RNA–Protein interactions for RNA: ENST00000510877.5

LIN54-210, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 4,507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-210ENST00000510877 VAMP7P51809 220 aa13.28□□□□□ -0.28
LIN54-210ENST00000510877 OTUD6BQ8N6M0 293 aa13.28□□□□□ -0.28
LIN54-210ENST00000510877 COLGALT1Q8NBJ5 622 aa13.28□□□□□ -0.28
LIN54-210ENST00000510877 PIK3R5Q8WYR1 880 aa13.28□□□□□ -0.28
LIN54-210ENST00000510877 SFXN1Q9H9B4 322 aa13.28□□□□□ -0.28
LIN54-210ENST00000510877 MAN1C1Q9NR34 630 aa13.28□□□□□ -0.28
LIN54-210ENST00000510877 RASAL2Q9UJF2 1139 aa13.28□□□□□ -0.28
LIN54-210ENST00000510877 USP18Q9UMW8 372 aa13.28□□□□□ -0.28
LIN54-210ENST00000510877 ANKRD31Q8N7Z5 1873 aa13.28□□□□□ -0.28
LIN54-210ENST00000510877 TRAV19A0A0A6YYK7 116 aa13.28□□□□□ -0.28
LIN54-210ENST00000510877 ZBTB39O15060 712 aa13.28□□□□□ -0.28
LIN54-210ENST00000510877 U2AF2P26368 475 aaKnown RBP eCLIP13.28□□□□□ -0.28
LIN54-210ENST00000510877 ADCY1Q08828 1119 aa13.28□□□□□ -0.28
LIN54-210ENST00000510877 SNRNP35Q16560 246 aaKnown RBP13.28□□□□□ -0.28
LIN54-210ENST00000510877 TMEM31Q5JXX7 168 aa13.28□□□□□ -0.28
LIN54-210ENST00000510877 GPIHBP1Q8IV16 184 aa13.28□□□□□ -0.28
LIN54-210ENST00000510877 FBXL18Q96ME1 805 aa13.28□□□□□ -0.28
LIN54-210ENST00000510877 AGPAT5Q9NUQ2 364 aa13.28□□□□□ -0.28
LIN54-210ENST00000510877 CYP3A7-CYP3A51PA0A087WV96 503 aa13.28□□□□□ -0.28
LIN54-210ENST00000510877 EIF4E1BA6NMX2 242 aaKnown RBP13.28□□□□□ -0.28
LIN54-210ENST00000510877 RPL17P18621 184 aaKnown RBP13.28□□□□□ -0.28
LIN54-210ENST00000510877 CYP3A7P24462 503 aa13.28□□□□□ -0.28
LIN54-210ENST00000510877 BRCC3P46736 316 aa13.28□□□□□ -0.28
LIN54-210ENST00000510877 GATMP50440 423 aa13.28□□□□□ -0.28
LIN54-210ENST00000510877 PNOCQ13519 176 aa13.28□□□□□ -0.28
LIN54-210ENST00000510877 ARL13BQ3SXY8 428 aa13.28□□□□□ -0.28
LIN54-210ENST00000510877 SPIRE2Q8WWL2 714 aa13.28□□□□□ -0.28
LIN54-210ENST00000510877 TAF4BQ92750 862 aa13.28□□□□□ -0.28
LIN54-210ENST00000510877 FAM204AQ9H8W3 233 aa13.28□□□□□ -0.28
LIN54-210ENST00000510877 AGO3Q9H9G7 860 aaKnown RBP13.28□□□□□ -0.28
LIN54-210ENST00000510877 DONSONQ9NYP3 566 aa13.28□□□□□ -0.28
LIN54-210ENST00000510877 DOLKQ9UPQ8 538 aa13.28□□□□□ -0.28
LIN54-210ENST00000510877 GUCY2CP25092 1073 aa13.27□□□□□ -0.28
LIN54-210ENST00000510877 GRB10Q13322 594 aa13.27□□□□□ -0.28
LIN54-210ENST00000510877 SGO2Q562F6 1265 aa13.27□□□□□ -0.28
LIN54-210ENST00000510877 PLEKHG4Q58EX7 1191 aa13.27□□□□□ -0.28
LIN54-210ENST00000510877 KRT39Q6A163 491 aa13.27□□□□□ -0.28
LIN54-210ENST00000510877 ARHGAP18Q8N392 663 aa13.27□□□□□ -0.28
LIN54-210ENST00000510877 CHAMP1Q96JM3 812 aa13.27□□□□□ -0.28
LIN54-210ENST00000510877 GSDMAQ96QA5 445 aa13.27□□□□□ -0.28
LIN54-210ENST00000510877 TMEM175Q9BSA9 504 aa13.27□□□□□ -0.28
LIN54-210ENST00000510877 PLA2G4CQ9UP65 541 aa13.27□□□□□ -0.28
LIN54-210ENST00000510877 A6NNZ2 444 aa13.27□□□□□ -0.28
LIN54-210ENST00000510877 CCDC175P0C221 793 aa13.27□□□□□ -0.28
LIN54-210ENST00000510877 ZNF165P49910 485 aa13.27□□□□□ -0.28
LIN54-210ENST00000510877 EXOC3L4Q17RC7 722 aa13.27□□□□□ -0.28
LIN54-210ENST00000510877 TUBB8Q3ZCM7 444 aa13.27□□□□□ -0.28
LIN54-210ENST00000510877 SPECC1LQ69YQ0 1117 aa13.27□□□□□ -0.28
LIN54-210ENST00000510877 CCDC50Q8IVM0 306 aa13.27□□□□□ -0.28
LIN54-210ENST00000510877 KAT2BQ92831 832 aa13.27□□□□□ -0.28
LIN54-210ENST00000510877 SYT15Q9BQS2 421 aa13.27□□□□□ -0.28
LIN54-210ENST00000510877 PI4K2AQ9BTU6 479 aa13.27□□□□□ -0.28
LIN54-210ENST00000510877 SPON2Q9BUD6 331 aa13.27□□□□□ -0.28
LIN54-210ENST00000510877 NT5C1AQ9BXI3 368 aa13.27□□□□□ -0.28
LIN54-210ENST00000510877 GPR88Q9GZN0 384 aa13.27□□□□□ -0.28
LIN54-210ENST00000510877 LINC01553A4QN01 128 aa13.27□□□□□ -0.29
LIN54-210ENST00000510877 ARL5CA6NH57 179 aa13.27□□□□□ -0.29
LIN54-210ENST00000510877 B4GALT5O43286 388 aa13.27□□□□□ -0.29
LIN54-210ENST00000510877 NDUFS2O75306 463 aa13.27□□□□□ -0.29
LIN54-210ENST00000510877 AP1G2O75843 785 aa13.27□□□□□ -0.29
LIN54-210ENST00000510877 HDCP19113 662 aa13.27□□□□□ -0.29
LIN54-210ENST00000510877 TBXAS1P24557 533 aaPredicted RBP13.27□□□□□ -0.29
LIN54-210ENST00000510877 ITIH3Q06033 890 aa13.27□□□□□ -0.29
LIN54-210ENST00000510877 GPR158Q5T848 1215 aa13.27□□□□□ -0.29
LIN54-210ENST00000510877 C12orf76Q8N812 135 aaPredicted RBP13.27□□□□□ -0.29
LIN54-210ENST00000510877 VPS16Q9H269 839 aa13.27□□□□□ -0.29
LIN54-210ENST00000510877 FAM49BQ9NUQ9 324 aa13.27□□□□□ -0.29
LIN54-210ENST00000510877 LIMD1Q9UGP4 676 aa13.27□□□□□ -0.29
LIN54-210ENST00000510877 HPCAL4Q9UM19 191 aa13.27□□□□□ -0.29
LIN54-210ENST00000510877 ANKRD36CQ5JPF3 1778 aa13.27□□□□□ -0.29
LIN54-210ENST00000510877 INPPL1O15357 1258 aa13.27□□□□□ -0.29
LIN54-210ENST00000510877 RNF8O76064 485 aa13.27□□□□□ -0.29
LIN54-210ENST00000510877 WEE2P0C1S8 567 aa13.27□□□□□ -0.29
LIN54-210ENST00000510877 STAT1P42224 750 aa13.27□□□□□ -0.29
LIN54-210ENST00000510877 LRIT3Q3SXY7 679 aa13.27□□□□□ -0.29
LIN54-210ENST00000510877 AP1ARQ63HQ0 302 aa13.27□□□□□ -0.29
LIN54-210ENST00000510877 TIAM2Q8IVF5 1701 aa13.26□□□□□ -0.29
LIN54-210ENST00000510877 ACO1P21399 889 aaKnown RBP13.26□□□□□ -0.29
LIN54-210ENST00000510877 VWA3BQ502W6 1294 aa13.26□□□□□ -0.29
LIN54-210ENST00000510877 MIB1Q86YT6 1006 aa13.26□□□□□ -0.29
LIN54-210ENST00000510877 DHX38Q92620 1227 aaKnown RBP13.26□□□□□ -0.29
LIN54-210ENST00000510877 BCAS3Q9H6U6 928 aa13.26□□□□□ -0.29
LIN54-210ENST00000510877 TMEM134Q9H6X4 195 aa13.26□□□□□ -0.29
LIN54-210ENST00000510877 ELAC1Q9H777 363 aaKnown RBP13.26□□□□□ -0.29
LIN54-210ENST00000510877 PLEKHA5Q9HAU0 1116 aa13.26□□□□□ -0.29
LIN54-210ENST00000510877 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.26□□□□□ -0.29
LIN54-210ENST00000510877 GOLGA6CA6NDK9 693 aa13.26□□□□□ -0.29
LIN54-210ENST00000510877 GOLGA6BA6NDN3 693 aa13.26□□□□□ -0.29
LIN54-210ENST00000510877 GOLGA8SH3BPF8 625 aa13.26□□□□□ -0.29
LIN54-210ENST00000510877 GOLGA6DP0CG33 693 aa13.26□□□□□ -0.29
LIN54-210ENST00000510877 HEATR6Q6AI08 1181 aaKnown RBP13.26□□□□□ -0.29
LIN54-210ENST00000510877 TOGARAM2Q6ZUX3 1019 aa13.26□□□□□ -0.29
LIN54-210ENST00000510877 SPATA6Q9NWH7 488 aaPredicted RBP13.26□□□□□ -0.29
LIN54-210ENST00000510877 TRMT1Q9NXH9 659 aaKnown RBP13.26□□□□□ -0.29
LIN54-210ENST00000510877 GOLGA6AQ9NYA3 693 aa13.26□□□□□ -0.29
LIN54-210ENST00000510877 FER1L6Q2WGJ9 1857 aa13.26□□□□□ -0.29
LIN54-210ENST00000510877 FAM47DPA6NHR8 397 aa13.26□□□□□ -0.29
LIN54-210ENST00000510877 ABCB4P21439 1286 aa13.26□□□□□ -0.29
LIN54-210ENST00000510877 ITKQ08881 620 aa13.26□□□□□ -0.29
LIN54-210ENST00000510877 GDF15Q99988 308 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms