RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 CDH23Q9H251 3354 aa16.17■□□□□ 0.18
RNF4-210ENST00000508235 KPNA7A9QM74 516 aa16.17■□□□□ 0.18
RNF4-210ENST00000508235 PPP1R3GB7ZBB8 358 aa16.17■□□□□ 0.18
RNF4-210ENST00000508235 PPEF2O14830 753 aa16.17■□□□□ 0.18
RNF4-210ENST00000508235 SLC16A3O15427 465 aaKnown RBP16.17■□□□□ 0.18
RNF4-210ENST00000508235 AKAP3O75969 853 aa16.17■□□□□ 0.18
RNF4-210ENST00000508235 ODC1P11926 461 aa16.17■□□□□ 0.18
RNF4-210ENST00000508235 TYMPP19971 482 aa16.17■□□□□ 0.18
RNF4-210ENST00000508235 KCNA5P22460 613 aa16.17■□□□□ 0.18
RNF4-210ENST00000508235 IGFBP6P24592 240 aaPredicted RBP16.17■□□□□ 0.18
RNF4-210ENST00000508235 CLCN4P51793 760 aa16.17■□□□□ 0.18
RNF4-210ENST00000508235 VAMP7P51809 220 aa16.17■□□□□ 0.18
RNF4-210ENST00000508235 CLDN10P78369 228 aa16.17■□□□□ 0.18
RNF4-210ENST00000508235 YWHAHQ04917 246 aaPredicted RBP16.17■□□□□ 0.18
RNF4-210ENST00000508235 PAK1Q13153 545 aa16.17■□□□□ 0.18
RNF4-210ENST00000508235 KCNC3Q14003 757 aa16.17■□□□□ 0.18
RNF4-210ENST00000508235 PUS10Q3MIT2 529 aaKnown RBP16.17■□□□□ 0.18
RNF4-210ENST00000508235 VARS2Q5ST30 1063 aaKnown RBP16.17■□□□□ 0.18
RNF4-210ENST00000508235 KLHL10Q6JEL2 608 aa16.17■□□□□ 0.18
RNF4-210ENST00000508235 OR5B17Q8NGF7 314 aa16.17■□□□□ 0.18
RNF4-210ENST00000508235 SLC22A17Q8WUG5 538 aa16.17■□□□□ 0.18
RNF4-210ENST00000508235 NELFBQ8WX92 580 aa16.17■□□□□ 0.18
RNF4-210ENST00000508235 CEP63Q96MT8 703 aa16.17■□□□□ 0.18
RNF4-210ENST00000508235 DZANK1Q9NVP4 752 aa16.17■□□□□ 0.18
RNF4-210ENST00000508235 MTRRQ9UBK8 725 aa16.17■□□□□ 0.18
RNF4-210ENST00000508235 DACH1Q9UI36 760 aa16.17■□□□□ 0.18
RNF4-210ENST00000508235 MTCL1Q9Y4B5 1905 aaKnown RBP16.17■□□□□ 0.18
RNF4-210ENST00000508235 PTPRJQ12913 1337 aa16.17■□□□□ 0.18
RNF4-210ENST00000508235 LINC01565O15544 149 aa16.16■□□□□ 0.18
RNF4-210ENST00000508235 STX10O60499 249 aa16.16■□□□□ 0.18
RNF4-210ENST00000508235 PHACTR2O75167 634 aa16.16■□□□□ 0.18
RNF4-210ENST00000508235 FGFR1OPO95684 399 aaKnown RBP16.16■□□□□ 0.18
RNF4-210ENST00000508235 GLUD1P00367 558 aa16.16■□□□□ 0.18
RNF4-210ENST00000508235 CD44P16070 742 aaKnown RBP16.16■□□□□ 0.18
RNF4-210ENST00000508235 HOXB8P17481 243 aaPredicted RBP16.16■□□□□ 0.18
RNF4-210ENST00000508235 PMS1P54277 932 aaKnown RBP16.16■□□□□ 0.18
RNF4-210ENST00000508235 MRPS5P82675 430 aaKnown RBP16.16■□□□□ 0.18
RNF4-210ENST00000508235 BFSP1Q12934 665 aa16.16■□□□□ 0.18
RNF4-210ENST00000508235 TRPC3Q13507 836 aa16.16■□□□□ 0.18
RNF4-210ENST00000508235 LEXMQ3ZCV2 418 aa16.16■□□□□ 0.18
RNF4-210ENST00000508235 CTXN3Q4LDR2 81 aa16.16■□□□□ 0.18
RNF4-210ENST00000508235 LMBRD2Q68DH5 695 aaPredicted RBP16.16■□□□□ 0.18
RNF4-210ENST00000508235 ZNF280DQ6N043 979 aa16.16■□□□□ 0.18
RNF4-210ENST00000508235 LLGL2Q6P1M3 1020 aa16.16■□□□□ 0.18
RNF4-210ENST00000508235 TRAPPC11Q7Z392 1133 aa16.16■□□□□ 0.18
RNF4-210ENST00000508235 METTL23Q86XA0 190 aa16.16■□□□□ 0.18
RNF4-210ENST00000508235 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.16■□□□□ 0.18
RNF4-210ENST00000508235 ZC3H3Q8IXZ2 948 aaKnown RBP16.16■□□□□ 0.18
RNF4-210ENST00000508235 SENP8Q96LD8 212 aa16.16■□□□□ 0.18
RNF4-210ENST00000508235 POP1Q99575 1024 aaKnown RBP16.16■□□□□ 0.18
RNF4-210ENST00000508235 CTNND2Q9UQB3 1225 aa16.16■□□□□ 0.18
RNF4-210ENST00000508235 FAM50BQ9Y247 325 aa16.16■□□□□ 0.18
RNF4-210ENST00000508235 PLXNA3P51805 1871 aa16.16■□□□□ 0.18
RNF4-210ENST00000508235 TRIM49BA6NDI0 452 aa16.15■□□□□ 0.18
RNF4-210ENST00000508235 LRRIQ3A6PVS8 624 aaPredicted RBP16.15■□□□□ 0.18
RNF4-210ENST00000508235 CYB561D2O14569 222 aa16.15■□□□□ 0.18
RNF4-210ENST00000508235 TBX10O75333 385 aa16.15■□□□□ 0.18
RNF4-210ENST00000508235 OAZ2O95190 189 aa16.15■□□□□ 0.18
RNF4-210ENST00000508235 GLP2RO95838 553 aa16.15■□□□□ 0.18
RNF4-210ENST00000508235 CYP11A1P05108 521 aa16.15■□□□□ 0.18
RNF4-210ENST00000508235 LTBRP36941 435 aa16.15■□□□□ 0.18
RNF4-210ENST00000508235 BIRC3Q13489 604 aa16.15■□□□□ 0.18
RNF4-210ENST00000508235 MRPL58Q14197 206 aaKnown RBP16.15■□□□□ 0.18
RNF4-210ENST00000508235 ANKRD54Q6NXT1 300 aa16.15■□□□□ 0.18
RNF4-210ENST00000508235 TMEM130Q8N3G9 435 aa16.15■□□□□ 0.18
RNF4-210ENST00000508235 CXorf38Q8TB03 319 aa16.15■□□□□ 0.18
RNF4-210ENST00000508235 HDAC7Q8WUI4 952 aa16.15■□□□□ 0.18
RNF4-210ENST00000508235 SYAP1Q96A49 352 aaPredicted RBP16.15■□□□□ 0.18
RNF4-210ENST00000508235 HPDLQ96IR7 371 aa16.15■□□□□ 0.18
RNF4-210ENST00000508235 CLSTN3Q9BQT9 956 aa16.15■□□□□ 0.18
RNF4-210ENST00000508235 METTL14Q9HCE5 456 aaKnown RBP16.15■□□□□ 0.18
RNF4-210ENST00000508235 PRDM6Q9NQX0 595 aa16.15■□□□□ 0.18
RNF4-210ENST00000508235 GDAP2Q9NXN4 497 aa16.15■□□□□ 0.18
RNF4-210ENST00000508235 SIX4Q9UIU6 781 aa16.15■□□□□ 0.18
RNF4-210ENST00000508235 CD207Q9UJ71 328 aa16.15■□□□□ 0.18
RNF4-210ENST00000508235 BARX2Q9UMQ3 279 aaPredicted RBP16.15■□□□□ 0.18
RNF4-210ENST00000508235 SPDYE4A6NLX3 237 aa16.14■□□□□ 0.17
RNF4-210ENST00000508235 SPTLC1O15269 473 aa16.14■□□□□ 0.17
RNF4-210ENST00000508235 HUS1O60921 280 aa16.14■□□□□ 0.17
RNF4-210ENST00000508235 RPL17P18621 184 aaKnown RBP16.14■□□□□ 0.17
RNF4-210ENST00000508235 ATICP31939 592 aa16.14■□□□□ 0.17
RNF4-210ENST00000508235 RAB33AQ14088 237 aa16.14■□□□□ 0.17
RNF4-210ENST00000508235 CT47A1Q5JQC4 288 aaPredicted RBP16.14■□□□□ 0.17
RNF4-210ENST00000508235 CCDC183Q5T5S1 534 aa16.14■□□□□ 0.17
RNF4-210ENST00000508235 OVOS1Q6IE37 1185 aa16.14■□□□□ 0.17
RNF4-210ENST00000508235 SLC8B1Q6J4K2 584 aa16.14■□□□□ 0.17
RNF4-210ENST00000508235 TTI2Q6NXR4 508 aa16.14■□□□□ 0.17
RNF4-210ENST00000508235 PALB2Q86YC2 1186 aa16.14■□□□□ 0.17
RNF4-210ENST00000508235 GLYCTKQ8IVS8 523 aa16.14■□□□□ 0.17
RNF4-210ENST00000508235 THEM5Q8N1Q8 247 aa16.14■□□□□ 0.17
RNF4-210ENST00000508235 VN1R2Q8NFZ6 395 aa16.14■□□□□ 0.17
RNF4-210ENST00000508235 SPATA18Q8TC71 538 aa16.14■□□□□ 0.17
RNF4-210ENST00000508235 PLEKHO2Q8TD55 490 aa16.14■□□□□ 0.17
RNF4-210ENST00000508235 ZNF516Q92618 1163 aa16.14■□□□□ 0.17
RNF4-210ENST00000508235 GZF1Q9H116 711 aaPredicted RBP16.14■□□□□ 0.17
RNF4-210ENST00000508235 PLEKHA4Q9H4M7 779 aa16.14■□□□□ 0.17
RNF4-210ENST00000508235 CLEC1BQ9P126 229 aa16.14■□□□□ 0.17
RNF4-210ENST00000508235 RWDD2AQ9UIY3 292 aa16.14■□□□□ 0.17
RNF4-210ENST00000508235 FBXL5Q9UKA1 691 aa16.14■□□□□ 0.17
RNF4-210ENST00000508235 CDY1Q9Y6F8 540 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms