RNA–Protein interactions for RNA: ENST00000510951.5

NR1I3-227, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 774 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-227ENST00000510951 CBWD3Q5JTY5 395 aa11.21□□□□□ -0.61
NR1I3-227ENST00000510951 RTP2Q5QGT7 225 aa11.21□□□□□ -0.61
NR1I3-227ENST00000510951 CBWD5Q5RIA9 395 aa11.21□□□□□ -0.61
NR1I3-227ENST00000510951 KIAA1841Q6NSI8 718 aa11.21□□□□□ -0.61
NR1I3-227ENST00000510951 PRSS55Q6UWB4 352 aaPredicted RBP11.21□□□□□ -0.61
NR1I3-227ENST00000510951 SV2AQ7L0J3 742 aa11.21□□□□□ -0.61
NR1I3-227ENST00000510951 FRMD5Q7Z6J6 570 aa11.21□□□□□ -0.61
NR1I3-227ENST00000510951 ADGRD2Q7Z7M1 963 aa11.21□□□□□ -0.61
NR1I3-227ENST00000510951 IRF2BP1Q8IU81 584 aa11.21□□□□□ -0.61
NR1I3-227ENST00000510951 RNF168Q8IYW5 571 aaPredicted RBP11.21□□□□□ -0.61
NR1I3-227ENST00000510951 RIN2Q8WYP3 895 aaPredicted RBP11.21□□□□□ -0.61
NR1I3-227ENST00000510951 SLC35C1Q96A29 364 aa11.21□□□□□ -0.61
NR1I3-227ENST00000510951 HPDLQ96IR7 371 aa11.21□□□□□ -0.61
NR1I3-227ENST00000510951 NAT10Q9H0A0 1025 aaKnown RBP11.21□□□□□ -0.61
NR1I3-227ENST00000510951 LMAN2LQ9H0V9 348 aa11.21□□□□□ -0.61
NR1I3-227ENST00000510951 THAP9Q9H5L6 903 aa11.21□□□□□ -0.61
NR1I3-227ENST00000510951 METTL14Q9HCE5 456 aaKnown RBP11.21□□□□□ -0.61
NR1I3-227ENST00000510951 TMEM8AQ9HCN3 771 aa11.21□□□□□ -0.61
NR1I3-227ENST00000510951 MAGEC2Q9UBF1 373 aaPredicted RBP11.21□□□□□ -0.61
NR1I3-227ENST00000510951 TIMM13Q9Y5L4 95 aaPredicted RBP11.21□□□□□ -0.61
NR1I3-227ENST00000510951 MYH10P35580 1976 aa11.21□□□□□ -0.62
NR1I3-227ENST00000510951 BRWD1Q9NSI6 2320 aa11.2□□□□□ -0.62
NR1I3-227ENST00000510951 HIDE1A8MVS5 230 aa11.2□□□□□ -0.62
NR1I3-227ENST00000510951 KCNJ18B7U540 433 aa11.2□□□□□ -0.62
NR1I3-227ENST00000510951 IKBKBO14920 756 aa11.2□□□□□ -0.62
NR1I3-227ENST00000510951 FSCN2O14926 492 aa11.2□□□□□ -0.62
NR1I3-227ENST00000510951 TRAPPC3O43617 180 aa11.2□□□□□ -0.62
NR1I3-227ENST00000510951 STX10O60499 249 aa11.2□□□□□ -0.62
NR1I3-227ENST00000510951 EFEMP2O95967 443 aa11.2□□□□□ -0.62
NR1I3-227ENST00000510951 CST3P01034 146 aaPredicted RBP11.2□□□□□ -0.62
NR1I3-227ENST00000510951 HLA-DRAP01903 254 aa11.2□□□□□ -0.62
NR1I3-227ENST00000510951 CTSAP10619 480 aa11.2□□□□□ -0.62
NR1I3-227ENST00000510951 PNPLA4P41247 253 aa11.2□□□□□ -0.62
NR1I3-227ENST00000510951 AARSP49588 968 aaKnown RBP eCLIP11.2□□□□□ -0.62
NR1I3-227ENST00000510951 ZNF165P49910 485 aa11.2□□□□□ -0.62
NR1I3-227ENST00000510951 AP3M2P53677 418 aa11.2□□□□□ -0.62
NR1I3-227ENST00000510951 MYL7Q01449 175 aa11.2□□□□□ -0.62
NR1I3-227ENST00000510951 ELAVL2Q12926 359 aaKnown RBP11.2□□□□□ -0.62
NR1I3-227ENST00000510951 KCNJ12Q14500 433 aa11.2□□□□□ -0.62
NR1I3-227ENST00000510951 SMC1AQ14683 1233 aaKnown RBP11.2□□□□□ -0.62
NR1I3-227ENST00000510951 PTPN14Q15678 1187 aa11.2□□□□□ -0.62
NR1I3-227ENST00000510951 ZNF699Q32M78 642 aa11.2□□□□□ -0.62
NR1I3-227ENST00000510951 USP41Q3LFD5 358 aa11.2□□□□□ -0.62
NR1I3-227ENST00000510951 SPOPLQ6IQ16 392 aa11.2□□□□□ -0.62
NR1I3-227ENST00000510951 SCARA5Q6ZMJ2 495 aa11.2□□□□□ -0.62
NR1I3-227ENST00000510951 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.2□□□□□ -0.62
NR1I3-227ENST00000510951 C15orf39Q6ZRI6 1047 aa11.2□□□□□ -0.62
NR1I3-227ENST00000510951 RBM23Q86U06 439 aaKnown RBP11.2□□□□□ -0.62
NR1I3-227ENST00000510951 GLYCTKQ8IVS8 523 aa11.2□□□□□ -0.62
NR1I3-227ENST00000510951 FAM114A1Q8IWE2 563 aa11.2□□□□□ -0.62
NR1I3-227ENST00000510951 TRIM59Q8IWR1 403 aa11.2□□□□□ -0.62
NR1I3-227ENST00000510951 LRRC52Q8N7C0 313 aa11.2□□□□□ -0.62
NR1I3-227ENST00000510951 ENOX1Q8TC92 643 aaKnown RBP11.2□□□□□ -0.62
NR1I3-227ENST00000510951 TAS1R2Q8TE23 839 aa11.2□□□□□ -0.62
NR1I3-227ENST00000510951 SUSD3Q96L08 255 aa11.2□□□□□ -0.62
NR1I3-227ENST00000510951 SENP8Q96LD8 212 aa11.2□□□□□ -0.62
NR1I3-227ENST00000510951 PI4K2AQ9BTU6 479 aa11.2□□□□□ -0.62
NR1I3-227ENST00000510951 TTPALQ9BTX7 342 aa11.2□□□□□ -0.62
NR1I3-227ENST00000510951 MRPL17Q9NRX2 175 aaKnown RBP11.2□□□□□ -0.62
NR1I3-227ENST00000510951 FANCLQ9NW38 375 aa11.2□□□□□ -0.62
NR1I3-227ENST00000510951 PCDHB8Q9UN66 801 aa11.2□□□□□ -0.62
NR1I3-227ENST00000510951 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.2□□□□□ -0.62
NR1I3-227ENST00000510951 SNX9Q9Y5X1 595 aa11.2□□□□□ -0.62
NR1I3-227ENST00000510951 MTCH2Q9Y6C9 303 aa11.2□□□□□ -0.62
NR1I3-227ENST00000510951 C2orf71A6NGG8 1288 aa11.19□□□□□ -0.62
NR1I3-227ENST00000510951 KPNA7A9QM74 516 aa11.19□□□□□ -0.62
NR1I3-227ENST00000510951 CYB561D2O14569 222 aa11.19□□□□□ -0.62
NR1I3-227ENST00000510951 PER2O15055 1255 aa11.19□□□□□ -0.62
NR1I3-227ENST00000510951 LRRN2O75325 713 aa11.19□□□□□ -0.62
NR1I3-227ENST00000510951 CXCL14O95715 111 aa11.19□□□□□ -0.62
NR1I3-227ENST00000510951 ODC1P11926 461 aa11.19□□□□□ -0.62
NR1I3-227ENST00000510951 RPL17P18621 184 aaKnown RBP11.19□□□□□ -0.62
NR1I3-227ENST00000510951 FGFR3P22607 806 aa11.19□□□□□ -0.62
NR1I3-227ENST00000510951 GTF2H1P32780 548 aa11.19□□□□□ -0.62
NR1I3-227ENST00000510951 FMO5P49326 533 aa11.19□□□□□ -0.62
NR1I3-227ENST00000510951 MARSP56192 900 aaKnown RBP11.19□□□□□ -0.62
NR1I3-227ENST00000510951 DSG1Q02413 1049 aa11.19□□□□□ -0.62
NR1I3-227ENST00000510951 ENPEPQ07075 957 aa11.19□□□□□ -0.62
NR1I3-227ENST00000510951 MYO1EQ12965 1108 aa11.19□□□□□ -0.62
NR1I3-227ENST00000510951 BMS1Q14692 1282 aaKnown RBP11.19□□□□□ -0.62
NR1I3-227ENST00000510951 CCDC85BQ15834 202 aaPredicted RBP11.19□□□□□ -0.62
NR1I3-227ENST00000510951 PSMD5Q16401 504 aa11.19□□□□□ -0.62
NR1I3-227ENST00000510951 TCEAL5Q5H9L2 206 aa11.19□□□□□ -0.62
NR1I3-227ENST00000510951 VARS2Q5ST30 1063 aaKnown RBP11.19□□□□□ -0.62
NR1I3-227ENST00000510951 KRT39Q6A163 491 aa11.19□□□□□ -0.62
NR1I3-227ENST00000510951 DHX40Q8IX18 779 aaKnown RBP11.19□□□□□ -0.62
NR1I3-227ENST00000510951 PPM1EQ8WY54 764 aa11.19□□□□□ -0.62
NR1I3-227ENST00000510951 NSUN3Q9H649 340 aaKnown RBP11.19□□□□□ -0.62
NR1I3-227ENST00000510951 TAB2Q9NYJ8 693 aa11.19□□□□□ -0.62
NR1I3-227ENST00000510951 STK39Q9UEW8 545 aa11.19□□□□□ -0.62
NR1I3-227ENST00000510951 POLIQ9UNA4 740 aa11.19□□□□□ -0.62
NR1I3-227ENST00000510951 PTPRDP23468 1912 aa11.19□□□□□ -0.62
NR1I3-227ENST00000510951 REV3LO60673 3130 aa11.18□□□□□ -0.62
NR1I3-227ENST00000510951 M0QZQ0 153 aa11.18□□□□□ -0.62
NR1I3-227ENST00000510951 PES1O00541 588 aaKnown RBP11.18□□□□□ -0.62
NR1I3-227ENST00000510951 SYN3O14994 580 aa11.18□□□□□ -0.62
NR1I3-227ENST00000510951 AFPP02771 609 aaKnown RBP11.18□□□□□ -0.62
NR1I3-227ENST00000510951 PRKCSHP14314 528 aaPredicted RBP11.18□□□□□ -0.62
NR1I3-227ENST00000510951 GTF2F1P35269 517 aaKnown RBP eCLIP11.18□□□□□ -0.62
NR1I3-227ENST00000510951 RAP1GAPP47736 663 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms