RNA–Protein interactions for RNA: ENST00000509297.5

SMAD5-205, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 854 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-205ENST00000509297 MYH11P35749 1972 aa16.76■□□□□ 0.27
SMAD5-205ENST00000509297 EP300Q09472 2414 aaPredicted RBP16.76■□□□□ 0.27
SMAD5-205ENST00000509297 FAM170BA6NMN3 283 aa16.75■□□□□ 0.27
SMAD5-205ENST00000509297 LACTBL1A8MY62 500 aa16.75■□□□□ 0.27
SMAD5-205ENST00000509297 CPB1P15086 417 aa16.75■□□□□ 0.27
SMAD5-205ENST00000509297 PLCG1P19174 1290 aa16.75■□□□□ 0.27
SMAD5-205ENST00000509297 TYMPP19971 482 aa16.75■□□□□ 0.27
SMAD5-205ENST00000509297 TNFSF9P41273 254 aa16.75■□□□□ 0.27
SMAD5-205ENST00000509297 CCR2P41597 374 aa16.75■□□□□ 0.27
SMAD5-205ENST00000509297 RPS9P46781 194 aaKnown RBP16.75■□□□□ 0.27
SMAD5-205ENST00000509297 POU5F1Q01860 360 aaKnown RBP16.75■□□□□ 0.27
SMAD5-205ENST00000509297 GPR17Q13304 367 aa16.75■□□□□ 0.27
SMAD5-205ENST00000509297 PLD1Q13393 1074 aa16.75■□□□□ 0.27
SMAD5-205ENST00000509297 FAM78AQ5JUQ0 283 aa16.75■□□□□ 0.27
SMAD5-205ENST00000509297 SPATA1Q5VX52 437 aa16.75■□□□□ 0.27
SMAD5-205ENST00000509297 MAP4K3Q8IVH8 894 aa16.75■□□□□ 0.27
SMAD5-205ENST00000509297 MAML2Q8IZL2 1156 aaPredicted RBP16.75■□□□□ 0.27
SMAD5-205ENST00000509297 SMARCD2Q92925 531 aa16.75■□□□□ 0.27
SMAD5-205ENST00000509297 TCEAL4Q96EI5 215 aa16.75■□□□□ 0.27
SMAD5-205ENST00000509297 ASB16Q96NS5 453 aa16.75■□□□□ 0.27
SMAD5-205ENST00000509297 FIZ1Q96SL8 496 aa16.75■□□□□ 0.27
SMAD5-205ENST00000509297 PLA2G2FQ9BZM2 168 aa16.75■□□□□ 0.27
SMAD5-205ENST00000509297 CCSER1Q9C0I3 900 aa16.75■□□□□ 0.27
SMAD5-205ENST00000509297 GPR88Q9GZN0 384 aa16.75■□□□□ 0.27
SMAD5-205ENST00000509297 RPF1Q9H9Y2 349 aaKnown RBP16.75■□□□□ 0.27
SMAD5-205ENST00000509297 ZFP14Q9HCL3 533 aa16.75■□□□□ 0.27
SMAD5-205ENST00000509297 CEP72Q9P209 647 aa16.75■□□□□ 0.27
SMAD5-205ENST00000509297 CPSF3Q9UKF6 684 aaKnown RBP16.75■□□□□ 0.27
SMAD5-205ENST00000509297 MRPS17Q9Y2R5 130 aaKnown RBP16.75■□□□□ 0.27
SMAD5-205ENST00000509297 DERAQ9Y315 318 aa16.75■□□□□ 0.27
SMAD5-205ENST00000509297 K7ENM7 598 aa16.74■□□□□ 0.27
SMAD5-205ENST00000509297 NCAM2O15394 837 aa16.74■□□□□ 0.27
SMAD5-205ENST00000509297 LRRN2O75325 713 aa16.74■□□□□ 0.27
SMAD5-205ENST00000509297 MOSPD3O75425 235 aa16.74■□□□□ 0.27
SMAD5-205ENST00000509297 SPAG1Q07617 926 aa16.74■□□□□ 0.27
SMAD5-205ENST00000509297 TWF1Q12792 350 aa16.74■□□□□ 0.27
SMAD5-205ENST00000509297 MYBPC2Q14324 1141 aa16.74■□□□□ 0.27
SMAD5-205ENST00000509297 UBXN2BQ14CS0 331 aa16.74■□□□□ 0.27
SMAD5-205ENST00000509297 ZBTB41Q5SVQ8 909 aa16.74■□□□□ 0.27
SMAD5-205ENST00000509297 ZNF852Q6ZMS4 543 aa16.74■□□□□ 0.27
SMAD5-205ENST00000509297 RNF19BQ6ZMZ0 732 aa16.74■□□□□ 0.27
SMAD5-205ENST00000509297 USP37Q86T82 979 aa16.74■□□□□ 0.27
SMAD5-205ENST00000509297 LARP4BQ92615 738 aaKnown RBP16.74■□□□□ 0.27
SMAD5-205ENST00000509297 MSTO1Q9BUK6 570 aa16.74■□□□□ 0.27
SMAD5-205ENST00000509297 ASAH2Q9NR71 780 aa16.74■□□□□ 0.27
SMAD5-205ENST00000509297 HSFX1Q9UBD0 423 aa16.74■□□□□ 0.27
SMAD5-205ENST00000509297 MTF2Q9Y483 593 aaPredicted RBP16.74■□□□□ 0.27
SMAD5-205ENST00000509297 R4GN57 208 aa16.74■□□□□ 0.27
SMAD5-205ENST00000509297 DMXL1Q9Y485 3027 aa16.74■□□□□ 0.27
SMAD5-205ENST00000509297 DCHS1Q96JQ0 3298 aa16.73■□□□□ 0.27
SMAD5-205ENST00000509297 TBCAO75347 108 aaKnown RBP16.73■□□□□ 0.27
SMAD5-205ENST00000509297 VNN2O95498 520 aa16.73■□□□□ 0.27
SMAD5-205ENST00000509297 KRT18P05783 430 aaKnown RBP16.73■□□□□ 0.27
SMAD5-205ENST00000509297 DDIT3P35638 169 aa16.73■□□□□ 0.27
SMAD5-205ENST00000509297 LILRA4P59901 499 aa16.73■□□□□ 0.27
SMAD5-205ENST00000509297 CUL4AQ13619 759 aa16.73■□□□□ 0.27
SMAD5-205ENST00000509297 MCM6Q14566 821 aa16.73■□□□□ 0.27
SMAD5-205ENST00000509297 KARSQ15046 597 aaKnown RBP16.73■□□□□ 0.27
SMAD5-205ENST00000509297 SF3A1Q15459 793 aaKnown RBP16.73■□□□□ 0.27
SMAD5-205ENST00000509297 SLC39A4Q6P5W5 647 aa16.73■□□□□ 0.27
SMAD5-205ENST00000509297 TPRG1Q6ZUI0 275 aa16.73■□□□□ 0.27
SMAD5-205ENST00000509297 DEPDC1BQ8WUY9 529 aa16.73■□□□□ 0.27
SMAD5-205ENST00000509297 IRF7Q92985 503 aa16.73■□□□□ 0.27
SMAD5-205ENST00000509297 E2F7Q96AV8 911 aa16.73■□□□□ 0.27
SMAD5-205ENST00000509297 TRMT61BQ9BVS5 477 aaKnown RBP16.73■□□□□ 0.27
SMAD5-205ENST00000509297 ASB7Q9H672 318 aa16.73■□□□□ 0.27
SMAD5-205ENST00000509297 C2CD2Q9Y426 696 aa16.73■□□□□ 0.27
SMAD5-205ENST00000509297 YIPF1Q9Y548 306 aa16.73■□□□□ 0.27
SMAD5-205ENST00000509297 STYXL1Q9Y6J8 313 aa16.73■□□□□ 0.27
SMAD5-205ENST00000509297 MIA3Q5JRA6 1907 aa16.72■□□□□ 0.27
SMAD5-205ENST00000509297 CACNA1AO00555 2505 aa16.72■□□□□ 0.27
SMAD5-205ENST00000509297 CACNA1IQ9P0X4 2223 aa16.72■□□□□ 0.27
SMAD5-205ENST00000509297 OTOGLQ3ZCN5 2332 aa16.72■□□□□ 0.27
SMAD5-205ENST00000509297 SHISA7A6NL88 538 aa16.72■□□□□ 0.27
SMAD5-205ENST00000509297 PIRO00625 290 aa16.72■□□□□ 0.27
SMAD5-205ENST00000509297 MAN2B1O00754 1011 aa16.72■□□□□ 0.27
SMAD5-205ENST00000509297 LAMTOR5O43504 91 aa16.72■□□□□ 0.27
SMAD5-205ENST00000509297 ODC1P11926 461 aa16.72■□□□□ 0.27
SMAD5-205ENST00000509297 PSMC3P17980 439 aa16.72■□□□□ 0.27
SMAD5-205ENST00000509297 PDCP20941 246 aa16.72■□□□□ 0.27
SMAD5-205ENST00000509297 MLLT6P55198 1093 aaPredicted RBP16.72■□□□□ 0.27
SMAD5-205ENST00000509297 GRIN1Q05586 938 aa16.72■□□□□ 0.27
SMAD5-205ENST00000509297 DHX8Q14562 1220 aaKnown RBP16.72■□□□□ 0.27
SMAD5-205ENST00000509297 OVOS1Q6IE37 1185 aa16.72■□□□□ 0.27
SMAD5-205ENST00000509297 SLFN12LQ6IEE8 588 aa16.72■□□□□ 0.27
SMAD5-205ENST00000509297 CENPPQ6IPU0 288 aa16.72■□□□□ 0.27
SMAD5-205ENST00000509297 DSTYKQ6XUX3 929 aa16.72■□□□□ 0.27
SMAD5-205ENST00000509297 MAMSTRQ6ZN01 415 aa16.72■□□□□ 0.27
SMAD5-205ENST00000509297 HS6ST3Q8IZP7 471 aa16.72■□□□□ 0.27
SMAD5-205ENST00000509297 ZNF687Q8N1G0 1237 aa16.72■□□□□ 0.27
SMAD5-205ENST00000509297 RASSF8Q8NHQ8 419 aa16.72■□□□□ 0.27
SMAD5-205ENST00000509297 KCNG4Q8TDN1 519 aa16.72■□□□□ 0.27
SMAD5-205ENST00000509297 NELL1Q92832 810 aa16.72■□□□□ 0.27
SMAD5-205ENST00000509297 HVCN1Q96D96 273 aa16.72■□□□□ 0.27
SMAD5-205ENST00000509297 ZSWIM3Q96MP5 696 aa16.72■□□□□ 0.27
SMAD5-205ENST00000509297 IER2Q9BTL4 223 aa16.72■□□□□ 0.27
SMAD5-205ENST00000509297 LRRC3Q9BY71 257 aa16.72■□□□□ 0.27
SMAD5-205ENST00000509297 BRD9Q9H8M2 597 aa16.72■□□□□ 0.27
SMAD5-205ENST00000509297 SPATA6Q9NWH7 488 aaPredicted RBP16.72■□□□□ 0.27
SMAD5-205ENST00000509297 ASB3Q9Y575 518 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms