RNA–Protein interactions for RNA: ENST00000509328.1

HOXC6-204, Transcript of homeobox C6, humanhuman

TSL 3

Gene HOXC6, Length 358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-204ENST00000509328 DLX2Q07687 328 aaPredicted RBP21.77■■□□□ 1.08
HOXC6-204ENST00000509328 SV2CQ496J9 727 aa21.77■■□□□ 1.08
HOXC6-204ENST00000509328 VARS2Q5ST30 1063 aaKnown RBP21.77■■□□□ 1.08
HOXC6-204ENST00000509328 LRRC52Q8N7C0 313 aa21.77■■□□□ 1.08
HOXC6-204ENST00000509328 CXorf38Q8TB03 319 aa21.77■■□□□ 1.08
HOXC6-204ENST00000509328 PLEKHO2Q8TD55 490 aa21.77■■□□□ 1.08
HOXC6-204ENST00000509328 TMC2Q8TDI7 906 aa21.77■■□□□ 1.08
HOXC6-204ENST00000509328 PARD3BQ8TEW8 1205 aa21.77■■□□□ 1.08
HOXC6-204ENST00000509328 FAM84AQ96KN4 292 aa21.77■■□□□ 1.08
HOXC6-204ENST00000509328 POP1Q99575 1024 aaKnown RBP21.77■■□□□ 1.08
HOXC6-204ENST00000509328 GZF1Q9H116 711 aaPredicted RBP21.77■■□□□ 1.08
HOXC6-204ENST00000509328 CLEC1BQ9P126 229 aa21.77■■□□□ 1.08
HOXC6-204ENST00000509328 MTRRQ9UBK8 725 aa21.77■■□□□ 1.08
HOXC6-204ENST00000509328 AGAP1Q9UPQ3 857 aa21.77■■□□□ 1.08
HOXC6-204ENST00000509328 R3HCC1Q9Y3T6 440 aaKnown RBP21.77■■□□□ 1.08
HOXC6-204ENST00000509328 BACE2Q9Y5Z0 518 aa21.77■■□□□ 1.08
HOXC6-204ENST00000509328 ARHGEF37A1IGU5 675 aa21.76■■□□□ 1.07
HOXC6-204ENST00000509328 H7C4K7 107 aa21.76■■□□□ 1.07
HOXC6-204ENST00000509328 CETN3O15182 167 aa21.76■■□□□ 1.07
HOXC6-204ENST00000509328 SPTLC1O15269 473 aa21.76■■□□□ 1.07
HOXC6-204ENST00000509328 AKAP3O75969 853 aa21.76■■□□□ 1.07
HOXC6-204ENST00000509328 C1RP00736 705 aa21.76■■□□□ 1.07
HOXC6-204ENST00000509328 KRT19P08727 400 aa21.76■■□□□ 1.07
HOXC6-204ENST00000509328 PSMC2P35998 433 aaKnown RBP21.76■■□□□ 1.07
HOXC6-204ENST00000509328 AP3M2P53677 418 aa21.76■■□□□ 1.07
HOXC6-204ENST00000509328 PMS1P54277 932 aaKnown RBP21.76■■□□□ 1.07
HOXC6-204ENST00000509328 CLDN10P78369 228 aa21.76■■□□□ 1.07
HOXC6-204ENST00000509328 MRPS5P82675 430 aaKnown RBP21.76■■□□□ 1.07
HOXC6-204ENST00000509328 FKBP3Q00688 224 aaKnown RBP21.76■■□□□ 1.07
HOXC6-204ENST00000509328 LEXMQ3ZCV2 418 aa21.76■■□□□ 1.07
HOXC6-204ENST00000509328 TRAPPC11Q7Z392 1133 aa21.76■■□□□ 1.07
HOXC6-204ENST00000509328 USP37Q86T82 979 aa21.76■■□□□ 1.07
HOXC6-204ENST00000509328 SENP8Q96LD8 212 aa21.76■■□□□ 1.07
HOXC6-204ENST00000509328 CLSTN3Q9BQT9 956 aa21.76■■□□□ 1.07
HOXC6-204ENST00000509328 MKNK1Q9BUB5 465 aa21.76■■□□□ 1.07
HOXC6-204ENST00000509328 SIX4Q9UIU6 781 aa21.76■■□□□ 1.07
HOXC6-204ENST00000509328 BARX2Q9UMQ3 279 aaPredicted RBP21.76■■□□□ 1.07
HOXC6-204ENST00000509328 TRIM49BA6NDI0 452 aa21.75■■□□□ 1.07
HOXC6-204ENST00000509328 LRRIQ3A6PVS8 624 aaPredicted RBP21.75■■□□□ 1.07
HOXC6-204ENST00000509328 KPNA7A9QM74 516 aa21.75■■□□□ 1.07
HOXC6-204ENST00000509328 H3BQ06 376 aaPredicted RBP21.75■■□□□ 1.07
HOXC6-204ENST00000509328 ODC1P11926 461 aa21.75■■□□□ 1.07
HOXC6-204ENST00000509328 EPCAMP16422 314 aa21.75■■□□□ 1.07
HOXC6-204ENST00000509328 TYMPP19971 482 aa21.75■■□□□ 1.07
HOXC6-204ENST00000509328 ENPEPQ07075 957 aa21.75■■□□□ 1.07
HOXC6-204ENST00000509328 MRPL58Q14197 206 aaKnown RBP21.75■■□□□ 1.07
HOXC6-204ENST00000509328 KLHL10Q6JEL2 608 aa21.75■■□□□ 1.07
HOXC6-204ENST00000509328 FOXR2Q6PJQ5 311 aa21.75■■□□□ 1.07
HOXC6-204ENST00000509328 INTS8Q75QN2 995 aaKnown RBP21.75■■□□□ 1.07
HOXC6-204ENST00000509328 GLYCTKQ8IVS8 523 aa21.75■■□□□ 1.07
HOXC6-204ENST00000509328 ZC3H3Q8IXZ2 948 aaKnown RBP21.75■■□□□ 1.07
HOXC6-204ENST00000509328 FAM186BQ8IYM0 893 aa21.75■■□□□ 1.07
HOXC6-204ENST00000509328 NELFBQ8WX92 580 aa21.75■■□□□ 1.07
HOXC6-204ENST00000509328 ZNF516Q92618 1163 aa21.75■■□□□ 1.07
HOXC6-204ENST00000509328 MSLNLQ96KJ4 702 aa21.75■■□□□ 1.07
HOXC6-204ENST00000509328 DZANK1Q9NVP4 752 aa21.75■■□□□ 1.07
HOXC6-204ENST00000509328 BICDL2A1A5D9 508 aa21.74■■□□□ 1.07
HOXC6-204ENST00000509328 GLUD1P00367 558 aa21.74■■□□□ 1.07
HOXC6-204ENST00000509328 KRT13P13646 458 aa21.74■■□□□ 1.07
HOXC6-204ENST00000509328 YWHAHQ04917 246 aaPredicted RBP21.74■■□□□ 1.07
HOXC6-204ENST00000509328 ANKRD54Q6NXT1 300 aa21.74■■□□□ 1.07
HOXC6-204ENST00000509328 PALB2Q86YC2 1186 aa21.74■■□□□ 1.07
HOXC6-204ENST00000509328 BORCS6Q96GS4 357 aa21.74■■□□□ 1.07
HOXC6-204ENST00000509328 DPP7Q9UHL4 492 aa21.74■■□□□ 1.07
HOXC6-204ENST00000509328 CD207Q9UJ71 328 aa21.74■■□□□ 1.07
HOXC6-204ENST00000509328 DSEQ9UL01 958 aa21.74■■□□□ 1.07
HOXC6-204ENST00000509328 CYB561D2O14569 222 aa21.73■■□□□ 1.07
HOXC6-204ENST00000509328 IKBKBO14920 756 aa21.73■■□□□ 1.07
HOXC6-204ENST00000509328 OAZ2O95190 189 aa21.73■■□□□ 1.07
HOXC6-204ENST00000509328 EPB41P11171 864 aaKnown RBP21.73■■□□□ 1.07
HOXC6-204ENST00000509328 HOXB8P17481 243 aaPredicted RBP21.73■■□□□ 1.07
HOXC6-204ENST00000509328 OR1D2P34982 312 aa21.73■■□□□ 1.07
HOXC6-204ENST00000509328 VAMP7P51809 220 aa21.73■■□□□ 1.07
HOXC6-204ENST00000509328 DLG4P78352 724 aa21.73■■□□□ 1.07
HOXC6-204ENST00000509328 BFSP1Q12934 665 aa21.73■■□□□ 1.07
HOXC6-204ENST00000509328 MYO1EQ12965 1108 aa21.73■■□□□ 1.07
HOXC6-204ENST00000509328 PAK1Q13153 545 aa21.73■■□□□ 1.07
HOXC6-204ENST00000509328 PUS10Q3MIT2 529 aaKnown RBP21.73■■□□□ 1.07
HOXC6-204ENST00000509328 SCARA3Q6AZY7 606 aa21.73■■□□□ 1.07
HOXC6-204ENST00000509328 ZNF280DQ6N043 979 aa21.73■■□□□ 1.07
HOXC6-204ENST00000509328 ELMSAN1Q6PJG2 1045 aa21.73■■□□□ 1.07
HOXC6-204ENST00000509328 EEF2KMTQ96G04 330 aa21.73■■□□□ 1.07
HOXC6-204ENST00000509328 ASB2Q96Q27 587 aa21.73■■□□□ 1.07
HOXC6-204ENST00000509328 OXCT2Q9BYC2 517 aaPredicted RBP21.73■■□□□ 1.07
HOXC6-204ENST00000509328 CTNND2Q9UQB3 1225 aa21.73■■□□□ 1.07
HOXC6-204ENST00000509328 TIMM13Q9Y5L4 95 aaPredicted RBP21.73■■□□□ 1.07
HOXC6-204ENST00000509328 CDY1Q9Y6F8 540 aa21.73■■□□□ 1.07
HOXC6-204ENST00000509328 SPTBN5Q9NRC6 3674 aaKnown RBP21.72■■□□□ 1.07
HOXC6-204ENST00000509328 SLC16A3O15427 465 aaKnown RBP21.72■■□□□ 1.07
HOXC6-204ENST00000509328 ADAM12O43184 909 aa21.72■■□□□ 1.07
HOXC6-204ENST00000509328 TGM5O43548 720 aa21.72■■□□□ 1.07
HOXC6-204ENST00000509328 TBC1D4O60343 1298 aa21.72■■□□□ 1.07
HOXC6-204ENST00000509328 CYP11A1P05108 521 aa21.72■■□□□ 1.07
HOXC6-204ENST00000509328 MCCD1P59942 119 aaPredicted RBP21.72■■□□□ 1.07
HOXC6-204ENST00000509328 RAB33AQ14088 237 aa21.72■■□□□ 1.07
HOXC6-204ENST00000509328 CTXN3Q4LDR2 81 aa21.72■■□□□ 1.07
HOXC6-204ENST00000509328 OVOS1Q6IE37 1185 aa21.72■■□□□ 1.07
HOXC6-204ENST00000509328 SLC8B1Q6J4K2 584 aa21.72■■□□□ 1.07
HOXC6-204ENST00000509328 TTI2Q6NXR4 508 aa21.72■■□□□ 1.07
HOXC6-204ENST00000509328 LILRA6Q6PI73 481 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms