RNA–Protein interactions for RNA: ENST00000508679.5

CALCOCO2-211, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2 BASIC

Gene CALCOCO2, Length 1,396 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-211ENST00000508679 ASS1P00966 412 aaKnown RBP16.12■□□□□ 0.17
CALCOCO2-211ENST00000508679 HLA-DRAP01903 254 aa16.12■□□□□ 0.17
CALCOCO2-211ENST00000508679 ATP1A3P13637 1013 aa16.12■□□□□ 0.17
CALCOCO2-211ENST00000508679 EEF1GP26641 437 aaKnown RBP16.12■□□□□ 0.17
CALCOCO2-211ENST00000508679 KCNJ12Q14500 433 aa16.12■□□□□ 0.17
CALCOCO2-211ENST00000508679 RTP2Q5QGT7 225 aa16.12■□□□□ 0.17
CALCOCO2-211ENST00000508679 KRT39Q6A163 491 aa16.12■□□□□ 0.17
CALCOCO2-211ENST00000508679 GPR65Q8IYL9 337 aa16.12■□□□□ 0.17
CALCOCO2-211ENST00000508679 ELMO3Q96BJ8 720 aa16.12■□□□□ 0.17
CALCOCO2-211ENST00000508679 TMEM169Q96HH4 297 aa16.12■□□□□ 0.17
CALCOCO2-211ENST00000508679 NAT10Q9H0A0 1025 aaKnown RBP16.12■□□□□ 0.17
CALCOCO2-211ENST00000508679 LMAN2LQ9H0V9 348 aa16.12■□□□□ 0.17
CALCOCO2-211ENST00000508679 PRDM12Q9H4Q4 367 aa16.12■□□□□ 0.17
CALCOCO2-211ENST00000508679 APOBEC3GQ9HC16 384 aaKnown RBP16.12■□□□□ 0.17
CALCOCO2-211ENST00000508679 LIMA1Q9UHB6 759 aaKnown RBP16.12■□□□□ 0.17
CALCOCO2-211ENST00000508679 TADA2AO75478 443 aa16.11■□□□□ 0.17
CALCOCO2-211ENST00000508679 CYP11A1P05108 521 aa16.11■□□□□ 0.17
CALCOCO2-211ENST00000508679 CTSAP10619 480 aa16.11■□□□□ 0.17
CALCOCO2-211ENST00000508679 PAX3P23760 479 aa16.11■□□□□ 0.17
CALCOCO2-211ENST00000508679 TAF6P49848 677 aa16.11■□□□□ 0.17
CALCOCO2-211ENST00000508679 DSG1Q02413 1049 aa16.11■□□□□ 0.17
CALCOCO2-211ENST00000508679 NCOA4Q13772 614 aa16.11■□□□□ 0.17
CALCOCO2-211ENST00000508679 KRT31Q15323 416 aa16.11■□□□□ 0.17
CALCOCO2-211ENST00000508679 DCAF17Q5H9S7 520 aaPredicted RBP16.11■□□□□ 0.17
CALCOCO2-211ENST00000508679 ZNF697Q5TEC3 545 aa16.11■□□□□ 0.17
CALCOCO2-211ENST00000508679 USP37Q86T82 979 aa16.11■□□□□ 0.17
CALCOCO2-211ENST00000508679 LUZP1Q86V48 1076 aa16.11■□□□□ 0.17
CALCOCO2-211ENST00000508679 GAS2L3Q86XJ1 694 aa16.11■□□□□ 0.17
CALCOCO2-211ENST00000508679 FAM200AQ8TCP9 573 aa16.11■□□□□ 0.17
CALCOCO2-211ENST00000508679 B3GALT6Q96L58 329 aa16.11■□□□□ 0.17
CALCOCO2-211ENST00000508679 SENP8Q96LD8 212 aa16.11■□□□□ 0.17
CALCOCO2-211ENST00000508679 MTMR10Q9NXD2 777 aa16.11■□□□□ 0.17
CALCOCO2-211ENST00000508679 NME7Q9Y5B8 376 aa16.11■□□□□ 0.17
CALCOCO2-211ENST00000508679 PCDHGC5Q9Y5F6 944 aa16.11■□□□□ 0.17
CALCOCO2-211ENST00000508679 PTPRDP23468 1912 aa16.1■□□□□ 0.17
CALCOCO2-211ENST00000508679 KPNA7A9QM74 516 aa16.1■□□□□ 0.17
CALCOCO2-211ENST00000508679 P4HA2O15460 535 aa16.1■□□□□ 0.17
CALCOCO2-211ENST00000508679 TKTP29401 623 aaKnown RBP16.1■□□□□ 0.17
CALCOCO2-211ENST00000508679 ATICP31939 592 aa16.1■□□□□ 0.17
CALCOCO2-211ENST00000508679 PNPLA4P41247 253 aa16.1■□□□□ 0.17
CALCOCO2-211ENST00000508679 MXI1P50539 228 aa16.1■□□□□ 0.17
CALCOCO2-211ENST00000508679 PTPN14Q15678 1187 aa16.1■□□□□ 0.17
CALCOCO2-211ENST00000508679 MAN2A1Q16706 1144 aa16.1■□□□□ 0.17
CALCOCO2-211ENST00000508679 RSPO2Q6UXX9 243 aaPredicted RBP16.1■□□□□ 0.17
CALCOCO2-211ENST00000508679 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.1■□□□□ 0.17
CALCOCO2-211ENST00000508679 FAM114A1Q8IWE2 563 aa16.1■□□□□ 0.17
CALCOCO2-211ENST00000508679 VPS52Q8N1B4 723 aa16.1■□□□□ 0.17
CALCOCO2-211ENST00000508679 LNX1Q8TBB1 728 aaPredicted RBP16.1■□□□□ 0.17
CALCOCO2-211ENST00000508679 HPDLQ96IR7 371 aa16.1■□□□□ 0.17
CALCOCO2-211ENST00000508679 RTP3Q9BQQ7 232 aa16.1■□□□□ 0.17
CALCOCO2-211ENST00000508679 TUBGCP2Q9BSJ2 902 aa16.1■□□□□ 0.17
CALCOCO2-211ENST00000508679 RXFP1Q9HBX9 757 aa16.1■□□□□ 0.17
CALCOCO2-211ENST00000508679 LMCD1Q9NZU5 365 aa16.1■□□□□ 0.17
CALCOCO2-211ENST00000508679 PCDHB8Q9UN66 801 aa16.1■□□□□ 0.17
CALCOCO2-211ENST00000508679 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.1■□□□□ 0.17
CALCOCO2-211ENST00000508679 SF3B1O75533 1304 aaKnown RBP eCLIP16.1■□□□□ 0.173e-6■■■□□ 16.8
CALCOCO2-211ENST00000508679 SYN3O14994 580 aa16.09■□□□□ 0.17
CALCOCO2-211ENST00000508679 STX10O60499 249 aa16.09■□□□□ 0.17
CALCOCO2-211ENST00000508679 OAZ2O95190 189 aa16.09■□□□□ 0.17
CALCOCO2-211ENST00000508679 AFPP02771 609 aaKnown RBP16.09■□□□□ 0.17
CALCOCO2-211ENST00000508679 KRT17Q04695 432 aa16.09■□□□□ 0.17
CALCOCO2-211ENST00000508679 KCNMA1Q12791 1236 aa16.09■□□□□ 0.17
CALCOCO2-211ENST00000508679 ELAVL2Q12926 359 aaKnown RBP16.09■□□□□ 0.17
CALCOCO2-211ENST00000508679 TPD52L1Q16890 204 aaPredicted RBP16.09■□□□□ 0.17
CALCOCO2-211ENST00000508679 SOWAHAQ2M3V2 549 aa16.09■□□□□ 0.17
CALCOCO2-211ENST00000508679 SV2CQ496J9 727 aa16.09■□□□□ 0.17
CALCOCO2-211ENST00000508679 FAM171A1Q5VUB5 890 aa16.09■□□□□ 0.17
CALCOCO2-211ENST00000508679 TCERG1LQ5VWI1 586 aa16.09■□□□□ 0.17
CALCOCO2-211ENST00000508679 SPOPLQ6IQ16 392 aa16.09■□□□□ 0.17
CALCOCO2-211ENST00000508679 FBXL13Q8NEE6 735 aa16.09■□□□□ 0.17
CALCOCO2-211ENST00000508679 KBTBD7Q8WVZ9 684 aa16.09■□□□□ 0.17
CALCOCO2-211ENST00000508679 PIK3R5Q8WYR1 880 aa16.09■□□□□ 0.17
CALCOCO2-211ENST00000508679 MRPL38Q96DV4 380 aaKnown RBP16.09■□□□□ 0.17
CALCOCO2-211ENST00000508679 ZNF560Q96MR9 790 aa16.09■□□□□ 0.17
CALCOCO2-211ENST00000508679 PI4K2AQ9BTU6 479 aa16.09■□□□□ 0.17
CALCOCO2-211ENST00000508679 TSPY26PQ9H489 355 aa16.09■□□□□ 0.17
CALCOCO2-211ENST00000508679 TLR9Q9NR96 1032 aa16.09■□□□□ 0.17
CALCOCO2-211ENST00000508679 RAB20Q9NX57 234 aa16.09■□□□□ 0.17
CALCOCO2-211ENST00000508679 L1RE1Q9UN81 338 aa16.09■□□□□ 0.17
CALCOCO2-211ENST00000508679 NUB1Q9Y5A7 615 aa16.09■□□□□ 0.17
CALCOCO2-211ENST00000508679 MTCH2Q9Y6C9 303 aa16.09■□□□□ 0.17
CALCOCO2-211ENST00000508679 C2orf71A6NGG8 1288 aa16.08■□□□□ 0.16
CALCOCO2-211ENST00000508679 SMTNL1A8MU46 457 aa16.08■□□□□ 0.16
CALCOCO2-211ENST00000508679 HIDE1A8MVS5 230 aa16.08■□□□□ 0.16
CALCOCO2-211ENST00000508679 GABRDO14764 452 aa16.08■□□□□ 0.16
CALCOCO2-211ENST00000508679 KRT19P08727 400 aa16.08■□□□□ 0.16
CALCOCO2-211ENST00000508679 TYMPP19971 482 aa16.08■□□□□ 0.16
CALCOCO2-211ENST00000508679 BIRC3Q13489 604 aa16.08■□□□□ 0.16
CALCOCO2-211ENST00000508679 KCNC3Q14003 757 aa16.08■□□□□ 0.16
CALCOCO2-211ENST00000508679 SGSM1Q2NKQ1 1148 aa16.08■□□□□ 0.16
CALCOCO2-211ENST00000508679 USP41Q3LFD5 358 aa16.08■□□□□ 0.16
CALCOCO2-211ENST00000508679 VWA3BQ502W6 1294 aa16.08■□□□□ 0.16
CALCOCO2-211ENST00000508679 MRPL43Q8N983 215 aaKnown RBP16.08■□□□□ 0.16
CALCOCO2-211ENST00000508679 AUTS2Q8WXX7 1259 aa16.08■□□□□ 0.16
CALCOCO2-211ENST00000508679 TAF4BQ92750 862 aa16.08■□□□□ 0.16
CALCOCO2-211ENST00000508679 FAM161BQ96MY7 647 aa16.08■□□□□ 0.16
CALCOCO2-211ENST00000508679 CDX2Q99626 313 aaPredicted RBP16.08■□□□□ 0.16
CALCOCO2-211ENST00000508679 TTPALQ9BTX7 342 aa16.08■□□□□ 0.16
CALCOCO2-211ENST00000508679 SDCBP2Q9H190 292 aa16.08■□□□□ 0.16
CALCOCO2-211ENST00000508679 NDST4Q9H3R1 872 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms