RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 PRR18Q8N4B5 295 aa6.92□□□□□ -1.3
TOPBP1-206ENST00000508524 CPA6Q8N4T0 437 aa6.92□□□□□ -1.3
TOPBP1-206ENST00000508524 SSH3Q8TE77 659 aa6.92□□□□□ -1.3
TOPBP1-206ENST00000508524 RIOX1Q9H6W3 641 aa6.92□□□□□ -1.3
TOPBP1-206ENST00000508524 KCTD5Q9NXV2 234 aa6.92□□□□□ -1.3
TOPBP1-206ENST00000508524 POLR2AP24928 1970 aaKnown RBP6.91□□□□□ -1.3
TOPBP1-206ENST00000508524 TRGV11A0A075B6L2 103 aa6.91□□□□□ -1.3
TOPBP1-206ENST00000508524 PRAMEF33A0A0G2JMD5 474 aa6.91□□□□□ -1.3
TOPBP1-206ENST00000508524 E9PLN8 166 aa6.91□□□□□ -1.3
TOPBP1-206ENST00000508524 PRAMEF10O60809 474 aa6.91□□□□□ -1.3
TOPBP1-206ENST00000508524 PDCP20941 246 aa6.91□□□□□ -1.3
TOPBP1-206ENST00000508524 IBSPP21815 317 aaPredicted RBP6.91□□□□□ -1.3
TOPBP1-206ENST00000508524 CXCR5P32302 372 aa6.91□□□□□ -1.3
TOPBP1-206ENST00000508524 EXOSC10Q01780 885 aaKnown RBP6.91□□□□□ -1.3
TOPBP1-206ENST00000508524 CCDC93Q567U6 631 aa6.91□□□□□ -1.3
TOPBP1-206ENST00000508524 ZBTB46Q86UZ6 589 aa6.91□□□□□ -1.3
TOPBP1-206ENST00000508524 CFAP52Q8N1V2 620 aa6.91□□□□□ -1.3
TOPBP1-206ENST00000508524 PDPRQ8NCN5 879 aa6.91□□□□□ -1.3
TOPBP1-206ENST00000508524 SLC9A6Q92581 669 aa6.91□□□□□ -1.3
TOPBP1-206ENST00000508524 TMEM125Q96AQ2 219 aa6.91□□□□□ -1.3
TOPBP1-206ENST00000508524 VKORC1Q9BQB6 163 aa6.91□□□□□ -1.3
TOPBP1-206ENST00000508524 AIFM2Q9BRQ8 373 aa6.91□□□□□ -1.3
TOPBP1-206ENST00000508524 IMPG2Q9BZV3 1241 aa6.91□□□□□ -1.3
TOPBP1-206ENST00000508524 MAN1C1Q9NR34 630 aa6.91□□□□□ -1.3
TOPBP1-206ENST00000508524 SIDT1Q9NXL6 827 aaKnown RBP6.91□□□□□ -1.3
TOPBP1-206ENST00000508524 LUC7L2Q9Y383 392 aaKnown RBP6.91□□□□□ -1.3
TOPBP1-206ENST00000508524 SUN1O94901 812 aa6.9□□□□□ -1.3
TOPBP1-206ENST00000508524 NEK2P51955 445 aa6.9□□□□□ -1.3
TOPBP1-206ENST00000508524 ZNF844Q08AG5 666 aa6.9□□□□□ -1.3
TOPBP1-206ENST00000508524 ZNF169Q14929 603 aaPredicted RBP6.9□□□□□ -1.3
TOPBP1-206ENST00000508524 USP45Q70EL2 814 aa6.9□□□□□ -1.3
TOPBP1-206ENST00000508524 TMPRSS9Q7Z410 1059 aa6.9□□□□□ -1.3
TOPBP1-206ENST00000508524 CLNKQ7Z7G1 428 aa6.9□□□□□ -1.3
TOPBP1-206ENST00000508524 ZNF575Q86XF7 245 aa6.9□□□□□ -1.3
TOPBP1-206ENST00000508524 FAM177A1Q8N128 213 aaPredicted RBP6.9□□□□□ -1.3
TOPBP1-206ENST00000508524 C3orf20Q8ND61 904 aa6.9□□□□□ -1.3
TOPBP1-206ENST00000508524 SIMC1Q8NDZ2 872 aa6.9□□□□□ -1.3
TOPBP1-206ENST00000508524 NSUN7Q8NE18 718 aaKnown RBP6.9□□□□□ -1.3
TOPBP1-206ENST00000508524 LRIG1Q96JA1 1093 aa6.9□□□□□ -1.3
TOPBP1-206ENST00000508524 CCDC195A0A1B0GUA6 201 aa6.89□□□□□ -1.31
TOPBP1-206ENST00000508524 PRSS29PA6NIE9 313 aa6.89□□□□□ -1.31
TOPBP1-206ENST00000508524 DTNBO60941 627 aa6.89□□□□□ -1.31
TOPBP1-206ENST00000508524 PPFIA2O75334 1257 aa6.89□□□□□ -1.31
TOPBP1-206ENST00000508524 ANXA1P04083 346 aa6.89□□□□□ -1.31
TOPBP1-206ENST00000508524 POU2F2P09086 479 aa6.89□□□□□ -1.31
TOPBP1-206ENST00000508524 MC2RQ01718 297 aa6.89□□□□□ -1.31
TOPBP1-206ENST00000508524 SF3B3Q15393 1217 aaKnown RBP6.89□□□□□ -1.31
TOPBP1-206ENST00000508524 CATIPQ7Z7H3 387 aa6.89□□□□□ -1.31
TOPBP1-206ENST00000508524 PDSS2Q86YH6 399 aa6.89□□□□□ -1.31
TOPBP1-206ENST00000508524 SLC17A8Q8NDX2 589 aa6.89□□□□□ -1.31
TOPBP1-206ENST00000508524 TCF7L1Q9HCS4 588 aa6.89□□□□□ -1.31
TOPBP1-206ENST00000508524 FOXJ2Q9P0K8 574 aa6.89□□□□□ -1.31
TOPBP1-206ENST00000508524 POLHQ9Y253 713 aa6.89□□□□□ -1.31
TOPBP1-206ENST00000508524 MGST3O14880 152 aa6.88□□□□□ -1.31
TOPBP1-206ENST00000508524 GATA3P23771 443 aa6.88□□□□□ -1.31
TOPBP1-206ENST00000508524 PRDX5P30044 214 aa6.88□□□□□ -1.31
TOPBP1-206ENST00000508524 CYP2C19P33261 490 aa6.88□□□□□ -1.31
TOPBP1-206ENST00000508524 ANXA11P50995 505 aaKnown RBP6.88□□□□□ -1.31
TOPBP1-206ENST00000508524 HK3P52790 923 aa6.88□□□□□ -1.31
TOPBP1-206ENST00000508524 RPS7P62081 194 aaKnown RBP6.88□□□□□ -1.31
TOPBP1-206ENST00000508524 POU6F2P78424 691 aaPredicted RBP6.88□□□□□ -1.31
TOPBP1-206ENST00000508524 SIM1P81133 766 aaPredicted RBP6.88□□□□□ -1.31
TOPBP1-206ENST00000508524 PIGFQ07326 219 aa6.88□□□□□ -1.31
TOPBP1-206ENST00000508524 NOGQ13253 232 aa6.88□□□□□ -1.31
TOPBP1-206ENST00000508524 DYRK1AQ13627 763 aa6.88□□□□□ -1.31
TOPBP1-206ENST00000508524 CD300EQ496F6 205 aaPredicted RBP6.88□□□□□ -1.31
TOPBP1-206ENST00000508524 FAM90A1Q86YD7 464 aa6.88□□□□□ -1.31
TOPBP1-206ENST00000508524 AOPEPQ8N6M6 819 aa6.88□□□□□ -1.31
TOPBP1-206ENST00000508524 SCAMP4Q969E2 229 aa6.88□□□□□ -1.31
TOPBP1-206ENST00000508524 RGMAQ96B86 450 aa6.88□□□□□ -1.31
TOPBP1-206ENST00000508524 HSPBAP1Q96EW2 488 aa6.88□□□□□ -1.31
TOPBP1-206ENST00000508524 BBC3Q96PG8 261 aaPredicted RBP6.88□□□□□ -1.31
TOPBP1-206ENST00000508524 GTPBP4Q9BZE4 634 aaKnown RBP6.88□□□□□ -1.31
TOPBP1-206ENST00000508524 R3HDMLQ9H3Y0 253 aa6.88□□□□□ -1.31
TOPBP1-206ENST00000508524 INTS13Q9NVM9 706 aa6.88□□□□□ -1.31
TOPBP1-206ENST00000508524 RLIMQ9NVW2 624 aa6.88□□□□□ -1.31
TOPBP1-206ENST00000508524 DMTF1Q9Y222 760 aa6.88□□□□□ -1.31
TOPBP1-206ENST00000508524 NEU2Q9Y3R4 380 aa6.88□□□□□ -1.31
TOPBP1-206ENST00000508524 PCDHA3Q9Y5H8 950 aa6.88□□□□□ -1.31
TOPBP1-206ENST00000508524 SLC16A6O15403 523 aa6.87□□□□□ -1.31
TOPBP1-206ENST00000508524 IL33O95760 270 aa6.87□□□□□ -1.31
TOPBP1-206ENST00000508524 GJB1P08034 283 aa6.87□□□□□ -1.31
TOPBP1-206ENST00000508524 FTH1P19P0C7X4 201 aa6.87□□□□□ -1.31
TOPBP1-206ENST00000508524 SRGNP10124 158 aa6.87□□□□□ -1.31
TOPBP1-206ENST00000508524 PTH2RP49190 550 aa6.87□□□□□ -1.31
TOPBP1-206ENST00000508524 ERCC6LQ2NKX8 1250 aa6.87□□□□□ -1.31
TOPBP1-206ENST00000508524 STRIP1Q5VSL9 837 aa6.87□□□□□ -1.31
TOPBP1-206ENST00000508524 KIAA0895LQ68EN5 471 aa6.87□□□□□ -1.31
TOPBP1-206ENST00000508524 TAPT1Q6NXT6 567 aa6.87□□□□□ -1.31
TOPBP1-206ENST00000508524 ADGRG3Q86Y34 549 aa6.87□□□□□ -1.31
TOPBP1-206ENST00000508524 ADGRG5Q8IZF4 528 aa6.87□□□□□ -1.31
TOPBP1-206ENST00000508524 STAG1Q8WVM7 1258 aa6.87□□□□□ -1.31
TOPBP1-206ENST00000508524 PDLIM2Q96JY6 352 aa6.87□□□□□ -1.31
TOPBP1-206ENST00000508524 C1orf43Q9BWL3 253 aa6.87□□□□□ -1.31
TOPBP1-206ENST00000508524 BRD9Q9H8M2 597 aa6.87□□□□□ -1.31
TOPBP1-206ENST00000508524 TYW1Q9NV66 732 aaKnown RBP6.87□□□□□ -1.31
TOPBP1-206ENST00000508524 INSL6Q9Y581 213 aa6.87□□□□□ -1.31
TOPBP1-206ENST00000508524 ZNF785A8K8V0 405 aa6.86□□□□□ -1.31
TOPBP1-206ENST00000508524 PROM1O43490 865 aa6.86□□□□□ -1.31
TOPBP1-206ENST00000508524 ARIH2O95376 493 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms