RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 CBWD2Q8IUF1 395 aa9.48□□□□□ -0.89
PDLIM5-213ENST00000509357 ZC3H3Q8IXZ2 948 aaKnown RBP9.48□□□□□ -0.89
PDLIM5-213ENST00000509357 ADSSL1Q8N142 457 aa9.48□□□□□ -0.89
PDLIM5-213ENST00000509357 CMASQ8NFW8 434 aaPredicted RBP9.48□□□□□ -0.89
PDLIM5-213ENST00000509357 CXorf38Q8TB03 319 aa9.48□□□□□ -0.89
PDLIM5-213ENST00000509357 NOC3LQ8WTT2 800 aaKnown RBP9.48□□□□□ -0.89
PDLIM5-213ENST00000509357 HDAC7Q8WUI4 952 aa9.48□□□□□ -0.89
PDLIM5-213ENST00000509357 POMGNT1Q8WZA1 660 aa9.48□□□□□ -0.89
PDLIM5-213ENST00000509357 EEF2KMTQ96G04 330 aa9.48□□□□□ -0.89
PDLIM5-213ENST00000509357 CLSTN3Q9BQT9 956 aa9.48□□□□□ -0.89
PDLIM5-213ENST00000509357 KIAA1468Q9P260 1216 aa9.48□□□□□ -0.89
PDLIM5-213ENST00000509357 TUBGCP4Q9UGJ1 667 aa9.48□□□□□ -0.89
PDLIM5-213ENST00000509357 RAPGEFL1Q9UHV5 662 aa9.48□□□□□ -0.89
PDLIM5-213ENST00000509357 UBQLN1Q9UMX0 589 aaKnown RBP9.48□□□□□ -0.89
PDLIM5-213ENST00000509357 POLIQ9UNA4 740 aa9.48□□□□□ -0.89
PDLIM5-213ENST00000509357 PCDHB13Q9Y5F0 798 aa9.48□□□□□ -0.89
PDLIM5-213ENST00000509357 CDY1Q9Y6F8 540 aa9.48□□□□□ -0.89
PDLIM5-213ENST00000509357 UBE4BO95155 1302 aa9.48□□□□□ -0.89
PDLIM5-213ENST00000509357 TMEM221A6NGB7 291 aa9.47□□□□□ -0.89
PDLIM5-213ENST00000509357 LACTBL1A8MY62 500 aa9.47□□□□□ -0.89
PDLIM5-213ENST00000509357 H7C4K7 107 aa9.47□□□□□ -0.89
PDLIM5-213ENST00000509357 M0R296 226 aa9.47□□□□□ -0.89
PDLIM5-213ENST00000509357 XYLBO75191 536 aa9.47□□□□□ -0.89
PDLIM5-213ENST00000509357 C1RP00736 705 aa9.47□□□□□ -0.89
PDLIM5-213ENST00000509357 NFICP08651 508 aa9.47□□□□□ -0.89
PDLIM5-213ENST00000509357 MTMR3Q13615 1198 aa9.47□□□□□ -0.89
PDLIM5-213ENST00000509357 PTPN21Q16825 1174 aa9.47□□□□□ -0.89
PDLIM5-213ENST00000509357 DPCR1Q3MIW9 517 aa9.47□□□□□ -0.89
PDLIM5-213ENST00000509357 COBLL1Q53SF7 1204 aa9.47□□□□□ -0.89
PDLIM5-213ENST00000509357 CYP26C1Q6V0L0 522 aa9.47□□□□□ -0.89
PDLIM5-213ENST00000509357 DSTYKQ6XUX3 929 aa9.47□□□□□ -0.89
PDLIM5-213ENST00000509357 TRIM67Q6ZTA4 783 aa9.47□□□□□ -0.89
PDLIM5-213ENST00000509357 STXBP4Q6ZWJ1 553 aa9.47□□□□□ -0.89
PDLIM5-213ENST00000509357 GUF1Q8N442 669 aaKnown RBP9.47□□□□□ -0.89
PDLIM5-213ENST00000509357 APPL2Q8NEU8 664 aa9.47□□□□□ -0.89
PDLIM5-213ENST00000509357 BEST2Q8NFU1 509 aa9.47□□□□□ -0.89
PDLIM5-213ENST00000509357 SMARCE1Q969G3 411 aa9.47□□□□□ -0.89
PDLIM5-213ENST00000509357 PBXIP1Q96AQ6 731 aa9.47□□□□□ -0.89
PDLIM5-213ENST00000509357 MFSD14AQ96MC6 490 aa9.47□□□□□ -0.89
PDLIM5-213ENST00000509357 GSDMAQ96QA5 445 aa9.47□□□□□ -0.89
PDLIM5-213ENST00000509357 DUSP9Q99956 384 aaKnown RBP9.47□□□□□ -0.89
PDLIM5-213ENST00000509357 PRKD2Q9BZL6 878 aa9.47□□□□□ -0.89
PDLIM5-213ENST00000509357 C11orf16Q9NQ32 467 aa9.47□□□□□ -0.89
PDLIM5-213ENST00000509357 ZDHHC7Q9NXF8 308 aa9.47□□□□□ -0.89
PDLIM5-213ENST00000509357 HSPBP1Q9NZL4 362 aa9.47□□□□□ -0.89
PDLIM5-213ENST00000509357 AGO2Q9UKV8 859 aaKnown RBP9.47□□□□□ -0.89
PDLIM5-213ENST00000509357 USTQ9Y2C2 406 aa9.47□□□□□ -0.89
PDLIM5-213ENST00000509357 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.47□□□□□ -0.89
PDLIM5-213ENST00000509357 PRRG1O14668 218 aa9.46□□□□□ -0.9
PDLIM5-213ENST00000509357 SYN3O14994 580 aa9.46□□□□□ -0.9
PDLIM5-213ENST00000509357 CCL16O15467 120 aa9.46□□□□□ -0.9
PDLIM5-213ENST00000509357 ADAM12O43184 909 aa9.46□□□□□ -0.9
PDLIM5-213ENST00000509357 ZMYND10O75800 440 aa9.46□□□□□ -0.9
PDLIM5-213ENST00000509357 ASGR2P07307 311 aa9.46□□□□□ -0.9
PDLIM5-213ENST00000509357 C8AP07357 584 aa9.46□□□□□ -0.9
PDLIM5-213ENST00000509357 CYP3A5P20815 502 aa9.46□□□□□ -0.9
PDLIM5-213ENST00000509357 GARTP22102 1010 aa9.46□□□□□ -0.9
PDLIM5-213ENST00000509357 CYP2J2P51589 502 aa9.46□□□□□ -0.9
PDLIM5-213ENST00000509357 DLG4P78352 724 aa9.46□□□□□ -0.9
PDLIM5-213ENST00000509357 PSMD2Q13200 908 aa9.46□□□□□ -0.9
PDLIM5-213ENST00000509357 ALCAMQ13740 583 aa9.46□□□□□ -0.9
PDLIM5-213ENST00000509357 RAB33AQ14088 237 aa9.46□□□□□ -0.9
PDLIM5-213ENST00000509357 CTXN3Q4LDR2 81 aa9.46□□□□□ -0.9
PDLIM5-213ENST00000509357 VARS2Q5ST30 1063 aaKnown RBP9.46□□□□□ -0.9
PDLIM5-213ENST00000509357 LMBRD2Q68DH5 695 aaPredicted RBP9.46□□□□□ -0.9
PDLIM5-213ENST00000509357 ANKRD40Q6AI12 368 aa9.46□□□□□ -0.9
PDLIM5-213ENST00000509357 JADE1Q6IE81 842 aa9.46□□□□□ -0.9
PDLIM5-213ENST00000509357 CENPPQ6IPU0 288 aa9.46□□□□□ -0.9
PDLIM5-213ENST00000509357 TTI2Q6NXR4 508 aa9.46□□□□□ -0.9
PDLIM5-213ENST00000509357 LILRA6Q6PI73 481 aa9.46□□□□□ -0.9
PDLIM5-213ENST00000509357 GET4Q7L5D6 327 aaPredicted RBP9.46□□□□□ -0.9
PDLIM5-213ENST00000509357 USP37Q86T82 979 aa9.46□□□□□ -0.9
PDLIM5-213ENST00000509357 BRSK2Q8IWQ3 736 aa9.46□□□□□ -0.9
PDLIM5-213ENST00000509357 SUGP1Q8IWZ8 645 aaKnown RBP9.46□□□□□ -0.9
PDLIM5-213ENST00000509357 CD302Q8IX05 232 aa9.46□□□□□ -0.9
PDLIM5-213ENST00000509357 C12orf56Q8IXR9 622 aa9.46□□□□□ -0.9
PDLIM5-213ENST00000509357 ZDHHC14Q8IZN3 488 aa9.46□□□□□ -0.9
PDLIM5-213ENST00000509357 OR5B17Q8NGF7 314 aa9.46□□□□□ -0.9
PDLIM5-213ENST00000509357 SLC7A14Q8TBB6 771 aa9.46□□□□□ -0.9
PDLIM5-213ENST00000509357 FEZF2Q8TBJ5 459 aa9.46□□□□□ -0.9
PDLIM5-213ENST00000509357 ZNF516Q92618 1163 aa9.46□□□□□ -0.9
PDLIM5-213ENST00000509357 ELMO3Q96BJ8 720 aa9.46□□□□□ -0.9
PDLIM5-213ENST00000509357 BORCS6Q96GS4 357 aa9.46□□□□□ -0.9
PDLIM5-213ENST00000509357 TSPAN18Q96SJ8 248 aa9.46□□□□□ -0.9
PDLIM5-213ENST00000509357 FAM213AQ9BRX8 229 aa9.46□□□□□ -0.9
PDLIM5-213ENST00000509357 FUCA2Q9BTY2 467 aa9.46□□□□□ -0.9
PDLIM5-213ENST00000509357 NUP62CLQ9H1M0 184 aa9.46□□□□□ -0.9
PDLIM5-213ENST00000509357 WDR6Q9NNW5 1121 aaKnown RBP9.46□□□□□ -0.9
PDLIM5-213ENST00000509357 MTRRQ9UBK8 725 aa9.46□□□□□ -0.9
PDLIM5-213ENST00000509357 FBXW11Q9UKB1 542 aa9.46□□□□□ -0.9
PDLIM5-213ENST00000509357 SORCS3Q9UPU3 1222 aa9.46□□□□□ -0.9
PDLIM5-213ENST00000509357 TRAF3IP3Q9Y228 551 aa9.46□□□□□ -0.9
PDLIM5-213ENST00000509357 BACE2Q9Y5Z0 518 aa9.46□□□□□ -0.9
PDLIM5-213ENST00000509357 CLUHO75153 1309 aa9.46□□□□□ -0.9
PDLIM5-213ENST00000509357 LRRN2O75325 713 aa9.45□□□□□ -0.9
PDLIM5-213ENST00000509357 AKAP3O75969 853 aa9.45□□□□□ -0.9
PDLIM5-213ENST00000509357 NR3C1P04150 777 aa9.45□□□□□ -0.9
PDLIM5-213ENST00000509357 HNRNPA1P09651 372 aaKnown RBP eCLIP9.45□□□□□ -0.9
PDLIM5-213ENST00000509357 CPB1P15086 417 aa9.45□□□□□ -0.9
PDLIM5-213ENST00000509357 FSHRP23945 695 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms