RNA–Protein interactions for RNA: ENST00000507689.1

COL1A1-211, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 549 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-211ENST00000507689 XXYLT1Q8NBI6 393 aa16.9■□□□□ 0.3
COL1A1-211ENST00000507689 ZNF461Q8TAF7 563 aa16.9■□□□□ 0.3
COL1A1-211ENST00000507689 SCFD1Q8WVM8 642 aa16.9■□□□□ 0.3
COL1A1-211ENST00000507689 RHOBTB2Q9BYZ6 727 aa16.9■□□□□ 0.3
COL1A1-211ENST00000507689 PRKD2Q9BZL6 878 aa16.9■□□□□ 0.3
COL1A1-211ENST00000507689 AGPAT3Q9NRZ7 376 aa16.9■□□□□ 0.3
COL1A1-211ENST00000507689 MAFFQ9ULX9 164 aa16.9■□□□□ 0.3
COL1A1-211ENST00000507689 USTQ9Y2C2 406 aa16.9■□□□□ 0.3
COL1A1-211ENST00000507689 A0A0C4DFX4 3053 aa16.89■□□□□ 0.29
COL1A1-211ENST00000507689 OR6C75A6NL08 312 aa16.89■□□□□ 0.29
COL1A1-211ENST00000507689 M0QZQ0 153 aa16.89■□□□□ 0.29
COL1A1-211ENST00000507689 EXOC3O60645 756 aa16.89■□□□□ 0.29
COL1A1-211ENST00000507689 RFPL2O75678 378 aa16.89■□□□□ 0.29
COL1A1-211ENST00000507689 LRG1P02750 347 aa16.89■□□□□ 0.29
COL1A1-211ENST00000507689 TYMPP19971 482 aa16.89■□□□□ 0.29
COL1A1-211ENST00000507689 HOXA9P31269 272 aa16.89■□□□□ 0.29
COL1A1-211ENST00000507689 MYO1EQ12965 1108 aa16.89■□□□□ 0.29
COL1A1-211ENST00000507689 BMT2Q1RMZ1 405 aa16.89■□□□□ 0.29
COL1A1-211ENST00000507689 OVOS1Q6IE37 1185 aa16.89■□□□□ 0.29
COL1A1-211ENST00000507689 SLC8B1Q6J4K2 584 aa16.89■□□□□ 0.29
COL1A1-211ENST00000507689 GLIS3Q8NEA6 775 aa16.89■□□□□ 0.29
COL1A1-211ENST00000507689 SLC7A14Q8TBB6 771 aa16.89■□□□□ 0.29
COL1A1-211ENST00000507689 SENP8Q96LD8 212 aa16.89■□□□□ 0.29
COL1A1-211ENST00000507689 CD320Q9NPF0 282 aa16.89■□□□□ 0.29
COL1A1-211ENST00000507689 RMND1Q9NWS8 449 aa16.89■□□□□ 0.29
COL1A1-211ENST00000507689 FBXL5Q9UKA1 691 aa16.89■□□□□ 0.29
COL1A1-211ENST00000507689 ITGA11Q9UKX5 1188 aa16.89■□□□□ 0.29
COL1A1-211ENST00000507689 TRIP11Q15643 1979 aa16.89■□□□□ 0.29
COL1A1-211ENST00000507689 PI4K2BG5E9Z4 385 aa16.88■□□□□ 0.29
COL1A1-211ENST00000507689 PIRO00625 290 aa16.88■□□□□ 0.29
COL1A1-211ENST00000507689 CLIC2O15247 247 aa16.88■□□□□ 0.29
COL1A1-211ENST00000507689 CALUO43852 315 aaPredicted RBP16.88■□□□□ 0.29
COL1A1-211ENST00000507689 CLSTN1O94985 981 aa16.88■□□□□ 0.29
COL1A1-211ENST00000507689 SMC2O95347 1197 aa16.88■□□□□ 0.29
COL1A1-211ENST00000507689 TNNI1P19237 187 aa16.88■□□□□ 0.29
COL1A1-211ENST00000507689 GBP2P32456 591 aaPredicted RBP16.88■□□□□ 0.29
COL1A1-211ENST00000507689 RBP5P82980 135 aa16.88■□□□□ 0.29
COL1A1-211ENST00000507689 ROR1Q01973 937 aa16.88■□□□□ 0.29
COL1A1-211ENST00000507689 EHHADHQ08426 723 aa16.88■□□□□ 0.29
COL1A1-211ENST00000507689 SNRNP35Q16560 246 aaKnown RBP16.88■□□□□ 0.29
COL1A1-211ENST00000507689 DUOXA2Q1HG44 320 aa16.88■□□□□ 0.29
COL1A1-211ENST00000507689 CSGALNACT2Q8N6G5 542 aa16.88■□□□□ 0.29
COL1A1-211ENST00000507689 RDH13Q8NBN7 331 aa16.88■□□□□ 0.29
COL1A1-211ENST00000507689 CYP4F11Q9HBI6 524 aa16.88■□□□□ 0.29
COL1A1-211ENST00000507689 PDE11AQ9HCR9 933 aa16.88■□□□□ 0.29
COL1A1-211ENST00000507689 WDR6Q9NNW5 1121 aaKnown RBP16.88■□□□□ 0.29
COL1A1-211ENST00000507689 AGAP1Q9UPQ3 857 aa16.88■□□□□ 0.29
COL1A1-211ENST00000507689 CLUHO75153 1309 aa16.88■□□□□ 0.29
COL1A1-211ENST00000507689 ANO9A1A5B4 782 aa16.87■□□□□ 0.29
COL1A1-211ENST00000507689 KPNA7A9QM74 516 aa16.87■□□□□ 0.29
COL1A1-211ENST00000507689 CYB561D2O14569 222 aa16.87■□□□□ 0.29
COL1A1-211ENST00000507689 ADAM12O43184 909 aa16.87■□□□□ 0.29
COL1A1-211ENST00000507689 HUS1O60921 280 aa16.87■□□□□ 0.29
COL1A1-211ENST00000507689 OAZ2O95190 189 aa16.87■□□□□ 0.29
COL1A1-211ENST00000507689 ITGB3P05106 788 aa16.87■□□□□ 0.29
COL1A1-211ENST00000507689 IGFBP6P24592 240 aaPredicted RBP16.87■□□□□ 0.29
COL1A1-211ENST00000507689 AARSP49588 968 aaKnown RBP eCLIP16.87■□□□□ 0.29
COL1A1-211ENST00000507689 FAM160A1Q05DH4 1040 aa16.87■□□□□ 0.29
COL1A1-211ENST00000507689 TMEM31Q5JXX7 168 aa16.87■□□□□ 0.29
COL1A1-211ENST00000507689 EFCAB13Q8IY85 973 aa16.87■□□□□ 0.29
COL1A1-211ENST00000507689 GTPBP4Q9BZE4 634 aaKnown RBP16.87■□□□□ 0.29
COL1A1-211ENST00000507689 GOLPH3LQ9H4A5 285 aa16.87■□□□□ 0.29
COL1A1-211ENST00000507689 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.87■□□□□ 0.29
COL1A1-211ENST00000507689 MUTYHQ9UIF7 546 aa16.87■□□□□ 0.29
COL1A1-211ENST00000507689 CDH22Q9UJ99 828 aa16.87■□□□□ 0.29
COL1A1-211ENST00000507689 FRMD4BQ9Y2L6 1034 aa16.87■□□□□ 0.29
COL1A1-211ENST00000507689 TIMM13Q9Y5L4 95 aaPredicted RBP16.87■□□□□ 0.29
COL1A1-211ENST00000507689 C2CD4DB7Z1M9 353 aa16.86■□□□□ 0.29
COL1A1-211ENST00000507689 CCL16O15467 120 aa16.86■□□□□ 0.29
COL1A1-211ENST00000507689 TGFB1I1O43294 461 aa16.86■□□□□ 0.29
COL1A1-211ENST00000507689 KLRC4O43908 158 aa16.86■□□□□ 0.29
COL1A1-211ENST00000507689 KINO60870 393 aaKnown RBP16.86■□□□□ 0.29
COL1A1-211ENST00000507689 DLATP10515 647 aaKnown RBP16.86■□□□□ 0.29
COL1A1-211ENST00000507689 ATF2P15336 505 aa16.86■□□□□ 0.29
COL1A1-211ENST00000507689 POLR2BP30876 1174 aaKnown RBP16.86■□□□□ 0.29
COL1A1-211ENST00000507689 BFSP1Q12934 665 aa16.86■□□□□ 0.29
COL1A1-211ENST00000507689 STK4Q13043 487 aa16.86■□□□□ 0.29
COL1A1-211ENST00000507689 PLD1Q13393 1074 aa16.86■□□□□ 0.29
COL1A1-211ENST00000507689 MRPL58Q14197 206 aaKnown RBP16.86■□□□□ 0.29
COL1A1-211ENST00000507689 IQCEQ6IPM2 695 aa16.86■□□□□ 0.29
COL1A1-211ENST00000507689 CBWD2Q8IUF1 395 aa16.86■□□□□ 0.29
COL1A1-211ENST00000507689 WDR49Q8IV35 697 aa16.86■□□□□ 0.29
COL1A1-211ENST00000507689 ZDHHC14Q8IZN3 488 aa16.86■□□□□ 0.29
COL1A1-211ENST00000507689 LRRC52Q8N7C0 313 aa16.86■□□□□ 0.29
COL1A1-211ENST00000507689 CCDC127Q96BQ5 260 aa16.86■□□□□ 0.29
COL1A1-211ENST00000507689 EPHX3Q9H6B9 360 aa16.86■□□□□ 0.29
COL1A1-211ENST00000507689 CHMP5Q9NZZ3 219 aa16.86■□□□□ 0.29
COL1A1-211ENST00000507689 AFF4Q9UHB7 1163 aaKnown RBP16.86■□□□□ 0.29
COL1A1-211ENST00000507689 PDCD11Q14690 1871 aaKnown RBP16.86■□□□□ 0.29
COL1A1-211ENST00000507689 XIRP2A4UGR9 3374 aa16.86■□□□□ 0.29
COL1A1-211ENST00000507689 CUL9Q8IWT3 2517 aa16.85■□□□□ 0.29
COL1A1-211ENST00000507689 WDR27A2RRH5 827 aa16.85■□□□□ 0.29
COL1A1-211ENST00000507689 PDXKO00764 312 aa16.85■□□□□ 0.29
COL1A1-211ENST00000507689 PPEF2O14830 753 aa16.85■□□□□ 0.29
COL1A1-211ENST00000507689 PHACTR2O75167 634 aa16.85■□□□□ 0.29
COL1A1-211ENST00000507689 ABLIM3O94929 683 aa16.85■□□□□ 0.29
COL1A1-211ENST00000507689 RHOBTB3O94955 611 aa16.85■□□□□ 0.29
COL1A1-211ENST00000507689 FSHRP23945 695 aa16.85■□□□□ 0.29
COL1A1-211ENST00000507689 RPL13P26373 211 aaKnown RBP16.85■□□□□ 0.29
COL1A1-211ENST00000507689 HOXD13P35453 343 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms