26□□□□□ -0.77
POLR2J3-215ENST00000511313 KCNJ12Q14500 433 aa10.26□□□□□ -0.77
POLR2J3-215ENST00000511313 CYB5D1Q6P9G0 228 aa10.26□□□□□ -0.77
POLR2J3-215ENST00000511313 IRX2Q9BZI1 471 aaPredicted RBP10.26□□□□□ -0.77
POLR2J3-215ENST00000511313 RGS18Q9NS28 235 aa10.26□□□□□ -0.77
POLR2J3-215ENST00000511313 AFF4Q9UHB7 1163 aaKnown RBP10.26□□□□□ -0.77
POLR2J3-215ENST00000511313 BARX2Q9UMQ3 279 aaPredicted RBP10.26□□□□□ -0.77
POLR2J3-215ENST00000511313 RIPK3Q9Y572 518 aa10.26□□□□□ -0.77
POLR2J3-215ENST00000511313 TTLL13PA6NNM8 815 aa10.26□□□□□ -0.77
POLR2J3-215ENST00000511313 MYO1FO00160 1098 aa10.26□□□□□ -0.77
POLR2J3-215ENST00000511313 MTSS1O43312 755 aa10.26□□□□□ -0.77
POLR2J3-215ENST00000511313 ERBB2P04626 1255 aa10.26□□□□□ -0.77
POLR2J3-215ENST00000511313 NPEPPSP55786 919 aa10.26□□□□□ -0.77
POLR2J3-215ENST00000511313 GRSF1Q12849 480 aaKnown RBP eCLIP10.26□□□□□ -0.77
POLR2J3-215ENST00000511313 WDR72Q3MJ13 1102 aa10.26□□□□□ -0.77
POLR2J3-215ENST00000511313 ZNF618Q5T7W0 954 aa10.26□□□□□ -0.77
POLR2J3-215ENST00000511313 PKNOX2Q96KN3 472 aa10.26□□□□□ -0.77
POLR2J3-215ENST00000511313 HERC2P3Q9BVR0 1158 aa10.26□□□□□ -0.77
POLR2J3-215ENST00000511313 SUSD2Q9UGT4 822 aa10.26□□□□□ -0.77
POLR2J3-215ENST00000511313 PDE2AO00408 941 aaPredicted RBP10.26□□□□□ -0.77
POLR2J3-215ENST00000511313 MAGEA10P43363 369 aaPredicted RBP10.26□□□□□ -0.77
POLR2J3-215ENST00000511313 MAPK8P45983 427 aa10.26□□□□□ -0.77
POLR2J3-215ENST00000511313 FMR1Q06787 632 aaKnown RBP eCLIP10.26□□□□□ -0.77
POLR2J3-215ENST00000511313 SYCP2LQ5T4T6 812 aa10.26□□□□□ -0.77
POLR2J3-215ENST00000511313 PPP1R21Q6ZMI0 780 aa10.26□□□□□ -0.77
POLR2J3-215ENST00000511313 MAP4K3Q8IVH8 894 aa10.26□□□□□ -0.77
POLR2J3-215ENST00000511313 OTUB2Q96DC9 234 aa10.26□□□□□ -0.77
POLR2J3-215ENST00000511313 ZFP91Q96JP5 570 aaPredicted RBP10.26□□□□□ -0.77
POLR2J3-215ENST00000511313 REEP2Q9BRK0 252 aa10.26□□□□□ -0.77
POLR2J3-215ENST00000511313 ZDHHC7Q9NXF8 308 aa10.26□□□□□ -0.77
POLR2J3-215ENST00000511313 ABI2Q9NYB9 513 aaPredicted RBP10.26□□□□□ -0.77
POLR2J3-215ENST00000511313 SUN2Q9UH99 717 aa10.26□□□□□ -0.77
POLR2J3-215ENST00000511313 C2CD2LO14523 706 aa10.26□□□□□ -0.77
POLR2J3-215ENST00000511313 UQCRHP07919 91 aa10.26□□□□□ -0.77
POLR2J3-215ENST00000511313 MX2P20592 715 aa10.26□□□□□ -0.77
POLR2J3-215ENST00000511313 RENBPP51606 427 aa10.26□□□□□ -0.77
POLR2J3-215ENST00000511313 PLCB3Q01970 1234 aa10.26□□□□□ -0.77
POLR2J3-215ENST00000511313 ARHGAP44Q17R89 818 aa10.26□□□□□ -0.77
POLR2J3-215ENST00000511313 FOXR2Q6PJQ5 311 aa10.26□□□□□ -0.77
POLR2J3-215ENST00000511313 GPR161Q8N6U8 529 aaKnown RBP10.26□□□□□ -0.77
POLR2J3-215ENST00000511313 MRFAP1Q9Y605 127 aa10.26□□□□□ -0.77
POLR2J3-215ENST00000511313 A0A1W2PQ67 120 aa10.25□□□□□ -0.77
POLR2J3-215ENST00000511313 GSTTP1A0A1W2PQM5 241 aa10.25□□□□□ -0.77
POLR2J3-215ENST00000511313 RECQL4O94761 1208 aa10.25□□□□□ -0.77
POLR2J3-215ENST00000511313 GNSP15586 552 aa10.25□□□□□ -0.77
POLR2J3-215ENST00000511313 FSHRP23945 695 aa10.25□□□□□ -0.77
POLR2J3-215ENST00000511313 NOVP48745 357 aa10.25□□□□□ -0.77
POLR2J3-215ENST00000511313 GTF2H3Q13889 308 aa10.25□□□□□ -0.77
POLR2J3-215ENST00000511313 FUT10Q6P4F1 479 aa10.25□□□□□ -0.77
POLR2J3-215ENST00000511313 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.25□□□□□ -0.77
POLR2J3-215ENST00000511313 LUZP1Q86V48 1076 aa10.25□□□□□ -0.77
POLR2J3-215ENST00000511313 ZSCAN30Q86W11 494 aa10.25□□□□□ -0.77
POLR2J3-215ENST00000511313 TTC13Q8NBP0 860 aa10.25□□□□□ -0.77
POLR2J3-215ENST00000511313 GRK7Q8WTQ7 553 aa10.25□□□□□ -0.77
POLR2J3-215ENST00000511313 CNOT6LQ96LI5 555 aaKnown RBP10.25□□□□□ -0.77
POLR2J3-215ENST00000511313 BLZF1Q9H2G9 400 aa10.25□□□□□ -0.77
POLR2J3-215ENST00000511313 CLIC4Q9Y696 253 aa10.25□□□□□ -0.77
POLR2J3-215ENST00000511313 GOLGA6L10A6NI86 522 aa10.25□□□□□ -0.77
POLR2J3-215ENST00000511313 CNMDO75829 334 aa10.25□□□□□ -0.77
POLR2J3-215ENST00000511313 ACRP10323 421 aa10.25□□□□□ -0.77
POLR2J3-215ENST00000511313 USP4Q13107 963 aa10.25□□□□□ -0.77
POLR2J3-215ENST00000511313 RETSATQ6NUM9 610 aa10.25□□□□□ -0.77
POLR2J3-215ENST00000511313 TTC23LQ6PF05 361 aa10.25□□□□□ -0.77
POLR2J3-215ENST00000511313 DDX53Q86TM3 631 aaKnown RBP10.25□□□□□ -0.77
POLR2J3-215ENST00000511313 TTC30AQ86WT1 665 aa10.25□□□□□ -0.77
POLR2J3-215ENST00000511313 BBOF1Q8ND07 529 aa10.25□□□□□ -0.77
POLR2J3-215ENST00000511313 CPLX3Q8WVH0 158 aa10.25□□□□□ -0.77
POLR2J3-215ENST00000511313 GAD1Q99259 594 aa10.25□□□□□ -0.77
POLR2J3-215ENST00000511313 ST6GALNAC4Q9H4F1 302 aa10.25□□□□□ -0.77
POLR2J3-215ENST00000511313 WDR6Q9NNW5 1121 aaKnown RBP10.25□□□□□ -0.77
POLR2J3-215ENST00000511313 TRMT13Q9NUP7 481 aaKnown RBP10.25□□□□□ -0.77
POLR2J3-215ENST00000511313 MAST2Q6P0Q8 1798 aa10.25□□□□□ -0.77
POLR2J3-215ENST00000511313 AKR1B15C9JRZ8 316 aaPredicted RBP10.25□□□□□ -0.77
POLR2J3-215ENST00000511313 TIMM44O43615 452 aa10.25□□□□□ -0.77
POLR2J3-215ENST00000511313 H2AFZP0C0S5 128 aa10.25□□□□□ -0.77
POLR2J3-215ENST00000511313 TYRO3Q06418 890 aa10.25□□□□□ -0.77
POLR2J3-215ENST00000511313 SUZ12Q15022 739 aaKnown RBP10.25□□□□□ -0.77
POLR2J3-215ENST00000511313 DGKKQ5KSL6 1271 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms