RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 ATP2C1P98194 919 aaPredicted RBP6.14□□□□□ -1.43
HMGB1P44-201ENST00000508597 EGR3Q06889 387 aa6.14□□□□□ -1.43
HMGB1P44-201ENST00000508597 ARHGAP1Q07960 439 aa6.14□□□□□ -1.43
HMGB1P44-201ENST00000508597 PPP2R5CQ13362 524 aa6.14□□□□□ -1.43
HMGB1P44-201ENST00000508597 NCAPHQ15003 741 aa6.14□□□□□ -1.43
HMGB1P44-201ENST00000508597 ZNF174Q15697 407 aa6.14□□□□□ -1.43
HMGB1P44-201ENST00000508597 DGKDQ16760 1214 aa6.14□□□□□ -1.43
HMGB1P44-201ENST00000508597 LY6KQ17RY6 165 aa6.14□□□□□ -1.43
HMGB1P44-201ENST00000508597 LCE3BQ5TA77 95 aa6.14□□□□□ -1.43
HMGB1P44-201ENST00000508597 LRCH2Q5VUJ6 765 aa6.14□□□□□ -1.43
HMGB1P44-201ENST00000508597 ANO1Q5XXA6 986 aa6.14□□□□□ -1.43
HMGB1P44-201ENST00000508597 FERMT3Q86UX7 667 aa6.14□□□□□ -1.43
HMGB1P44-201ENST00000508597 KLHDC9Q8NEP7 349 aa6.14□□□□□ -1.43
HMGB1P44-201ENST00000508597 OR6J1Q8NGC5 347 aa6.14□□□□□ -1.43
HMGB1P44-201ENST00000508597 CYP2W1Q8TAV3 490 aa6.14□□□□□ -1.43
HMGB1P44-201ENST00000508597 NEK9Q8TD19 979 aa6.14□□□□□ -1.43
HMGB1P44-201ENST00000508597 MICAL1Q8TDZ2 1067 aa6.14□□□□□ -1.43
HMGB1P44-201ENST00000508597 SEPT1Q8WYJ6 367 aa6.14□□□□□ -1.43
HMGB1P44-201ENST00000508597 FERMT2Q96AC1 680 aa6.14□□□□□ -1.43
HMGB1P44-201ENST00000508597 TCTN2Q96GX1 697 aa6.14□□□□□ -1.43
HMGB1P44-201ENST00000508597 MRFAP1L1Q96HT8 127 aa6.14□□□□□ -1.43
HMGB1P44-201ENST00000508597 DHRS1Q96LJ7 313 aa6.14□□□□□ -1.43
HMGB1P44-201ENST00000508597 AK8Q96MA6 479 aa6.14□□□□□ -1.43
HMGB1P44-201ENST00000508597 SCAND2PQ9GZW5 306 aaPredicted RBP6.14□□□□□ -1.43
HMGB1P44-201ENST00000508597 MKRN2Q9H000 416 aaKnown RBP6.14□□□□□ -1.43
HMGB1P44-201ENST00000508597 TRIT1Q9H3H1 467 aaKnown RBP6.14□□□□□ -1.43
HMGB1P44-201ENST00000508597 SP110Q9HB58 689 aa6.14□□□□□ -1.43
HMGB1P44-201ENST00000508597 XPNPEP3Q9NQH7 507 aa6.14□□□□□ -1.43
HMGB1P44-201ENST00000508597 PDGFCQ9NRA1 345 aa6.14□□□□□ -1.43
HMGB1P44-201ENST00000508597 OGDHLQ9ULD0 1010 aa6.14□□□□□ -1.43
HMGB1P44-201ENST00000508597 PCDHA12Q9UN75 941 aa6.14□□□□□ -1.43
HMGB1P44-201ENST00000508597 PCDHB6Q9Y5E3 794 aa6.14□□□□□ -1.43
HMGB1P44-201ENST00000508597 WDR81Q562E7 1941 aa6.14□□□□□ -1.43
HMGB1P44-201ENST00000508597 CENPFP49454 3210 aa6.14□□□□□ -1.43
HMGB1P44-201ENST00000508597 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.13□□□□□ -1.43
HMGB1P44-201ENST00000508597 KBTBD13C9JR72 458 aa6.13□□□□□ -1.43
HMGB1P44-201ENST00000508597 DNM1LO00429 736 aa6.13□□□□□ -1.43
HMGB1P44-201ENST00000508597 SLC37A4O43826 429 aa6.13□□□□□ -1.43
HMGB1P44-201ENST00000508597 ATP9AO75110 1047 aa6.13□□□□□ -1.43
HMGB1P44-201ENST00000508597 GJB6O95452 261 aa6.13□□□□□ -1.43
HMGB1P44-201ENST00000508597 EFEMP2O95967 443 aa6.13□□□□□ -1.43
HMGB1P44-201ENST00000508597 C6orf222P0C671 652 aaPredicted RBP6.13□□□□□ -1.43
HMGB1P44-201ENST00000508597 TRHRP34981 398 aaPredicted RBP6.13□□□□□ -1.43
HMGB1P44-201ENST00000508597 LONP1P36776 959 aaKnown RBP6.13□□□□□ -1.43
HMGB1P44-201ENST00000508597 CHMP4BP1P59074 171 aa6.13□□□□□ -1.43
HMGB1P44-201ENST00000508597 RNF4P78317 190 aa6.13□□□□□ -1.43
HMGB1P44-201ENST00000508597 SP2Q02086 613 aa6.13□□□□□ -1.43
HMGB1P44-201ENST00000508597 TEKQ02763 1124 aa6.13□□□□□ -1.43
HMGB1P44-201ENST00000508597 ITGB3BPQ13352 177 aaPredicted RBP6.13□□□□□ -1.43
HMGB1P44-201ENST00000508597 PKP1Q13835 747 aa6.13□□□□□ -1.43
HMGB1P44-201ENST00000508597 SLC39A14Q15043 492 aa6.13□□□□□ -1.43
HMGB1P44-201ENST00000508597 PTPAQ15257 358 aa6.13□□□□□ -1.43
HMGB1P44-201ENST00000508597 EPHA7Q15375 998 aa6.13□□□□□ -1.43
HMGB1P44-201ENST00000508597 FSCN1Q16658 493 aaKnown RBP6.13□□□□□ -1.43
HMGB1P44-201ENST00000508597 BBS9Q3SYG4 887 aa6.13□□□□□ -1.43
HMGB1P44-201ENST00000508597 HAUS3Q68CZ6 603 aa6.13□□□□□ -1.43
HMGB1P44-201ENST00000508597 MIS18BP1Q6P0N0 1132 aa6.13□□□□□ -1.43
HMGB1P44-201ENST00000508597 VHLLQ6RSH7 139 aa6.13□□□□□ -1.43
HMGB1P44-201ENST00000508597 B3GNT9Q6UX72 402 aa6.13□□□□□ -1.43
HMGB1P44-201ENST00000508597 C6orf15Q6UXA7 325 aaPredicted RBP6.13□□□□□ -1.43
HMGB1P44-201ENST00000508597 TMPRSS7Q7RTY8 843 aa6.13□□□□□ -1.43
HMGB1P44-201ENST00000508597 PLPPR4Q7Z2D5 763 aa6.13□□□□□ -1.43
HMGB1P44-201ENST00000508597 FAM178BQ8IXR5 827 aa6.13□□□□□ -1.43
HMGB1P44-201ENST00000508597 C4orf32Q8N8J7 132 aa6.13□□□□□ -1.43
HMGB1P44-201ENST00000508597 LINC00301Q8NCQ3 95 aa6.13□□□□□ -1.43
HMGB1P44-201ENST00000508597 ERMNQ8TAM6 284 aa6.13□□□□□ -1.43
HMGB1P44-201ENST00000508597 KCNG4Q8TDN1 519 aa6.13□□□□□ -1.43
HMGB1P44-201ENST00000508597 AFAP1L1Q8TED9 768 aa6.13□□□□□ -1.43
HMGB1P44-201ENST00000508597 U2AF1L4Q8WU68 220 aaKnown RBP6.13□□□□□ -1.43
HMGB1P44-201ENST00000508597 KLHL6Q8WZ60 621 aa6.13□□□□□ -1.43
HMGB1P44-201ENST00000508597 HAS1Q92839 578 aa6.13□□□□□ -1.43
HMGB1P44-201ENST00000508597 ZNF669Q96BR6 464 aaPredicted RBP6.13□□□□□ -1.43
HMGB1P44-201ENST00000508597 SPATA33Q96N06 139 aa6.13□□□□□ -1.43
HMGB1P44-201ENST00000508597 SRPK1Q96SB4 655 aaKnown RBP6.13□□□□□ -1.43
HMGB1P44-201ENST00000508597 GPR20Q99678 358 aa6.13□□□□□ -1.43
HMGB1P44-201ENST00000508597 KATNAL1Q9BW62 490 aa6.13□□□□□ -1.43
HMGB1P44-201ENST00000508597 SMARCAD1Q9H4L7 1026 aa6.13□□□□□ -1.43
HMGB1P44-201ENST00000508597 AZI2Q9H6S1 392 aa6.13□□□□□ -1.43
HMGB1P44-201ENST00000508597 TTC12Q9H892 705 aaPredicted RBP6.13□□□□□ -1.43
HMGB1P44-201ENST00000508597 ZNF281Q9Y2X9 895 aa6.13□□□□□ -1.43
HMGB1P44-201ENST00000508597 ZDHHC9Q9Y397 364 aa6.13□□□□□ -1.43
HMGB1P44-201ENST00000508597 ZNF451Q9Y4E5 1061 aa6.13□□□□□ -1.43
HMGB1P44-201ENST00000508597 PCDHA10Q9Y5I2 948 aa6.13□□□□□ -1.43
HMGB1P44-201ENST00000508597 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.13□□□□□ -1.43
HMGB1P44-201ENST00000508597 ELP1O95163 1332 aa6.13□□□□□ -1.43
HMGB1P44-201ENST00000508597 SYNRGQ9UMZ2 1314 aa6.13□□□□□ -1.43
HMGB1P44-201ENST00000508597 FRMPD3Q5JV73 1810 aa6.13□□□□□ -1.43
HMGB1P44-201ENST00000508597 DOCK5Q9H7D0 1870 aa6.13□□□□□ -1.43
HMGB1P44-201ENST00000508597 LOXHD1Q8IVV2 1947 aa6.13□□□□□ -1.43
HMGB1P44-201ENST00000508597 SCN10AQ9Y5Y9 1956 aa6.13□□□□□ -1.43
HMGB1P44-201ENST00000508597 IGKV6D-21A0A0A0MT36 114 aa6.12□□□□□ -1.43
HMGB1P44-201ENST00000508597 B2RBV5 119 aa6.12□□□□□ -1.43
HMGB1P44-201ENST00000508597 SPTLC2O15270 562 aa6.12□□□□□ -1.43
HMGB1P44-201ENST00000508597 PDPK1O15530 556 aa6.12□□□□□ -1.43
HMGB1P44-201ENST00000508597 CBFA2T2O43439 604 aa6.12□□□□□ -1.43
HMGB1P44-201ENST00000508597 SIGLEC6O43699 453 aa6.12□□□□□ -1.43
HMGB1P44-201ENST00000508597 TFRCP02786 760 aaKnown RBP6.12□□□□□ -1.43
HMGB1P44-201ENST00000508597 RPLP2P05387 115 aaKnown RBP6.12□□□□□ -1.43
HMGB1P44-201ENST00000508597 MMP3P08254 477 aa6.12□□□□□ -1.43
HMGB1P44-201ENST00000508597 SUPT20HL2P0C7V6 817 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms