RNA–Protein interactions for RNA: ENST00000508461.5

SMG7-214, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SMG7, Length 3,985 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-214ENST00000508461 TMEM121Q9BTD3 319 aa13.63□□□□□ -0.23
SMG7-214ENST00000508461 H0Y3Z8 333 aa13.63□□□□□ -0.23
SMG7-214ENST00000508461 ETS1P14921 441 aa13.63□□□□□ -0.23
SMG7-214ENST00000508461 CHRNB2P17787 502 aa13.63□□□□□ -0.23
SMG7-214ENST00000508461 SLC1A1P43005 524 aa13.63□□□□□ -0.23
SMG7-214ENST00000508461 NFX1Q12986 1120 aaKnown RBP13.63□□□□□ -0.23
SMG7-214ENST00000508461 EMC1Q8N766 993 aa13.63□□□□□ -0.23
SMG7-214ENST00000508461 OTUD5Q96G74 571 aa13.63□□□□□ -0.23
SMG7-214ENST00000508461 GGA3Q9NZ52 723 aa13.63□□□□□ -0.23
SMG7-214ENST00000508461 MAGED2Q9UNF1 606 aaPredicted RBP13.63□□□□□ -0.23
SMG7-214ENST00000508461 R3HDM2Q9Y2K5 976 aaKnown RBP13.63□□□□□ -0.23
SMG7-214ENST00000508461 CDH16O75309 829 aa13.63□□□□□ -0.23
SMG7-214ENST00000508461 CREB1P16220 341 aa13.63□□□□□ -0.23
SMG7-214ENST00000508461 TBXAS1P24557 533 aaPredicted RBP13.63□□□□□ -0.23
SMG7-214ENST00000508461 PHBP35232 272 aa13.63□□□□□ -0.23
SMG7-214ENST00000508461 HSD17B4P51659 736 aa13.63□□□□□ -0.23
SMG7-214ENST00000508461 CYB5D1Q6P9G0 228 aa13.63□□□□□ -0.23
SMG7-214ENST00000508461 FEZF2Q8TBJ5 459 aa13.63□□□□□ -0.23
SMG7-214ENST00000508461 KCNV2Q8TDN2 545 aa13.63□□□□□ -0.23
SMG7-214ENST00000508461 CFAP36Q96G28 342 aa13.63□□□□□ -0.23
SMG7-214ENST00000508461 BORCS6Q96GS4 357 aa13.63□□□□□ -0.23
SMG7-214ENST00000508461 KIAA1683Q9H0B3 1180 aa13.63□□□□□ -0.23
SMG7-214ENST00000508461 A0A0G2JND7 137 aa13.62□□□□□ -0.23
SMG7-214ENST00000508461 PLSCR1O15162 318 aa13.62□□□□□ -0.23
SMG7-214ENST00000508461 ZNF862O60290 1169 aa13.62□□□□□ -0.23
SMG7-214ENST00000508461 MYBL1P10243 752 aa13.62□□□□□ -0.23
SMG7-214ENST00000508461 MSH2P43246 934 aa13.62□□□□□ -0.23
SMG7-214ENST00000508461 MYL6P60660 151 aa13.62□□□□□ -0.23
SMG7-214ENST00000508461 DUOXA2Q1HG44 320 aa13.62□□□□□ -0.23
SMG7-214ENST00000508461 ZBTB41Q5SVQ8 909 aa13.62□□□□□ -0.23
SMG7-214ENST00000508461 CEP128Q6ZU80 1094 aa13.62□□□□□ -0.23
SMG7-214ENST00000508461 SPATA21Q7Z572 469 aa13.62□□□□□ -0.23
SMG7-214ENST00000508461 ZC3H3Q8IXZ2 948 aaKnown RBP13.62□□□□□ -0.23
SMG7-214ENST00000508461 CLEC4DQ8WXI8 215 aa13.62□□□□□ -0.23
SMG7-214ENST00000508461 TTC17Q96AE7 1141 aa13.62□□□□□ -0.23
SMG7-214ENST00000508461 GPRASP2Q96D09 838 aa13.62□□□□□ -0.23
SMG7-214ENST00000508461 ETNK1Q9HBU6 452 aa13.62□□□□□ -0.23
SMG7-214ENST00000508461 LRRC4CQ9HCJ2 640 aa13.62□□□□□ -0.23
SMG7-214ENST00000508461 USP15Q9Y4E8 981 aaPredicted RBP13.62□□□□□ -0.23
SMG7-214ENST00000508461 KIAA1551Q9HCM1 1747 aa13.62□□□□□ -0.23
SMG7-214ENST00000508461 BTAF1O14981 1849 aa13.62□□□□□ -0.23
SMG7-214ENST00000508461 MCF2LO15068 1137 aa13.62□□□□□ -0.23
SMG7-214ENST00000508461 NPM3O75607 178 aaKnown RBP13.62□□□□□ -0.23
SMG7-214ENST00000508461 OATP04181 439 aa13.62□□□□□ -0.23
SMG7-214ENST00000508461 PTGER2P43116 358 aa13.62□□□□□ -0.23
SMG7-214ENST00000508461 MYO1EQ12965 1108 aa13.62□□□□□ -0.23
SMG7-214ENST00000508461 TMC2Q8TDI7 906 aa13.62□□□□□ -0.23
SMG7-214ENST00000508461 FIZ1Q96SL8 496 aa13.62□□□□□ -0.23
SMG7-214ENST00000508461 RPF1Q9H9Y2 349 aaKnown RBP13.62□□□□□ -0.23
SMG7-214ENST00000508461 A1CFQ9NQ94 594 aaKnown RBP13.62□□□□□ -0.23
SMG7-214ENST00000508461 O00370 1275 aa13.62□□□□□ -0.23
SMG7-214ENST00000508461 PROSCO94903 275 aa13.62□□□□□ -0.23
SMG7-214ENST00000508461 PRKCBP05771 671 aa13.62□□□□□ -0.23
SMG7-214ENST00000508461 INHBAP08476 426 aa13.62□□□□□ -0.23
SMG7-214ENST00000508461 KRT3P12035 628 aa13.62□□□□□ -0.23
SMG7-214ENST00000508461 RAP1GAPP47736 663 aa13.62□□□□□ -0.23
SMG7-214ENST00000508461 GPC3P51654 580 aa13.62□□□□□ -0.23
SMG7-214ENST00000508461 RPL7AP62424 266 aaKnown RBP13.62□□□□□ -0.23
SMG7-214ENST00000508461 AUHQ13825 339 aaKnown RBP13.62□□□□□ -0.23
SMG7-214ENST00000508461 KCTD2Q14681 263 aa13.62□□□□□ -0.23
SMG7-214ENST00000508461 ANKRD20A3Q5VUR7 823 aa13.62□□□□□ -0.23
SMG7-214ENST00000508461 OR5B17Q8NGF7 314 aa13.62□□□□□ -0.23
SMG7-214ENST00000508461 HELQQ8TDG4 1101 aa13.62□□□□□ -0.23
SMG7-214ENST00000508461 PRPF31Q8WWY3 499 aaKnown RBP13.62□□□□□ -0.23
SMG7-214ENST00000508461 N4BP2L2Q92802 583 aaPredicted RBP13.62□□□□□ -0.23
SMG7-214ENST00000508461 MRPL4Q9BYD3 311 aaKnown RBP13.62□□□□□ -0.23
SMG7-214ENST00000508461 TRIM6Q9C030 488 aaPredicted RBP13.62□□□□□ -0.23
SMG7-214ENST00000508461 TRABDQ9H4I3 376 aa13.62□□□□□ -0.23
SMG7-214ENST00000508461 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.62□□□□□ -0.23
SMG7-214ENST00000508461 DDX60LQ5H9U9 1706 aaKnown RBP13.62□□□□□ -0.23
SMG7-214ENST00000508461 M0QYV0 167 aa13.61□□□□□ -0.23
SMG7-214ENST00000508461 TTC4O95801 387 aa13.61□□□□□ -0.23
SMG7-214ENST00000508461 CALB1P05937 261 aa13.61□□□□□ -0.23
SMG7-214ENST00000508461 ANKRD20A8PQ5CZ79 823 aa13.61□□□□□ -0.23
SMG7-214ENST00000508461 PDIK1LQ8N165 341 aa13.61□□□□□ -0.23
SMG7-214ENST00000508461 CCDC33Q8N5R6 958 aa13.61□□□□□ -0.23
SMG7-214ENST00000508461 DCLK3Q9C098 648 aa13.61□□□□□ -0.23
SMG7-214ENST00000508461 GPR88Q9GZN0 384 aa13.61□□□□□ -0.23
SMG7-214ENST00000508461 F8VP50 259 aa13.61□□□□□ -0.23
SMG7-214ENST00000508461 CST8O60676 142 aa13.61□□□□□ -0.23
SMG7-214ENST00000508461 UBOX5O94941 541 aa13.61□□□□□ -0.23
SMG7-214ENST00000508461 PGK2P07205 417 aa13.61□□□□□ -0.23
SMG7-214ENST00000508461 ECHS1P30084 290 aa13.61□□□□□ -0.23
SMG7-214ENST00000508461 TAS2R40P59535 323 aa13.61□□□□□ -0.23
SMG7-214ENST00000508461 FAM102AQ5T9C2 384 aaPredicted RBP13.61□□□□□ -0.23
SMG7-214ENST00000508461 TDRD10Q5VZ19 366 aaKnown RBP13.61□□□□□ -0.23
SMG7-214ENST00000508461 C1orf228Q6PIY5 440 aa13.61□□□□□ -0.23
SMG7-214ENST00000508461 VSIG10LQ86VR7 867 aa13.61□□□□□ -0.23
SMG7-214ENST00000508461 TRAPPC12Q8WVT3 735 aa13.61□□□□□ -0.23
SMG7-214ENST00000508461 ABCF3Q9NUQ8 709 aa13.61□□□□□ -0.23
SMG7-214ENST00000508461 DNPEPQ9ULA0 475 aa13.61□□□□□ -0.23
SMG7-214ENST00000508461 LAMB1P07942 1786 aa13.61□□□□□ -0.23
SMG7-214ENST00000508461 TROVE2P10155 538 aaKnown RBP eCLIP13.61□□□□□ -0.23
SMG7-214ENST00000508461 MAPTP10636 758 aaKnown RBP13.61□□□□□ -0.23
SMG7-214ENST00000508461 RGS7P49802 495 aa13.61□□□□□ -0.23
SMG7-214ENST00000508461 SPARCL1Q14515 664 aa13.61□□□□□ -0.23
SMG7-214ENST00000508461 UBAP2Q5T6F2 1119 aaKnown RBP13.61□□□□□ -0.23
SMG7-214ENST00000508461 MFSD7Q6UXD7 560 aa13.61□□□□□ -0.23
SMG7-214ENST00000508461 SULF1Q8IWU6 871 aa13.61□□□□□ -0.23
SMG7-214ENST00000508461 ZNF606Q8WXB4 792 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms